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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0078900 |
| Transcript ID | LotjaGi3g1v0078900.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Double-strand break repair protein MRE11; TAIR: AT5G54260.1 DNA repair and meiosis protein (Mre11); Swiss-Prot: sp|Q9XGM2|MRE11_ARATH Double-strand break repair protein MRE11; TrEMBL-Plants: tr|K7LWB6|K7LWB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0078900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8684369..8692455) extracted from Lotus japonicus Gifu genome v1.2.
GCATCCATGGCGGAAGCCGAAGCCACGGACACGCTTCGCATACTGGTAGCCACCGACTGCCACCTCGGGTACATGGAGAA AGACGAGGTGCGCCGCCACGACTCATTCCAAGCATTCGAAGAGATTTGCTCCATCGCGGAGGAGAAGCAGGTCGACTTCA TGCTACTCGGCGGTGACCTCTTCCACGAGAACAAGCCAACTAGGTCAACGTTAGTCAAGGCCATTGAGATTCTCCGTCGC TATTGCCTCAATGATCGACCCGTTCCCTTCCAAGTTGTTAGTGACCAGACCCTTAATTTCCAGAACACGTTAAGTTTCTT TCTCATTCTCCATTTCATTGGTTAAATGGTCTTCAGTTTTGGATTTTTAATTTGAAGTTTTGGTTTTGTGAATGTGAGAT TGTTAAGATTGTGTATTGTTTTTGATTTTACAGGTTTGGTCATGTGAATTATGAAGATCCTCACTTTAATGTTGGCTTGC CGGTTTTTACCATTCATGGAAATCATGACGATCCCGCAGGCGTGGTATGAATCTATATAAACCTGTGGCATTGATATATC TATGAATTTGGACTTTTTTTTCTTCATGTAGTTGTATTGTTTGCTGGTGTTGGTGTTTTGCTTTGAGTTAATCTAAAGCC TGACAGGCTGCTAATCTACTTTTCCATCAGTGGAGTCTTTATTGTTTCAGGATTGTAGAGTTTTGCTACTCGAAAGTGAG GGGCCACTTTAAACGGGTAGAGAGGGGAGTTATAAATATTGGTTTGAACTGGGTAGATTTTAGAAACATCACATGTGCAT GTATTTTATCACATTTTAGAGAGTGGAGTTATGAGCAGTGGAGTCTTTTTCCACTTGCTTTTGTTTTGTTTACTGTGGAA CGTGGATGTAATGTTTGTTAATTGTTGGTGTTGGTGTTTTGCTTTGAGTTAATCTGTAGCCTGTATATCAAGAATCAGAA AAAAAAAAGCGTGACAGGATGCTAATCTACTTTGCTATTAGTGGAGTCTTTATTGTACCAGTATTGTAGAATTTTGCTGT TCTAAAGTGGGGGGTCACTTTAAATGGGTAGAGAGTGGAGTTATAAGTATTGGTTTGAACTGGGGTAGATTTTAGAAACA TTACATTTGCATGTATTTTATAACAATCTCAGCTATTGGTTTTTCAATTGGTGGTCATAATTTTTCCCTTTGCTTTCTAA ATTGCATGACTCATTTAAAAGGAATCAAATCCACGACCGTAATTTGTTGAGGGTTTATGCGAGTCCAATGGCTTTGACTT GGTTTGTTCATTGGCCACTGCTGCATTTAAACATGGACAATCAAGATGAAAGATGATGCAGTAGAAAATATGTTTCAAGT TTAGGATTGGGCTAGTGATGAAGGGGCTTGCGTAGATTGCATGGGGTGATGGGTTCAAATCTCATTGTCACCATTGTATA CGAAAATAATTTTTTTTCAGAAGTTTCTGTGTTTGCCAGAAATTATTGATCCTTTTTAAAGTTGGCATGTTTGAAGACAT GCTTTATGGTAAAATTTGCTTGTTGAAATGCATTTGATTGATTCCGTTACTTAGTCATTATTCAGAACTACAATTGGCTA AAATGAACTATAAATAACTAAGAGTTTGGAAGAAGGACATACATTGTAAACTGAGGACTGGGAGAGATCATCATAGATGT CAAAGGGATGATGATTTTTTTCCCCTTGGGTTTTGGATCCGTGGTAGAGAGGGGTCATGAAAGGGGTTAATGATTTCTAA TGGACTTTGTAGATTACAAGTAGCTTTTGGCTGTTTATAGCACTGTACAGGCAATAGATACTATTTTCTGATTCTAGTCC ACTTCTACGATCTCCACTCACACGTTTTTTAAAAAATCATTTACATTATATGGAAACCGATTTCATGTACATTAATATTT TTTCTACTTAATTATAATTTGTTTACATCTATTCTAAACTGTAACAAAAATGTATTCCTGATTAAATTATTATGACAGGA CAACCTTTCTGTTGTTGATATTCTCTCGGCATGTAATCTTGTCAACTACTTTGGGAAAACAGTTCTTGGGGGTTCTGGTG TTGGTCAGATCACTCTACACCCTATTCTTATCAAGAAGGTTTGTTTTTGGATATTGTTGAACAAATGCAGATATCCTAAT ATGGGAAAAAAAAGGAGAGAAAAGGATGATGATTGTAAATCTCATTTTTTTTCCTGGGCTGTATTGTATGACTTGCAGGG TTCAACAGCTGTAGCTCTGTATGGTCTGGGGAACATTAGAGATGAACGGCTTAATAGGATGTTTCAAGTATGCTACTGAT AAAATTTACTTTGAAACAGTTCATTGATTGGTTAAAGTGTACTTACATATTGGTGTGACATGTTATTTTATTTCTTTTTC AGACACCACATGCTGTGCAGTGGATGCGTCCTGAATCTCAGGAAGGGTGTCAAGTTTCTGATTGGTTCAACATTCTGGTA CTTCATCAGAACAGGTTATCAACATGTTTGGATCCACTTATAATCATCTCAGAATCATTTCTCCGATCACAAAAGCTACT CCTAGTAGCTTCTCTCATAATTACTTCTTCCCCAAACGTGGAAGTCTATTGAGTTTCCAAACACAGACTATGTCTTTATA TGTGTTTTTTTTTTCAGTGATTGCATGAAATATCACATATTGATAAAAATGTGTTCGTACAATCTGAGATTTAAGCATCT TGAAATTATCGGTCAATGATGTACAGTATCTGAGTTTTAGATTTTAATCAACAAGATTGTTGATCTTGTTTTCAACAATG GTTTGCAGAGTGAAAATGAATCCAAAAAATGCAATAAATGAGCACTTCCTGCCACGCTTCCTGGACTTCATTGTGTGGGG ACATGAGCATGAATGTTTGGTTGACCCACAGGTCTACTGTTTAAACTTCTCTTAAAATGGTTCCAGATAGATACATGCTA TGTTCTGCATACTTAATTGGATTCTAATTTTCTTCAGGAAGTTTCTGGGATGGGATTTCACATTTCGCAACCAGGGTCAT CAGTTGCAACATCACTAATTGATGGAGAATCGAAGCCAAAGCATGTACTTCTTTTAGAAATTAAGGTTGTATATATATAA TGAGATCTAAATGCCTCTTTCATTGTAACAAATATTTTGTCATTTCTATATATTCTAAGTGCTTGACGACTTGATCGTTT TTGACAGGGAAATCAATATCGCCCAACTAAGATACCTTTAAAATCTGTGCGGCCTTTTGAGTATACAGAGGTGAGGTCAA GCACTGATATTATTTTGGTTTCCTTTGTTTTATTAATTAAGTACTAAAATTTTCATTTCTCAAGTGCTTGACATTTCAAG CCATCTTATTGTTCATCAATAATCATTGAAATCTTCATAACACAGATTATATTAAAAGATGAGCCTGATATTGATCCCAA TGATCAACATTCTATTCTTGAACATCTGGACAAAGTGGTATGTGGGCTGTTAATATTGGATGAATTTTTTTTCTGCATTT TTCATTTGCCATATATTTTTCTGTGCCCTTTTGGTTTGGTTGCCTAGTTTTTCTGTGGGAGAGGCTCACCTAGTTACTCT ATATTAAAACATGCTTATTCTGTTGTGGTAAAATTTGCTACTCTGCTTTATAATCTGTTTGGAAACCATAGTGGAATTCG TGAGCAGAACTTAACATTTGCAAATTATCTTTGTGGAGGGACCTGTAGTCATATGTGTAGCAACTGTATTTTGATAGTAA AAGATTGTTCAGGTCGGGAAGCTTATAGAAAAATCTAGTAAGCAGGCTGTCCATAGAGCAGAACTCAAGCTTCCACTAAT TCGTATCAAGGTAATTTCTATGTACTATAACACCACTTTTGAATACCACTTCTATATTTGAGGAAGCTTCCTCCCTCCAA TTAAGCTTTTCATTTAGCTGAATGATTAATCTGCAATTCATTTCTTCTATAATCTTACTGGTTTTGATCTTACACTTTTC TTCCTGAAAAGTTCTTACTAGAAAACATAGTATTTTTCGTGATAGTAAATCAATTAAACCCCATTCGTGATACCTGGATT CAGATTCTCAAATCCATCAAAAGAAATAATTTGTTATGAACTTTTATTTGAACTTCCGTTTCAGTGTTTATTCTATTGGC TATAACGGACACCCAGTTCCATATTTTCATTAGACACTGCATAATGGTTTCTGGACGACCTTAACTTTTACAATGTAATT TACAGGTCGACTACTCTGGATTTATGACTATAAATCCTCAAAGATTTGGGCAGAAATATGTAGGGAAGGTAATTTCTATC TATCACTCTTCCTGAATTACTATGCTAATGTTGATTTTACTTGAGGTTTGTTTTGTAGTTTTGATTGGTCATTCTTATAT TAGGTTGCAAACCCCCAAGACATTCTTATATTCTCGAAGTCTGCAAAAAAGGCCAAGAATGAAGGTAATCTTACTTCTTC TACCTTTCTGTACCGGTTCATTTGATATCAACAGCATAGTATTTTGCAGTTACAATATCCTAGTCAGGCGTCTTTCATTA ATTCTCTTGAGGGACCTTCAGAAAATTTTATTTTTTATTTACTTCTTAACCTGCAAAGTATATTTCTTGTTCAGGTTTAT CTAGTTCTTTCTTTTATTTTTTATTTTTGAAAAATTCAGTTTCACCTTGTCCAAGCGCACACCATTGACACTGTTACCTC AAAACATATGACATTGCCCCTTGTGATCTGTTTTAAGAAACAGTTATGATCTGTTTAAAGAAACAGTTACCCCTGAATTT ATTTCAGTAATATCTGTTACAGAATTTTGCACATGGATTGCACATGCTTATTACTAACCTAAATAAAAACTTACAAGATC CAAATCCTTTAATTCCCAAAAGCAACAGAGAGGGCATAAGATCACTTATATAAGATATTTATAATTGCCAGATGCTATTA TACCAATACCCATACACATCTAGACATTAGTTTCATTTGCTTGAGTTACTCCTCCTTTCTGTTGTTTTTGTTGTGATTGG AAATTTAGAATCAACATTAAGGACATGTAAGTCATATGTGATCGTTATTCAAAGTGACTAAAGTCCCAAGTGGCATTTAC TGACTCTCTTTTTTATTTTTTATTTAGTCAAGTTACATAATTTGAAAAACTGTGATAATGCCATTTTTTAACTGAAAACA TGGGAGTAAAGTTAGTTACCCTGGCATTCTTCTTTTGCAGGTAAAATTGATGATTCTGAACGTCTTCGTCCAGAAGAATT AAATCAACAGAACATTGAGGCTTTAGTTGCTGAAAATAATCTGGTACTTCAATCACTGAGTACTTCGCTCTTTTACTCTC TCTACAGATGGCTTTTATGGATATTTTCTGTTAATACAATGAACAGCCGCATATGTTACTGTATACTGTAGTCTGTATAT GATATATTGAATTCACAATCTAATTTTCTTGAATTTGGCTGGATAAGTTTAAAGGATATGATGTCCTCGTTCAACAAAGG ATGCAATGAAAAAAATATAATCATCAGTAGCAAGGATCATCCAATCTCTTTTGCATATTTGTCCATGTGATTTGTAACTC AATAAAAGTTCTGATTTACTACAGTTTAAGTTTGATTTTCCTGTATAATTTTATTGGACAAATTTATTTGTAATTAGAAT TCTGGATTGGCTTTAGATTTCATTGTAGATAAGGAATATAAATATAAAACAAATCTAATTCATGTGATTTTATCTTTCAA GCTATCTTACGCTATCGTTTTGCAGAAAATGGAGATACTTCCTGTCAATGATTTGGATATTGCATTGCACAATTTTGTGA ACAAGGATGATAAAATGGCATTTTACACTTGTGTACAAAACAATATTGTTGAAACAAGAGTAAGTTACCATATTGCATTT ATCTGCTGTATGCTTTTGTCTATGATAATGCTATGTTGGAGCATCTGGTCCATTTAGTACTCTACAGCATACTTAGTTAC TGAGATTAAGTACACTGTCTCTTCTCATATTCTAGTATGCTCTTGTCTTAATGTCATATTCCTTCCTCTTCTCATTGATG ACTTACTTCTGTGTTTGTGCAGAATAAAATTGCTAAGGATTCAGATAACCTGCAGTTTGACAATGAAGATTTAGTCGTTA AAGTTGGAGAGTGCTTGGAGGTTAGAATCTTCATCATTGGTTTTCATTAATTTAGGAATCAAATATTCTCCAATAAATTT GAAGTTAACATACAATTTTCTTGTGGTTAGGCCCAGCTATTATTAGGGCTTTCGTGATATAGCATTATAGTAGCTGCAGA TAATCCAGGCACAACAGTTGCCCTGTTCTCTGGACCTTCATTGATCAAAATTTTGTTTGCATATTTCCACTTTTGTGGTC TTGTCGTCTTGATAAATTTTTACTAGGTGTGGCTGTGTGATCAGTGATCACAATAATTTGATGCATTGAACATACATGTA CATGTCATGAATGACTCTCAGTAGGTTCTCCCTTTTGTTGTAGGAACGGGTCAAGGAACGATCTGTACTCTCCAAGGAAC CCACACAGTTCACCGCTGGTGCTCAGTCATTGGAGGTATTGCAATATTGATTACAAAAGCAGTATTTTGGGCAGGTATTA ATATTATTTATGACCTTCATTCTTAGCTTCTCTTGTGATTCTGATAGGATTTCCGAGCTGCTGGAGCTGGAAGTGCGGTT TCCTTCAGTGATGATGAAGATGCCATGCCAATGTCTAGCTCTAAGCCAAGCACAAGAGGCCGGAGAGGGTCCTCTAGTAC ATCTCAAACTCAAACCAGAGGAAGGGGCCGGGGCAGGGGCAGAGGCAAGGATTCCAGCACCTTGAAGCAGACGACCCTTG ATGGAGCTTTAGGCTTTCGCTCTTCACAGAGGTTGCATTTGCTGAGAAATAATTCATTTCAGTAGCTTTTATGAATTCTA AGATGCAAAGTAAATCAAGAGGGGATATGGATTGATCCCAACTCCTTCAAAACACTTTCTAATTAAAATTTAAAATCATG TTAGAGGGGAATTACATTTCTTATTTTGGTCTCGCTGAATTTGGTGTCTGTCTTCGGTAAAGACTAAAAATATGGTTACG GGATCAGCTATAGCACAGAGATATTGGCTCAACTCAGTATCCTATCTCAGAAAATTTATTTTCTTAAGAGCTATGACTCT GATATCTGACTTCCGAGTTGCATGCATCCCTTTTACTTTGGCCAGTGTGGACAAAGCTAGTTTTAGAGAACATGCATGAT AATAATCTAAAGGATTAGTTTTCCCCATTGTTGGGCTTATATACAGTCCCTTTGGTGCTCTACCGATGTTGTGTTGGCTG TGGATAAATATTCAACATGATTTTATTGATTAAATGCAGATCTGCATCGGTTGCTGCATCAACTGCCATTCGAAGTGTTG CTGATGGTGGGGATAACTTGGCATCTGCTTCAAGTGATGATGCCATTCAAAATGCGGTCGAAGGTGTTGATGACAGTTCG GTATGGACCAAAGGCAATTCTTTGCGTATCGCATTCCTTAGTTAGCAGTACCTTCAATTTGTTTTTTATATATATATTCT TTGGATTGTAAACATCTTTGACATTCTCAGTGATTAAGTTGGATCTGCTGCATCTTACATTGCATAGGAAAATGAATCTA AGCTGCCAGGACGCAAGAGGGCTGCTCCAAAGGGAAGAGGCAGAGGATCTAACCAGCCTTCTAATTCTAAACGTGGAAGG AAATCAGAAAACTCTTCAGTCCATAGAATGCTGATGAACAATGATGATGATGATGACGACGATGATGACAATGTCAGAAA GAGATTAAATAAGTCTCAACCTCGGGTTTGTGTCTCCTTTCATTTCTTCACTTGTTTATTATCATTTAGACTTAATTGCA CTTTTAGTCACCCAGATTAATGATTCTGTGATTTTGGTCCCCTATATTTTTCTCAATTTTAGTCCTCCTATTTTAATAAT TCTACAATTTGATCCCCTACTTCTCTTTTAGCAATTTTGGTCACCTAAATTTAGTGATTCCATGATTTTGGCCCCCCATA TTTTTAA
CDS sequence (LotjaGi3g1v0078900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAAGCCGAAGCCACGGACACGCTTCGCATACTGGTAGCCACCGACTGCCACCTCGGGTACATGGAGAAAGACGA GGTGCGCCGCCACGACTCATTCCAAGCATTCGAAGAGATTTGCTCCATCGCGGAGGAGAAGCAGGTCGACTTCATGCTAC TCGGCGGTGACCTCTTCCACGAGAACAAGCCAACTAGGTCAACGTTAGTCAAGGCCATTGAGATTCTCCGTCGCTATTGC CTCAATGATCGACCCGTTCCCTTCCAAGTTGTTAGTGACCAGACCCTTAATTTCCAGAACACGTTTGGTCATGTGAATTA TGAAGATCCTCACTTTAATGTTGGCTTGCCGGTTTTTACCATTCATGGAAATCATGACGATCCCGCAGGCGTGGACAACC TTTCTGTTGTTGATATTCTCTCGGCATGTAATCTTGTCAACTACTTTGGGAAAACAGTTCTTGGGGGTTCTGGTGTTGGT CAGATCACTCTACACCCTATTCTTATCAAGAAGGGTTCAACAGCTGTAGCTCTGTATGGTCTGGGGAACATTAGAGATGA ACGGCTTAATAGGATGTTTCAAACACCACATGCTGTGCAGTGGATGCGTCCTGAATCTCAGGAAGGGTGTCAAGTTTCTG ATTGGTTCAACATTCTGGTACTTCATCAGAACAGAGTGAAAATGAATCCAAAAAATGCAATAAATGAGCACTTCCTGCCA CGCTTCCTGGACTTCATTGTGTGGGGACATGAGCATGAATGTTTGGTTGACCCACAGGAAGTTTCTGGGATGGGATTTCA CATTTCGCAACCAGGGTCATCAGTTGCAACATCACTAATTGATGGAGAATCGAAGCCAAAGCATGTACTTCTTTTAGAAA TTAAGGGAAATCAATATCGCCCAACTAAGATACCTTTAAAATCTGTGCGGCCTTTTGAGTATACAGAGATTATATTAAAA GATGAGCCTGATATTGATCCCAATGATCAACATTCTATTCTTGAACATCTGGACAAAGTGGTCGGGAAGCTTATAGAAAA ATCTAGTAAGCAGGCTGTCCATAGAGCAGAACTCAAGCTTCCACTAATTCGTATCAAGGTCGACTACTCTGGATTTATGA CTATAAATCCTCAAAGATTTGGGCAGAAATATGTAGGGAAGGTTGCAAACCCCCAAGACATTCTTATATTCTCGAAGTCT GCAAAAAAGGCCAAGAATGAAGGTAAAATTGATGATTCTGAACGTCTTCGTCCAGAAGAATTAAATCAACAGAACATTGA GGCTTTAGTTGCTGAAAATAATCTGAAAATGGAGATACTTCCTGTCAATGATTTGGATATTGCATTGCACAATTTTGTGA ACAAGGATGATAAAATGGCATTTTACACTTGTGTACAAAACAATATTGTTGAAACAAGAAATAAAATTGCTAAGGATTCA GATAACCTGCAGTTTGACAATGAAGATTTAGTCGTTAAAGTTGGAGAGTGCTTGGAGGAACGGGTCAAGGAACGATCTGT ACTCTCCAAGGAACCCACACAGTTCACCGCTGGTGCTCAGTCATTGGAGGATTTCCGAGCTGCTGGAGCTGGAAGTGCGG TTTCCTTCAGTGATGATGAAGATGCCATGCCAATGTCTAGCTCTAAGCCAAGCACAAGAGGCCGGAGAGGGTCCTCTAGT ACATCTCAAACTCAAACCAGAGGAAGGGGCCGGGGCAGGGGCAGAGGCAAGGATTCCAGCACCTTGAAGCAGACGACCCT TGATGGAGCTTTAGGCTTTCGCTCTTCACAGAGATCTGCATCGGTTGCTGCATCAACTGCCATTCGAAGTGTTGCTGATG GTGGGGATAACTTGGCATCTGCTTCAAGTGATGATGAAAATGAATCTAAGCTGCCAGGACGCAAGAGGGCTGCTCCAAAG GGAAGAGGCAGAGGATCTAACCAGCCTTCTAATTCTAAACGTGGAAGGAAATCAGAAAACTCTTCAGTCCATAGAATGCT GATGAACAATGATGATGATGATGACGACGATGATGACAATGTCAGAAAGAGATTAAATAAGTCTCAACCTCGGTGA
Protein sequence (LotjaGi3g1v0078900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEAEATDTLRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEEKQVDFMLLGGDLFHENKPTRSTLVKAIEILRRYC LNDRPVPFQVVSDQTLNFQNTFGHVNYEDPHFNVGLPVFTIHGNHDDPAGVDNLSVVDILSACNLVNYFGKTVLGGSGVG QITLHPILIKKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPESQEGCQVSDWFNILVLHQNRVKMNPKNAINEHFLP RFLDFIVWGHEHECLVDPQEVSGMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLKSVRPFEYTEIILK DEPDIDPNDQHSILEHLDKVVGKLIEKSSKQAVHRAELKLPLIRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKS AKKAKNEGKIDDSERLRPEELNQQNIEALVAENNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQNNIVETRNKIAKDS DNLQFDNEDLVVKVGECLEERVKERSVLSKEPTQFTAGAQSLEDFRAAGAGSAVSFSDDEDAMPMSSSKPSTRGRRGSSS TSQTQTRGRGRGRGRGKDSSTLKQTTLDGALGFRSSQRSASVAASTAIRSVADGGDNLASASSDDENESKLPGRKRAAPK GRGRGSNQPSNSKRGRKSENSSVHRMLMNNDDDDDDDDDNVRKRLNKSQPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 690 | 690 | 1.0E-226 | ||
| Gene3D | 1 | 310 | 310 | 1.8E-137 | ||
| PANTHER | 5 | 673 | 669 | 3.0E-270 | – | |
| TIGRFAM | 8 | 401 | 394 | 6.3E-136 | ||
| SUPERFAMILY | 10 | 345 | 336 | 6.87E-56 | – | |
| Pfam | 10 | 254 | 245 | 1.2E-13 | ||
| CDD | 11 | 279 | 269 | 4.23944E-62 | ||
| SMART | 299 | 452 | 154 | 1.1E-60 | ||
| Pfam | 299 | 452 | 154 | 4.1E-37 | ||
| Gene3D | 312 | 410 | 99 | 4.6E-26 | ||
| MobiDBLite | 533 | 691 | 159 | - | – | |
| MobiDBLite | 541 | 569 | 29 | - | – | |
| MobiDBLite | 579 | 606 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Double-strand break repair | The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix. | ||
| Molecular function | 3'-5' exonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Manganese ion binding | Interacting selectively and non-covalently with manganese (Mn) ions. | ||
| Cellular component | Mre11 complex | Trimeric protein complex that possesses endonuclease activity; involved in meiotic recombination, DNA repair and checkpoint signaling. In Saccharomyces cerevisiae, the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins orthologous to the Saccharomyces cerevisiae proteins. |
Expression pattern of LotjaGi3g1v0078900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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