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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0078900 |
| Transcript ID | LotjaGi3g1v0078900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Double-strand break repair protein MRE11; TAIR: AT5G54260.1 DNA repair and meiosis protein (Mre11); Swiss-Prot: sp|Q9XGM2|MRE11_ARATH Double-strand break repair protein MRE11; TrEMBL-Plants: tr|K7LWB6|K7LWB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0078900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8684444..8692449) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGAAGCCGAAGCCACGGACACGCTTCGCATACTGGTAGCCACCGACTGCCACCTCGGGTACATGGAGAAAGACGA GGTGCGCCGCCACGACTCATTCCAAGCATTCGAAGAGATTTGCTCCATCGCGGAGGAGAAGCAGGTCGACTTCATGCTAC TCGGCGGTGACCTCTTCCACGAGAACAAGCCAACTAGGTCAACGTTAGTCAAGGCCATTGAGATTCTCCGTCGCTATTGC CTCAATGATCGACCCGTTCCCTTCCAAGTTGTTAGTGACCAGACCCTTAATTTCCAGAACACGTTAAGTTTCTTTCTCAT TCTCCATTTCATTGGTTAAATGGTCTTCAGTTTTGGATTTTTAATTTGAAGTTTTGGTTTTGTGAATGTGAGATTGTTAA GATTGTGTATTGTTTTTGATTTTACAGGTTTGGTCATGTGAATTATGAAGATCCTCACTTTAATGTTGGCTTGCCGGTTT TTACCATTCATGGAAATCATGACGATCCCGCAGGCGTGGTATGAATCTATATAAACCTGTGGCATTGATATATCTATGAA TTTGGACTTTTTTTTCTTCATGTAGTTGTATTGTTTGCTGGTGTTGGTGTTTTGCTTTGAGTTAATCTAAAGCCTGACAG GCTGCTAATCTACTTTTCCATCAGTGGAGTCTTTATTGTTTCAGGATTGTAGAGTTTTGCTACTCGAAAGTGAGGGGCCA CTTTAAACGGGTAGAGAGGGGAGTTATAAATATTGGTTTGAACTGGGTAGATTTTAGAAACATCACATGTGCATGTATTT TATCACATTTTAGAGAGTGGAGTTATGAGCAGTGGAGTCTTTTTCCACTTGCTTTTGTTTTGTTTACTGTGGAACGTGGA TGTAATGTTTGTTAATTGTTGGTGTTGGTGTTTTGCTTTGAGTTAATCTGTAGCCTGTATATCAAGAATCAGAAAAAAAA AAGCGTGACAGGATGCTAATCTACTTTGCTATTAGTGGAGTCTTTATTGTACCAGTATTGTAGAATTTTGCTGTTCTAAA GTGGGGGGTCACTTTAAATGGGTAGAGAGTGGAGTTATAAGTATTGGTTTGAACTGGGGTAGATTTTAGAAACATTACAT TTGCATGTATTTTATAACAATCTCAGCTATTGGTTTTTCAATTGGTGGTCATAATTTTTCCCTTTGCTTTCTAAATTGCA TGACTCATTTAAAAGGAATCAAATCCACGACCGTAATTTGTTGAGGGTTTATGCGAGTCCAATGGCTTTGACTTGGTTTG TTCATTGGCCACTGCTGCATTTAAACATGGACAATCAAGATGAAAGATGATGCAGTAGAAAATATGTTTCAAGTTTAGGA TTGGGCTAGTGATGAAGGGGCTTGCGTAGATTGCATGGGGTGATGGGTTCAAATCTCATTGTCACCATTGTATACGAAAA TAATTTTTTTTCAGAAGTTTCTGTGTTTGCCAGAAATTATTGATCCTTTTTAAAGTTGGCATGTTTGAAGACATGCTTTA TGGTAAAATTTGCTTGTTGAAATGCATTTGATTGATTCCGTTACTTAGTCATTATTCAGAACTACAATTGGCTAAAATGA ACTATAAATAACTAAGAGTTTGGAAGAAGGACATACATTGTAAACTGAGGACTGGGAGAGATCATCATAGATGTCAAAGG GATGATGATTTTTTTCCCCTTGGGTTTTGGATCCGTGGTAGAGAGGGGTCATGAAAGGGGTTAATGATTTCTAATGGACT TTGTAGATTACAAGTAGCTTTTGGCTGTTTATAGCACTGTACAGGCAATAGATACTATTTTCTGATTCTAGTCCACTTCT ACGATCTCCACTCACACGTTTTTTAAAAAATCATTTACATTATATGGAAACCGATTTCATGTACATTAATATTTTTTCTA CTTAATTATAATTTGTTTACATCTATTCTAAACTGTAACAAAAATGTATTCCTGATTAAATTATTATGACAGGACAACCT TTCTGTTGTTGATATTCTCTCGGCATGTAATCTTGTCAACTACTTTGGGAAAACAGTTCTTGGGGGTTCTGGTGTTGGTC AGATCACTCTACACCCTATTCTTATCAAGAAGGTTTGTTTTTGGATATTGTTGAACAAATGCAGATATCCTAATATGGGA AAAAAAAGGAGAGAAAAGGATGATGATTGTAAATCTCATTTTTTTTCCTGGGCTGTATTGTATGACTTGCAGGGTTCAAC AGCTGTAGCTCTGTATGGTCTGGGGAACATTAGAGATGAACGGCTTAATAGGATGTTTCAAGTATGCTACTGATAAAATT TACTTTGAAACAGTTCATTGATTGGTTAAAGTGTACTTACATATTGGTGTGACATGTTATTTTATTTCTTTTTCAGACAC CACATGCTGTGCAGTGGATGCGTCCTGAATCTCAGGAAGGGTGTCAAGTTTCTGATTGGTTCAACATTCTGGTACTTCAT CAGAACAGGTTATCAACATGTTTGGATCCACTTATAATCATCTCAGAATCATTTCTCCGATCACAAAAGCTACTCCTAGT AGCTTCTCTCATAATTACTTCTTCCCCAAACGTGGAAGTCTATTGAGTTTCCAAACACAGACTATGTCTTTATATGTGTT TTTTTTTTCAGTGATTGCATGAAATATCACATATTGATAAAAATGTGTTCGTACAATCTGAGATTTAAGCATCTTGAAAT TATCGGTCAATGATGTACAGTATCTGAGTTTTAGATTTTAATCAACAAGATTGTTGATCTTGTTTTCAACAATGGTTTGC AGAGTGAAAATGAATCCAAAAAATGCAATAAATGAGCACTTCCTGCCACGCTTCCTGGACTTCATTGTGTGGGGACATGA GCATGAATGTTTGGTTGACCCACAGGTCTACTGTTTAAACTTCTCTTAAAATGGTTCCAGATAGATACATGCTATGTTCT GCATACTTAATTGGATTCTAATTTTCTTCAGGAAGTTTCTGGGATGGGATTTCACATTTCGCAACCAGGGTCATCAGTTG CAACATCACTAATTGATGGAGAATCGAAGCCAAAGCATGTACTTCTTTTAGAAATTAAGGTTGTATATATATAATGAGAT CTAAATGCCTCTTTCATTGTAACAAATATTTTGTCATTTCTATATATTCTAAGTGCTTGACGACTTGATCGTTTTTGACA GGGAAATCAATATCGCCCAACTAAGATACCTTTAAAATCTGTGCGGCCTTTTGAGTATACAGAGGTGAGGTCAAGCACTG ATATTATTTTGGTTTCCTTTGTTTTATTAATTAAGTACTAAAATTTTCATTTCTCAAGTGCTTGACATTTCAAGCCATCT TATTGTTCATCAATAATCATTGAAATCTTCATAACACAGATTATATTAAAAGATGAGCCTGATATTGATCCCAATGATCA ACATTCTATTCTTGAACATCTGGACAAAGTGGTATGTGGGCTGTTAATATTGGATGAATTTTTTTTCTGCATTTTTCATT TGCCATATATTTTTCTGTGCCCTTTTGGTTTGGTTGCCTAGTTTTTCTGTGGGAGAGGCTCACCTAGTTACTCTATATTA AAACATGCTTATTCTGTTGTGGTAAAATTTGCTACTCTGCTTTATAATCTGTTTGGAAACCATAGTGGAATTCGTGAGCA GAACTTAACATTTGCAAATTATCTTTGTGGAGGGACCTGTAGTCATATGTGTAGCAACTGTATTTTGATAGTAAAAGATT GTTCAGGTCGGGAAGCTTATAGAAAAATCTAGTAAGCAGGCTGTCCATAGAGCAGAACTCAAGCTTCCACTAATTCGTAT CAAGGTAATTTCTATGTACTATAACACCACTTTTGAATACCACTTCTATATTTGAGGAAGCTTCCTCCCTCCAATTAAGC TTTTCATTTAGCTGAATGATTAATCTGCAATTCATTTCTTCTATAATCTTACTGGTTTTGATCTTACACTTTTCTTCCTG AAAAGTTCTTACTAGAAAACATAGTATTTTTCGTGATAGTAAATCAATTAAACCCCATTCGTGATACCTGGATTCAGATT CTCAAATCCATCAAAAGAAATAATTTGTTATGAACTTTTATTTGAACTTCCGTTTCAGTGTTTATTCTATTGGCTATAAC GGACACCCAGTTCCATATTTTCATTAGACACTGCATAATGGTTTCTGGACGACCTTAACTTTTACAATGTAATTTACAGG TCGACTACTCTGGATTTATGACTATAAATCCTCAAAGATTTGGGCAGAAATATGTAGGGAAGGTAATTTCTATCTATCAC TCTTCCTGAATTACTATGCTAATGTTGATTTTACTTGAGGTTTGTTTTGTAGTTTTGATTGGTCATTCTTATATTAGGTT GCAAACCCCCAAGACATTCTTATATTCTCGAAGTCTGCAAAAAAGGCCAAGAATGAAGGTAATCTTACTTCTTCTACCTT TCTGTACCGGTTCATTTGATATCAACAGCATAGTATTTTGCAGTTACAATATCCTAGTCAGGCGTCTTTCATTAATTCTC TTGAGGGACCTTCAGAAAATTTTATTTTTTATTTACTTCTTAACCTGCAAAGTATATTTCTTGTTCAGGTTTATCTAGTT CTTTCTTTTATTTTTTATTTTTGAAAAATTCAGTTTCACCTTGTCCAAGCGCACACCATTGACACTGTTACCTCAAAACA TATGACATTGCCCCTTGTGATCTGTTTTAAGAAACAGTTATGATCTGTTTAAAGAAACAGTTACCCCTGAATTTATTTCA GTAATATCTGTTACAGAATTTTGCACATGGATTGCACATGCTTATTACTAACCTAAATAAAAACTTACAAGATCCAAATC CTTTAATTCCCAAAAGCAACAGAGAGGGCATAAGATCACTTATATAAGATATTTATAATTGCCAGATGCTATTATACCAA TACCCATACACATCTAGACATTAGTTTCATTTGCTTGAGTTACTCCTCCTTTCTGTTGTTTTTGTTGTGATTGGAAATTT AGAATCAACATTAAGGACATGTAAGTCATATGTGATCGTTATTCAAAGTGACTAAAGTCCCAAGTGGCATTTACTGACTC TCTTTTTTATTTTTTATTTAGTCAAGTTACATAATTTGAAAAACTGTGATAATGCCATTTTTTAACTGAAAACATGGGAG TAAAGTTAGTTACCCTGGCATTCTTCTTTTGCAGGTAAAATTGATGATTCTGAACGTCTTCGTCCAGAAGAATTAAATCA ACAGAACATTGAGGCTTTAGTTGCTGAAAATAATCTGGTACTTCAATCACTGAGTACTTCGCTCTTTTACTCTCTCTACA GATGGCTTTTATGGATATTTTCTGTTAATACAATGAACAGCCGCATATGTTACTGTATACTGTAGTCTGTATATGATATA TTGAATTCACAATCTAATTTTCTTGAATTTGGCTGGATAAGTTTAAAGGATATGATGTCCTCGTTCAACAAAGGATGCAA TGAAAAAAATATAATCATCAGTAGCAAGGATCATCCAATCTCTTTTGCATATTTGTCCATGTGATTTGTAACTCAATAAA AGTTCTGATTTACTACAGTTTAAGTTTGATTTTCCTGTATAATTTTATTGGACAAATTTATTTGTAATTAGAATTCTGGA TTGGCTTTAGATTTCATTGTAGATAAGGAATATAAATATAAAACAAATCTAATTCATGTGATTTTATCTTTCAAGCTATC TTACGCTATCGTTTTGCAGAAAATGGAGATACTTCCTGTCAATGATTTGGATATTGCATTGCACAATTTTGTGAACAAGG ATGATAAAATGGCATTTTACACTTGTGTACAAAACAATATTGTTGAAACAAGAGTAAGTTACCATATTGCATTTATCTGC TGTATGCTTTTGTCTATGATAATGCTATGTTGGAGCATCTGGTCCATTTAGTACTCTACAGCATACTTAGTTACTGAGAT TAAGTACACTGTCTCTTCTCATATTCTAGTATGCTCTTGTCTTAATGTCATATTCCTTCCTCTTCTCATTGATGACTTAC TTCTGTGTTTGTGCAGAATAAAATTGCTAAGGATTCAGATAACCTGCAGTTTGACAATGAAGATTTAGTCGTTAAAGTTG GAGAGTGCTTGGAGGTTAGAATCTTCATCATTGGTTTTCATTAATTTAGGAATCAAATATTCTCCAATAAATTTGAAGTT AACATACAATTTTCTTGTGGTTAGGCCCAGCTATTATTAGGGCTTTCGTGATATAGCATTATAGTAGCTGCAGATAATCC AGGCACAACAGTTGCCCTGTTCTCTGGACCTTCATTGATCAAAATTTTGTTTGCATATTTCCACTTTTGTGGTCTTGTCG TCTTGATAAATTTTTACTAGGTGTGGCTGTGTGATCAGTGATCACAATAATTTGATGCATTGAACATACATGTACATGTC ATGAATGACTCTCAGTAGGTTCTCCCTTTTGTTGTAGGAACGGGTCAAGGAACGATCTGTACTCTCCAAGGAACCCACAC AGTTCACCGCTGGTGCTCAGTCATTGGAGGTATTGCAATATTGATTACAAAAGCAGTATTTTGGGCAGGTATTAATATTA TTTATGACCTTCATTCTTAGCTTCTCTTGTGATTCTGATAGGATTTCCGAGCTGCTGGAGCTGGAAGTGCGGTTTCCTTC AGTGATGATGAAGATGCCATGCCAATGTCTAGCTCTAAGCCAAGCACAAGAGGCCGGAGAGGGTCCTCTAGTACATCTCA AACTCAAACCAGAGGAAGGGGCCGGGGCAGGGGCAGAGGCAAGGATTCCAGCACCTTGAAGCAGACGACCCTTGATGGAG CTTTAGGCTTTCGCTCTTCACAGAGGTTGCATTTGCTGAGAAATAATTCATTTCAGTAGCTTTTATGAATTCTAAGATGC AAAGTAAATCAAGAGGGGATATGGATTGATCCCAACTCCTTCAAAACACTTTCTAATTAAAATTTAAAATCATGTTAGAG GGGAATTACATTTCTTATTTTGGTCTCGCTGAATTTGGTGTCTGTCTTCGGTAAAGACTAAAAATATGGTTACGGGATCA GCTATAGCACAGAGATATTGGCTCAACTCAGTATCCTATCTCAGAAAATTTATTTTCTTAAGAGCTATGACTCTGATATC TGACTTCCGAGTTGCATGCATCCCTTTTACTTTGGCCAGTGTGGACAAAGCTAGTTTTAGAGAACATGCATGATAATAAT CTAAAGGATTAGTTTTCCCCATTGTTGGGCTTATATACAGTCCCTTTGGTGCTCTACCGATGTTGTGTTGGCTGTGGATA AATATTCAACATGATTTTATTGATTAAATGCAGATCTGCATCGGTTGCTGCATCAACTGCCATTCGAAGTGTTGCTGATG GTGGGGATAACTTGGCATCTGCTTCAAGTGATGATGCCATTCAAAATGCGGTCGAAGGTGTTGATGACAGTTCGGTATGG ACCAAAGGCAATTCTTTGCGTATCGCATTCCTTAGTTAGCAGTACCTTCAATTTGTTTTTTATATATATATTCTTTGGAT TGTAAACATCTTTGACATTCTCAGTGATTAAGTTGGATCTGCTGCATCTTACATTGCATAGGAAAATGAATCTAAGCTGC CAGGACGCAAGAGGGCTGCTCCAAAGGGAAGAGGCAGAGGATCTAACCAGCCTTCTAATTCTAAACGTGGAAGGAAATCA GAAAACTCTTCAGTCCATAGAATGCTGATGAACAATGATGATGATGATGACGACGATGATGACAATGTCAGAAAGAGATT AAATAAGTCTCAACCTCGGGTTTGTGTCTCCTTTCATTTCTTCACTTGTTTATTATCATTTAGACTTAATTGCACTTTTA GTCACCCAGATTAATGATTCTGTGATTTTGGTCCCCTATATTTTTCTCAATTTTAGTCCTCCTATTTTAATAATTCTACA ATTTGA
CDS sequence (LotjaGi3g1v0078900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAAGCCGAAGCCACGGACACGCTTCGCATACTGGTAGCCACCGACTGCCACCTCGGGTACATGGAGAAAGACGA GGTGCGCCGCCACGACTCATTCCAAGCATTCGAAGAGATTTGCTCCATCGCGGAGGAGAAGCAGGTCGACTTCATGCTAC TCGGCGGTGACCTCTTCCACGAGAACAAGCCAACTAGGTCAACGTTAGTCAAGGCCATTGAGATTCTCCGTCGCTATTGC CTCAATGATCGACCCGTTCCCTTCCAAGTTGTTAGTGACCAGACCCTTAATTTCCAGAACACGTTTGGTCATGTGAATTA TGAAGATCCTCACTTTAATGTTGGCTTGCCGGTTTTTACCATTCATGGAAATCATGACGATCCCGCAGGCGTGGACAACC TTTCTGTTGTTGATATTCTCTCGGCATGTAATCTTGTCAACTACTTTGGGAAAACAGTTCTTGGGGGTTCTGGTGTTGGT CAGATCACTCTACACCCTATTCTTATCAAGAAGGGTTCAACAGCTGTAGCTCTGTATGGTCTGGGGAACATTAGAGATGA ACGGCTTAATAGGATGTTTCAAACACCACATGCTGTGCAGTGGATGCGTCCTGAATCTCAGGAAGGGTGTCAAGTTTCTG ATTGGTTCAACATTCTGGTACTTCATCAGAACAGAGTGAAAATGAATCCAAAAAATGCAATAAATGAGCACTTCCTGCCA CGCTTCCTGGACTTCATTGTGTGGGGACATGAGCATGAATGTTTGGTTGACCCACAGGAAGTTTCTGGGATGGGATTTCA CATTTCGCAACCAGGGTCATCAGTTGCAACATCACTAATTGATGGAGAATCGAAGCCAAAGCATGTACTTCTTTTAGAAA TTAAGGGAAATCAATATCGCCCAACTAAGATACCTTTAAAATCTGTGCGGCCTTTTGAGTATACAGAGATTATATTAAAA GATGAGCCTGATATTGATCCCAATGATCAACATTCTATTCTTGAACATCTGGACAAAGTGGTCGGGAAGCTTATAGAAAA ATCTAGTAAGCAGGCTGTCCATAGAGCAGAACTCAAGCTTCCACTAATTCGTATCAAGGTCGACTACTCTGGATTTATGA CTATAAATCCTCAAAGATTTGGGCAGAAATATGTAGGGAAGGTTGCAAACCCCCAAGACATTCTTATATTCTCGAAGTCT GCAAAAAAGGCCAAGAATGAAGGTAAAATTGATGATTCTGAACGTCTTCGTCCAGAAGAATTAAATCAACAGAACATTGA GGCTTTAGTTGCTGAAAATAATCTGAAAATGGAGATACTTCCTGTCAATGATTTGGATATTGCATTGCACAATTTTGTGA ACAAGGATGATAAAATGGCATTTTACACTTGTGTACAAAACAATATTGTTGAAACAAGAAATAAAATTGCTAAGGATTCA GATAACCTGCAGTTTGACAATGAAGATTTAGTCGTTAAAGTTGGAGAGTGCTTGGAGGAACGGGTCAAGGAACGATCTGT ACTCTCCAAGGAACCCACACAGTTCACCGCTGGTGCTCAGTCATTGGAGGATTTCCGAGCTGCTGGAGCTGGAAGTGCGG TTTCCTTCAGTGATGATGAAGATGCCATGCCAATGTCTAGCTCTAAGCCAAGCACAAGAGGCCGGAGAGGGTCCTCTAGT ACATCTCAAACTCAAACCAGAGGAAGGGGCCGGGGCAGGGGCAGAGGCAAGGATTCCAGCACCTTGAAGCAGACGACCCT TGATGGAGCTTTAGGCTTTCGCTCTTCACAGAGATCTGCATCGGTTGCTGCATCAACTGCCATTCGAAGTGTTGCTGATG GTGGGGATAACTTGGCATCTGCTTCAAGTGATGATGCCATTCAAAATGCGGTCGAAGGTGTTGATGACAGTTCGGAAAAT GAATCTAAGCTGCCAGGACGCAAGAGGGCTGCTCCAAAGGGAAGAGGCAGAGGATCTAACCAGCCTTCTAATTCTAAACG TGGAAGGAAATCAGAAAACTCTTCAGTCCATAGAATGCTGATGAACAATGATGATGATGATGACGACGATGATGACAATG TCAGAAAGAGATTAAATAAGTCTCAACCTCGGGTTTGTTCACCCAGATTAATGATTCTGTGA
Protein sequence (LotjaGi3g1v0078900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEAEATDTLRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEEKQVDFMLLGGDLFHENKPTRSTLVKAIEILRRYC LNDRPVPFQVVSDQTLNFQNTFGHVNYEDPHFNVGLPVFTIHGNHDDPAGVDNLSVVDILSACNLVNYFGKTVLGGSGVG QITLHPILIKKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPESQEGCQVSDWFNILVLHQNRVKMNPKNAINEHFLP RFLDFIVWGHEHECLVDPQEVSGMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLKSVRPFEYTEIILK DEPDIDPNDQHSILEHLDKVVGKLIEKSSKQAVHRAELKLPLIRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKS AKKAKNEGKIDDSERLRPEELNQQNIEALVAENNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQNNIVETRNKIAKDS DNLQFDNEDLVVKVGECLEERVKERSVLSKEPTQFTAGAQSLEDFRAAGAGSAVSFSDDEDAMPMSSSKPSTRGRRGSSS TSQTQTRGRGRGRGRGKDSSTLKQTTLDGALGFRSSQRSASVAASTAIRSVADGGDNLASASSDDAIQNAVEGVDDSSEN ESKLPGRKRAAPKGRGRGSNQPSNSKRGRKSENSSVHRMLMNNDDDDDDDDDNVRKRLNKSQPRVCSPRLMIL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 310 | 310 | 2.0E-137 | ||
| PIRSF | 1 | 703 | 703 | 6.9E-225 | ||
| PANTHER | 5 | 686 | 682 | 1.6E-273 | – | |
| TIGRFAM | 8 | 401 | 394 | 6.8E-136 | ||
| SUPERFAMILY | 10 | 345 | 336 | 7.41E-56 | – | |
| Pfam | 10 | 254 | 245 | 1.3E-13 | ||
| CDD | 11 | 279 | 269 | 5.10016E-62 | ||
| Pfam | 299 | 452 | 154 | 4.3E-37 | ||
| SMART | 299 | 452 | 154 | 1.1E-60 | ||
| Gene3D | 312 | 410 | 99 | 4.8E-26 | ||
| MobiDBLite | 533 | 599 | 67 | - | – | |
| MobiDBLite | 541 | 569 | 29 | - | – | |
| MobiDBLite | 579 | 599 | 21 | - | – | |
| MobiDBLite | 632 | 713 | 82 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Double-strand break repair | The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix. | ||
| Molecular function | 3'-5' exonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Manganese ion binding | Interacting selectively and non-covalently with manganese (Mn) ions. | ||
| Cellular component | Mre11 complex | Trimeric protein complex that possesses endonuclease activity; involved in meiotic recombination, DNA repair and checkpoint signaling. In Saccharomyces cerevisiae, the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins orthologous to the Saccharomyces cerevisiae proteins. |
Expression pattern of LotjaGi3g1v0078900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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