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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0458600 |
| Transcript ID | LotjaGi2g1v0458600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|G7K104|G7K104_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi2g1v0458600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95215180..95220355) extracted from Lotus japonicus Gifu genome v1.2.
TATATTGGATTGAATGTGTTTTCAATTTGATCTCAACTTGAATCTAAACCCTTTCTTAATTGAACTTTAATCTAAATTCA TGAGTTTTTCTTTTCTTCAAATGTGGGCTAAATCCGCTTTCACTTATGTCAACGCCCAGAGTCTCATAAGAAAATCATTG TTGAGGTTCTGCTAAATCCGCTTTCTCTTCTCAAGAATCCATAAAACCATGAATTTAGGTAATAGCTTGTTGGTTATCTA TGCTTCAAAGGCCTAGTTATCTTAACTTTATCCACTCTTAAATGTAATTGTCATCTTTTGGCCAAAAAGGTGATCGATGT GATACATGATACTATTGGGACCATGAACAGAGATACACCTTCAGCTAAGCTTTCGCTAATCATTTTCATGTTACTTATCC ATAAAATTTCTGGAGCAGACCCTGTTGATACTTATTGTCCAAATGAATTCCCATTTTACACTCCCAACAGTTCATTCCAC AAGAACCTTAAGCTTCTCATGGAATCGCTATCCTCCAATACCGCTTCAAAGACAGGTTTCTACAATACATCTGTCGGAGA AGGACGAGACAAAGTGTATGGACAAGCACTCTGCAGAGGAGACATCACAAACTCCACAATGGTTTGCCAGCAATGCATTC AGAAAGCAAGCCAAGATATCATGAACAGGTGCGGCTATATAATATAAAACATTTATATGTAATTTAACCATTCACTTGTG ACTAAGTATTCTAATAAAAACTTAATTTAAGCACAAGGTACATAGACTTTGTGCATTGTCCACGCTTCAAGCCTAAGGGC TTCTGCCTGAGGAGACGCGTTAGAAATTATTCATGTGTCATTTATACAGCAGTTTAAACTTTGGGGATAATTGGATCCTG ACAGGTGCAGCAGTGAAGATGCAATGATATGGTATGAGTTTTGCCAAGTTCGGTACTCCTTTCAGATGTTTTTCTCACGC TCAGTTTATACTGGAAAATATCCACAGCAGAATGATCAGGAGAAGAATGTCTCAGATCCTATTCGATTTGAACAACACGT GACTTATTTAATGAACAATCTCTCAGATGAAGCTGCTTTTAATCCTGCCAAAAACATGTTTGCAGCTGGGGAAATTAGGT CTCCAGGGAAAAGGACAATAGTTTATGGGCTTGTCCAATGTACCAGGGACATGTCTGGAACAGACTGCAGTAGTTGTTTA AGTTCTGCATTAACAGAACTTACAACATGCTGCTCGAGAAGAGAAGGAGGGATTATTGTCAGTAGAAATTGCAATGTTAG GTTTGATTTGTCCAAGTTCTTCAACACTTCATCAGCATACTTGTTGACTTATCCAACATCCAAAGGTATAGTAAGGCTTT TCCATCTGAAAATGTGTGTGTGTGTGTTTGTATTTCAAGAAGGAACTAATATAAGCTTCTCTTGATTTACAAGGAGGAGG GAAATGGAAGCCCTGGATGTTTGTGTTGACTATATGTGGCTCAATTTTAATATTAGCAGTTGTTGTTGGGTTGTGCACTG CTTGCCTCAGGAGAAGAAATGATAGAGACAGAGGTAAACTTCTATAATTGAAATCCATTAGCTATATTCATAAGAACATA TCAGAACTCAGTTCTATTTTACTTAAATATGAAATGAATCAGATGAAGAAAAGAGTGAAAGGATGATATTGCAAGATTTA GTTAGCCCCAGACATGTAGCAATTACCCAAGAAGGTGAGTTGATTAGTTCTGATGAAATGTTGTTCATGACCTTAGCAAC CATTAAAGCAGCTACTGGTGACTTTTCTGATAGAAATAAGCTGGGACAAGGAGGGTTTGGTGAAGTATACAAGGTCATAC ACTCATGCATTTCACTAAAATAAAATTCCTTTTGGGATGTGTACTTGTAGGGCCTAGTTAACATGTTTGATTTCGTTGCA GGGTGTTCTGTCAGATGGTAATGAAATTGCAGTAAAAAGATTATCAAGGAAGTCTTGGCAAGGCATGGAGGAATTCAAAA ATGAGATCATGCTCATTGCCAAACTTCAACACAGGAATCTGGTGAGGCTGTTGGGTTGTGTCTTGGAGGGAGACGAAAGA ATGCTTGTATATGAGTTCATGTCAAACAAAAGCCTTGATCAATTTATCTTTGGTTTGTTCTGTTGCTCACTTTTCAATTT TCATAAAGCCTTCTACATGTATCTTATATTTGGCTCTTGTTCTTTGTAATTCAAGATGCAGGAAAACGTCCCAGACTTGA TTGGAAAACATGCCAAGGTATTATCAATGGCATAGCCAGAGGACTAGTTTATCTTCACGAGGAGTCTCGCCTTAAAATCA TTCACCGAGACCTAAAGCCAAATAATGTGTTGCTAGATCATGAACTGGTTGCTAAAATATCAGATTTTGGCATGGCCAGG ATATTTTCTGAGAATCAGAATGCAGCTAATACCAAAAGAGTTGTGGGAACATAGTAAGCCAACTTCCACTCACCCATCTT TTATTTCCCCTTTTAGTATTTTTATTCCAGATTATTTTCCATTAACTTGACTATGAATCCTGATGTATAAAACAGTGGAT ATATGGCTCCAGAGTATGCAATGGAGGGATTGTTCTCTGTAAAATCTGATGTCTTCAGCTTTGGTGTTATCTTGCTTGAA ATCATTAGTGGGAAAAGAAATAACGGCTTTTACTTAACCGAACTTGCCCCAACACTTCTTGCACATGTAATTTCATCAAC CAAACACTTGATTCAAGTCAGTAAATCTTCAAAATACATAATTCTGTTTATTCAAATTGTGACAGGCGTGGCAGCTGTGG AATGAAGGAAAAGAATCGGAATTTGTGGATCCCTTGTTACGGGAATCATGTCTTGCTTCTGAACCTGAAGTTCTGAGGTG CGTGCACATTGGACTTCTGTGCGTGCAGCAAGATCCAGAAGACAGACCCACCATGTCAGATGTGGTGGCTCTCCTGGGAA GTGAATCAACGGTTCTTCCCCAACCAAGCAAACCATCTTTTCCTTTGCGTAGGGTGCATCATGTAGATCCATCAGCATCA ACAAATCCTTCAGTGAGTGAGATGATGTGGTCTAGTGTTTTGCCACGATGATTGATCTTGTGACAATAGAGGGGTGCTAG CATTTTAATTACCACAACATTCTTGACAGTAGCATAGATAGAAACTAGAACAGACATGCTTTTATGGGTAGTAACACACC ATGACCATACCATATATATACTCGTGTGGGGAAATCATGTTATAATAAGATCCCAACTCAAGGCTTGTCTACTTGAAAGA AATCAAATGTGACACACGTTGAATCTTTTACATTTTCTTATTGATGAATCTTTTACATTTTCTTATTGATGACAACCTTG ACTCATGTTGCTTGAAGATGCAATCTTGGATTGAATCTCACTTACGAAACATATTAGGATTACACTTAAATAAGAATTCA AAATTCCACAGCAGGGTTCGCTGAAGAACTTTGGGTTGCGGTTTTTATCGTTGTCACCAGCTTCCAAATGTTTAATGGAA GGAGCACATGCTCCCATGTCACAAAAAATCACTTCCCTCGACGAGAACTAACATAAAAAAATAATAATAATAAACCACCA ATCATTAACAATATAGTCTTGAAAAGGTTTTTTGTTAAAAAATAAATAAATCTACATGAGCTTCACTTGAGATCTCTTAA AGAAGATACGGTCATAGTGATCAATCTGCTGTTAAATGGATCAATGAGCTAAGAGGCTTTCTTGGGAGGAGACATGTTAA AAATAAGGGAAAGAACTGCTTTGGTGGTACAAATCTTGAACAACAATAGAGTGAGCAGATATAACAGCAAACCTGCGAGA GGTAAAAGATCGGTTAATACTACAAATTACAACAATTACAAGACCAATTCGCACAACATGAACAAAATATTTAAAAATAA AACTCACCAGCTTGAAGACCACTAAAACCAGTGGCATCAAACCTCCTAGTTTCTGAAAAGCTAAAATCCCAGATAGCCTG CAGGAGTTCAATGCAATCATAAGGGAATTTCAAAAGAGAACTTCCACTTGTATACATGTGTGTTTGGTTCCCCATTAGGG AACCTCAGAATCAATTATGATAGAGTAAAATGAATGAAATCACCTTTGGATAACAATATAGACGTTAGGAATCATTTTGG AAGCTAGAGAGAGAAGCTTTTGCATTATCACAACACAACTAGATTTCACAACATTACTCTACAAAATAACTTTTTTCATA AATGTATCCAAACATAAATTACTCCACTTTCAGCTCACTTTTACTATAATCAATCTAACCAAAATCAATTTTATCCAAAA TCAATTGTGACAACGCTGATCCGAACACGCACGTAGTACACATGCGACGCACTTGACACTTTATGCATTGCATATACGTA ACGTAGCTGTACTACAAATGAAGATATACCCATAATAGAAGTATAAAACCTCAAAACTTGTACTGATGTACTCGCCTACA GTGCCAAGTTTATGCTTCAATATTTAGTAAAGTAAGAGGCTTAGGTTGAGGATTGTCAAGGGGCAGAGTAACAGGCTTAT AGCAGGAATAAATGGTAGAAACATTACAACAAATCAAAACTGAACACTGAAGCACAAGATCTCTTTGTGCAGGTAGACCC CAGAAAACCAAAATCTATTACAAAAGAGAAATTTAAACCAGACACCCCCCCCCCCCCACCCCTTTCCCTAAAAACAATTC GTGAGAGATTAATATGAGTTTGAGATGCTTACATCCTAGCTGTCAGGTTTCTCTCTTGAGAGTTTATGAAGTATTTTGTT ATAAACCTATAGTTAACAGTGTCATATAATATTTACCTTGGGCAGGGAATGCCAGATAGCAAGAGAAGCAATCAAGTGAA GTGTTGCTATAGATGATACAATGGCATAAAATCTCAACAAAGTGGACCGGCTTCGTCTTCGACCTTTTTCAGAAAAATTG ACAGAGATAATAGCTTATTTAAAAGGTTGAAATAAAAACCTGAATAAAATTATAAAGGCTAGTAAAGAACTTGGAGCTTA GGAACCTCACCTATTTCAGCAATGATTAGCAAAACAAGACTAAGAATAACAGAAGAAAAGGCAGCTGTATTTGAAGTATG TTGTTGTATTCCTGGTAAAAATGCAAATATCACTCAGATTAGTAGAATGAAAGCCT
CDS sequence (LotjaGi2g1v0458600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAGAGATACACCTTCAGCTAAGCTTTCGCTAATCATTTTCATGTTACTTATCCATAAAATTTCTGGAGCAGACCC TGTTGATACTTATTGTCCAAATGAATTCCCATTTTACACTCCCAACAGTTCATTCCACAAGAACCTTAAGCTTCTCATGG AATCGCTATCCTCCAATACCGCTTCAAAGACAGGTTTCTACAATACATCTGTCGGAGAAGGACGAGACAAAGTGTATGGA CAAGCACTCTGCAGAGGAGACATCACAAACTCCACAATGGTTTGCCAGCAATGCATTCAGAAAGCAAGCCAAGATATCAT GAACAGGTGCAGCAGTGAAGATGCAATGATATGGTATGAGTTTTGCCAAGTTCGGTACTCCTTTCAGATGTTTTTCTCAC GCTCAGTTTATACTGGAAAATATCCACAGCAGAATGATCAGGAGAAGAATGTCTCAGATCCTATTCGATTTGAACAACAC GTGACTTATTTAATGAACAATCTCTCAGATGAAGCTGCTTTTAATCCTGCCAAAAACATGTTTGCAGCTGGGGAAATTAG GTCTCCAGGGAAAAGGACAATAGTTTATGGGCTTGTCCAATGTACCAGGGACATGTCTGGAACAGACTGCAGTAGTTGTT TAAGTTCTGCATTAACAGAACTTACAACATGCTGCTCGAGAAGAGAAGGAGGGATTATTGTCAGTAGAAATTGCAATGTT AGGTTTGATTTGTCCAAGTTCTTCAACACTTCATCAGCATACTTGTTGACTTATCCAACATCCAAAGGAGGAGGGAAATG GAAGCCCTGGATGTTTGTGTTGACTATATGTGGCTCAATTTTAATATTAGCAGTTGTTGTTGGGTTGTGCACTGCTTGCC TCAGGAGAAGAAATGATAGAGACAGAGATGAAGAAAAGAGTGAAAGGATGATATTGCAAGATTTAGTTAGCCCCAGACAT GTAGCAATTACCCAAGAAGGTGAGTTGATTAGTTCTGATGAAATGTTGTTCATGACCTTAGCAACCATTAAAGCAGCTAC TGGTGACTTTTCTGATAGAAATAAGCTGGGACAAGGAGGGTTTGGTGAAGTATACAAGGGTGTTCTGTCAGATGGTAATG AAATTGCAGTAAAAAGATTATCAAGGAAGTCTTGGCAAGGCATGGAGGAATTCAAAAATGAGATCATGCTCATTGCCAAA CTTCAACACAGGAATCTGGTGAGGCTGTTGGGTTGTGTCTTGGAGGGAGACGAAAGAATGCTTGTATATGAGTTCATGTC AAACAAAAGCCTTGATCAATTTATCTTTGATGCAGGAAAACGTCCCAGACTTGATTGGAAAACATGCCAAGGTATTATCA ATGGCATAGCCAGAGGACTAGTTTATCTTCACGAGGAGTCTCGCCTTAAAATCATTCACCGAGACCTAAAGCCAAATAAT GTGTTGCTAGATCATGAACTGGTTGCTAAAATATCAGATTTTGGCATGGCCAGGATATTTTCTGAGAATCAGAATGCAGC TAATACCAAAAGAGTTGTGGGAACATATGGATATATGGCTCCAGAGTATGCAATGGAGGGATTGTTCTCTGTAAAATCTG ATGTCTTCAGCTTTGGTGTTATCTTGCTTGAAATCATTAGTGGGAAAAGAAATAACGGCTTTTACTTAACCGAACTTGCC CCAACACTTCTTGCACATGCGTGGCAGCTGTGGAATGAAGGAAAAGAATCGGAATTTGTGGATCCCTTGTTACGGGAATC ATGTCTTGCTTCTGAACCTGAAGTTCTGAGGTGCGTGCACATTGGACTTCTGTGCGTGCAGCAAGATCCAGAAGACAGAC CCACCATGTCAGATGTGGTGGCTCTCCTGGGAAGTGAATCAACGGTTCTTCCCCAACCAAGCAAACCATCTTTTCCTTTG CGTAGGGTGCATCATGTAGATCCATCAGCATCAACAAATCCTTCAGTGAGTGAGATGATGTGGTCTAGTGTTTTGCCACG ATGA
Protein sequence (LotjaGi2g1v0458600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRDTPSAKLSLIIFMLLIHKISGADPVDTYCPNEFPFYTPNSSFHKNLKLLMESLSSNTASKTGFYNTSVGEGRDKVYG QALCRGDITNSTMVCQQCIQKASQDIMNRCSSEDAMIWYEFCQVRYSFQMFFSRSVYTGKYPQQNDQEKNVSDPIRFEQH VTYLMNNLSDEAAFNPAKNMFAAGEIRSPGKRTIVYGLVQCTRDMSGTDCSSCLSSALTELTTCCSRREGGIIVSRNCNV RFDLSKFFNTSSAYLLTYPTSKGGGKWKPWMFVLTICGSILILAVVVGLCTACLRRRNDRDRDEEKSERMILQDLVSPRH VAITQEGELISSDEMLFMTLATIKAATGDFSDRNKLGQGGFGEVYKGVLSDGNEIAVKRLSRKSWQGMEEFKNEIMLIAK LQHRNLVRLLGCVLEGDERMLVYEFMSNKSLDQFIFDAGKRPRLDWKTCQGIINGIARGLVYLHEESRLKIIHRDLKPNN VLLDHELVAKISDFGMARIFSENQNAANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVILLEIISGKRNNGFYLTELA PTLLAHAWQLWNEGKESEFVDPLLRESCLASEPEVLRCVHIGLLCVQQDPEDRPTMSDVVALLGSESTVLPQPSKPSFPL RRVHHVDPSASTNPSVSEMMWSSVLPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 10 | 19 | 10 | - | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 269 | 245 | - | – | |
| ProSiteProfiles | 26 | 131 | 106 | 15.937 | ||
| Gene3D | 28 | 131 | 104 | 2.2E-21 | ||
| Pfam | 32 | 128 | 97 | 3.7E-19 | ||
| PANTHER | 35 | 636 | 602 | 9.7E-134 | – | |
| PANTHER | 35 | 636 | 602 | 9.7E-134 | – | |
| ProSiteProfiles | 139 | 247 | 109 | 18.969 | ||
| Gene3D | 140 | 247 | 108 | 2.5E-22 | ||
| Pfam | 150 | 243 | 94 | 4.2E-16 | ||
| TMHMM | 270 | 292 | 23 | - | – | |
| Phobius | 270 | 294 | 25 | - | – | |
| Phobius | 295 | 667 | 373 | - | – | |
| Gene3D | 314 | 425 | 112 | 6.5E-37 | – | |
| SUPERFAMILY | 331 | 623 | 293 | 7.69E-85 | ||
| ProSiteProfiles | 350 | 630 | 281 | 40.782 | ||
| SMART | 350 | 630 | 281 | 2.5E-41 | ||
| Pfam | 354 | 622 | 269 | 2.7E-50 | ||
| CDD | 356 | 623 | 268 | 1.37075E-96 | – | |
| ProSitePatterns | 356 | 378 | 23 | - | ||
| Gene3D | 426 | 631 | 206 | 8.1E-60 | – | |
| ProSitePatterns | 471 | 483 | 13 | - | ||
| MobiDBLite | 632 | 667 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0458600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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