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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0139100 |
| Transcript ID | LotjaGi3g1v0139100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp|Q9ASR1|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr|I1KU21|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0139100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:18294169..18297315) extracted from Lotus japonicus Gifu genome v1.2.
GTGAATTTTTGTTTGATTTTGAATTTTCAGAATCTGATTTGAGATTTGTGTTTGTGTTTACAGGTGAAGTTTACAGCTGA GGAGCTTCGTCGTATTATGGACCTGAAGCATAACATTCGTAATATGTCTGTTATTGCTCATGTTGACCACGGTATGGATT CAAGAGGGTTTTGTTTTGTTTTTCTGGTTATTGCTCTATGATTTACTTTCCTGATTGAGTGTTGTTGTTCTCTTATTCTA TGTTTATGAAGATATAATTGTGTTTTTGGTGTTTGTTTGACAAGAAATTAATGGTTGTATCTCTTGAAATGTTCCTTTAT ATTTGGTATCAAATTAATGTCTTCGATATTTATTTTGGAGTTCTCGCTTAAGGGTTGTTGGGTAGGCGTTTAGACATGCT TGTTTCCTTGAGGGGTTTGTTTTGGGGTTGCTGTTGTGGTTGGTATTTTGCGAGCTATTTTGTTGGCTTGGTCATTGTAC CCATGTTGGGAGGGATAGTTTCTCAACTTTCTATATATTTCAATATATTTTGCTTTCAGAAAAATATTCATTTCAATTAT CTTTTGTATACATATGTCATTAACGATAGTCTGTGATGCAATTGTTTAGCTGTTTATCAGGGGTGCATTTTATTTTGTCA TATGATAATTGCCTTAATTTGCTGGTTTGAATTTTAACAATTTATTCTTTTGGTTCCTTATTGCAGGAAAATCCACTCTC ACTGATTCTCTGGTGGCTGCTGCTGGAATTATTGCACAAGAAGTAGCAGGTGATGTCCGTATGACTGATACCCGTGCAGA TGAAGCTGAGCGTGGTATTACAATTAAGTCTACTGGTATCTCACTGTACTATGAAATGACTGATGTGGCTCTCAAGAGTT TCAAGGGAGAGAGAATGGGCAATGAGTATCTCATTAATCTCATCGACTCCCCTGGGCACGTCGACTTCTCATCTGAGGTT ACTGCTGCACTTCGTATTACTGATGGAGCCCTTGTTGTGGTGGATTGTGTTGAAGGTGTCTGTGTCCAAACTGAAACTGT GCTACGACAGGCCTTGGGAGAAAGGATTAAGCCTGTTCTGACTGTCAATAAGATGGACAGATGCTTCCTTGAATTGCAGG TGGATGGAGAGGAGGCCTATCAGACTTTTAGCCGTGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAAGACCCA CTGCTTGGTGATTGTATGGTCTACCCAGAGAAAGGAACAGTTGCTTTCTCTGCTGGTCTTCATGGCTGGGCTTTTACTTT GACAAACTTTGCAAAAATGTATGCCTCAAAATTTGGTGTTGACGAGTCAAAGATGATGGAAAGGCTCTGGGGTGAGAACT TTTTTGATCCAGCCACCAAGAAATGGACCACCAAGAATACTGGTTCAGCTACCTGCAAGCGAGGGTTCGTTCAGTTCTGT TATGAACCTATCAAGCAGATTATTAACACTTGTATGAATGATCAGAAGGATAAGCTGTGGCCTATGCTGCAAAAGCTAGG AGTCGTCATGAAATCTGATGAGAAGGACCTGATGGGTAAACCATTGATGAAACGTGTCATGCAGACATGGCTCCCAGCAG CTAGTGCTCTCTTGGAAATGATGATCTTTCATCTTCCTTCTCCATCAACAGCCCAGAGATACCGTGTTGAGAATTTGTAT GAGGGTCCCCTTGATGATCAATATGCTACTGCTATCAGAAACTGTGATCCTGAGGGACCTCTGATGCTTTATGTCTCAAA GATGATTCCTGCCTCTGACAAGGGTAGGTTTTTTGCCTTTGGCCGTGTCTTCTCTGGTAAGGTTTCAACTGGTTTGAAAG TCAGGATTATGGGACCAAATTATGTTCCTGGAGAGAAAAAAGACCTGTATACTAAAAGTGTTCAAAGAACTGTCATTTGG ATGGGAAAGAAACAGGAGACTGTTGAGGATGTTCCTTGTGGTAACACAGTTGCTTTGGTTGGTTTGGATCAATTTATCAC CAAGAATGCTACATTGACAAATGAGAAGGAAACTGATGCTCACCCAATTCGTGCTATGAAGTTTTCTGTCTCCCCTGTTG TCCGTGTTGCTGTTCAGTGTAAGGTTGCATCTGATCTTCCTAAGCTTGTTGAAGGTCTTAAACGGTTGGCTAAATCAGAT CCTATGGTTGTTTGTACTATTGAGGAGTCTGGAGAACACATTGTTGCTGGTGCAGGAGAGCTTCATCTTGAGATCTGTTT GAAGGACTTGCAAGATGATTTCATGGGTGGAGCTGAGATTGTTAAATCTGACCCTGTTGTGTCTTTCCGAGAGACAGTTC TAGAGAGATCATGCCGCACTGTGATGAGTAAGTCACCCAACAAGCACAACCGTCTGTACATGGAAGCAAGACCACTGGAG GACGGGCTTGCAGAAGCTATTGATGATGGCAAGATTGGACCAAGGGATGACCCCAAAGTTCGTTCCAAAATCTTGTCCGA AGAATATGGTTGGGACAAGGATCTTGCCAAGAAAATCTGGTGTTTCGGACCTGAGACCCTTGGACCAAACATGGTGGTTG ATATGTGTAAGGGAGTCCAGTATTTGAACGAAATCAAGGATTCTGTCGTTGCCGGATTCCAGTGGGCATCAAAAGAAGGT GCTTTGGCTGAAGAAAACATGAGGGCCATTTGCTTTGAAGTGTGTGATGTTGTCCTGCATGCTGATGCCATCCACAGAGG TGGTGGTCAGATCATTCCTACAGCTAGGAGAGTGTTCTATGCTTCCCAGTTGACTGCCAAACCCAGGCTCCTTGAGCCTG TTTACCTGGTGGAAATCCAGGCTCCTGAGCAAGCCCTTGGTGGTATCTACAGTGTTCTGAATCAGAAACGTGGACACGTC TTTGAGGAAATGCAGAGGCAAGGTACCCCACTTTACAACATCAAAGCATACCTCCCTGTCGTCGAATCCTTCGGATTCTC TGGCACTTTGAGGGCTGCAACATCAGGGCAGGCTTTCCCACAGTGTGTCTTTGATCATTGGGATATGATGTCCTCAGATC CATTGGAGTCTGGCTCACAAGCTGCAACGCTTGTTACTGACATTCGTAAGAGGAAGGGTTTGAAGGAGCAGATGACTCCA CTCTCTGAGTTTGAAGACAAGCTTTAA
CDS sequence (LotjaGi3g1v0139100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCTGAAGCATAACATTCGTAATATGTCTGTTATTGCTCATGTTGACCACGGAAAATCCACTCTCACTGATTCTCT GGTGGCTGCTGCTGGAATTATTGCACAAGAAGTAGCAGGTGATGTCCGTATGACTGATACCCGTGCAGATGAAGCTGAGC GTGGTATTACAATTAAGTCTACTGGTATCTCACTGTACTATGAAATGACTGATGTGGCTCTCAAGAGTTTCAAGGGAGAG AGAATGGGCAATGAGTATCTCATTAATCTCATCGACTCCCCTGGGCACGTCGACTTCTCATCTGAGGTTACTGCTGCACT TCGTATTACTGATGGAGCCCTTGTTGTGGTGGATTGTGTTGAAGGTGTCTGTGTCCAAACTGAAACTGTGCTACGACAGG CCTTGGGAGAAAGGATTAAGCCTGTTCTGACTGTCAATAAGATGGACAGATGCTTCCTTGAATTGCAGGTGGATGGAGAG GAGGCCTATCAGACTTTTAGCCGTGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAAGACCCACTGCTTGGTGA TTGTATGGTCTACCCAGAGAAAGGAACAGTTGCTTTCTCTGCTGGTCTTCATGGCTGGGCTTTTACTTTGACAAACTTTG CAAAAATGTATGCCTCAAAATTTGGTGTTGACGAGTCAAAGATGATGGAAAGGCTCTGGGGTGAGAACTTTTTTGATCCA GCCACCAAGAAATGGACCACCAAGAATACTGGTTCAGCTACCTGCAAGCGAGGGTTCGTTCAGTTCTGTTATGAACCTAT CAAGCAGATTATTAACACTTGTATGAATGATCAGAAGGATAAGCTGTGGCCTATGCTGCAAAAGCTAGGAGTCGTCATGA AATCTGATGAGAAGGACCTGATGGGTAAACCATTGATGAAACGTGTCATGCAGACATGGCTCCCAGCAGCTAGTGCTCTC TTGGAAATGATGATCTTTCATCTTCCTTCTCCATCAACAGCCCAGAGATACCGTGTTGAGAATTTGTATGAGGGTCCCCT TGATGATCAATATGCTACTGCTATCAGAAACTGTGATCCTGAGGGACCTCTGATGCTTTATGTCTCAAAGATGATTCCTG CCTCTGACAAGGGTAGGTTTTTTGCCTTTGGCCGTGTCTTCTCTGGTAAGGTTTCAACTGGTTTGAAAGTCAGGATTATG GGACCAAATTATGTTCCTGGAGAGAAAAAAGACCTGTATACTAAAAGTGTTCAAAGAACTGTCATTTGGATGGGAAAGAA ACAGGAGACTGTTGAGGATGTTCCTTGTGGTAACACAGTTGCTTTGGTTGGTTTGGATCAATTTATCACCAAGAATGCTA CATTGACAAATGAGAAGGAAACTGATGCTCACCCAATTCGTGCTATGAAGTTTTCTGTCTCCCCTGTTGTCCGTGTTGCT GTTCAGTGTAAGGTTGCATCTGATCTTCCTAAGCTTGTTGAAGGTCTTAAACGGTTGGCTAAATCAGATCCTATGGTTGT TTGTACTATTGAGGAGTCTGGAGAACACATTGTTGCTGGTGCAGGAGAGCTTCATCTTGAGATCTGTTTGAAGGACTTGC AAGATGATTTCATGGGTGGAGCTGAGATTGTTAAATCTGACCCTGTTGTGTCTTTCCGAGAGACAGTTCTAGAGAGATCA TGCCGCACTGTGATGAGTAAGTCACCCAACAAGCACAACCGTCTGTACATGGAAGCAAGACCACTGGAGGACGGGCTTGC AGAAGCTATTGATGATGGCAAGATTGGACCAAGGGATGACCCCAAAGTTCGTTCCAAAATCTTGTCCGAAGAATATGGTT GGGACAAGGATCTTGCCAAGAAAATCTGGTGTTTCGGACCTGAGACCCTTGGACCAAACATGGTGGTTGATATGTGTAAG GGAGTCCAGTATTTGAACGAAATCAAGGATTCTGTCGTTGCCGGATTCCAGTGGGCATCAAAAGAAGGTGCTTTGGCTGA AGAAAACATGAGGGCCATTTGCTTTGAAGTGTGTGATGTTGTCCTGCATGCTGATGCCATCCACAGAGGTGGTGGTCAGA TCATTCCTACAGCTAGGAGAGTGTTCTATGCTTCCCAGTTGACTGCCAAACCCAGGCTCCTTGAGCCTGTTTACCTGGTG GAAATCCAGGCTCCTGAGCAAGCCCTTGGTGGTATCTACAGTGTTCTGAATCAGAAACGTGGACACGTCTTTGAGGAAAT GCAGAGGCAAGGTACCCCACTTTACAACATCAAAGCATACCTCCCTGTCGTCGAATCCTTCGGATTCTCTGGCACTTTGA GGGCTGCAACATCAGGGCAGGCTTTCCCACAGTGTGTCTTTGATCATTGGGATATGATGTCCTCAGATCCATTGGAGTCT GGCTCACAAGCTGCAACGCTTGTTACTGACATTCGTAAGAGGAAGGGTTTGAAGGAGCAGATGACTCCACTCTCTGAGTT TGAAGACAAGCTTTAA
Protein sequence (LotjaGi3g1v0139100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDVALKSFKGE RMGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIKPVLTVNKMDRCFLELQVDGE EAYQTFSRVIENANVIMATYEDPLLGDCMVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDP ATKKWTTKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVVMKSDEKDLMGKPLMKRVMQTWLPAASAL LEMMIFHLPSPSTAQRYRVENLYEGPLDDQYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIM GPNYVPGEKKDLYTKSVQRTVIWMGKKQETVEDVPCGNTVALVGLDQFITKNATLTNEKETDAHPIRAMKFSVSPVVRVA VQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIVKSDPVVSFRETVLERS CRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGKIGPRDDPKVRSKILSEEYGWDKDLAKKIWCFGPETLGPNMVVDMCK GVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLV EIQAPEQALGGIYSVLNQKRGHVFEEMQRQGTPLYNIKAYLPVVESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLES GSQAATLVTDIRKRKGLKEQMTPLSEFEDKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 831 | 831 | 0.0 | – | |
| PANTHER | 1 | 831 | 831 | 0.0 | – | |
| Gene3D | 1 | 330 | 330 | 2.3E-187 | – | |
| SUPERFAMILY | 2 | 329 | 328 | 7.64E-105 | ||
| Pfam | 5 | 330 | 326 | 1.9E-64 | ||
| ProSiteProfiles | 5 | 332 | 328 | 54.004 | ||
| CDD | 8 | 218 | 211 | 6.21945E-122 | – | |
| TIGRFAM | 8 | 164 | 157 | 2.8E-17 | ||
| PRINTS | 9 | 22 | 14 | 3.7E-14 | ||
| ProSitePatterns | 46 | 61 | 16 | - | ||
| PRINTS | 53 | 61 | 9 | 3.7E-14 | ||
| Gene3D | 55 | 457 | 403 | 2.3E-187 | – | |
| PRINTS | 89 | 99 | 11 | 3.7E-14 | ||
| PRINTS | 105 | 116 | 12 | 3.7E-14 | ||
| PRINTS | 141 | 150 | 10 | 3.7E-14 | ||
| Gene3D | 210 | 314 | 105 | 2.3E-187 | – | |
| SUPERFAMILY | 330 | 464 | 135 | 5.96E-41 | ||
| CDD | 363 | 458 | 96 | 1.81508E-42 | – | |
| Pfam | 382 | 455 | 74 | 4.8E-10 | ||
| SUPERFAMILY | 472 | 548 | 77 | 6.47E-18 | ||
| Gene3D | 473 | 551 | 79 | 2.9E-32 | – | |
| Pfam | 475 | 537 | 63 | 8.6E-12 | ||
| CDD | 475 | 547 | 73 | 1.39257E-37 | – | |
| CDD | 547 | 719 | 173 | 3.88647E-100 | – | |
| SUPERFAMILY | 550 | 714 | 165 | 3.54E-65 | ||
| Gene3D | 553 | 817 | 265 | 3.6E-123 | – | |
| Gene3D | 559 | 821 | 263 | 3.6E-123 | ||
| SMART | 593 | 710 | 118 | 5.1E-25 | ||
| Pfam | 598 | 710 | 113 | 7.8E-30 | ||
| Pfam | 712 | 799 | 88 | 2.5E-20 | ||
| SMART | 712 | 801 | 90 | 1.6E-19 | ||
| SUPERFAMILY | 715 | 826 | 112 | 2.01E-30 | ||
| CDD | 715 | 793 | 79 | 1.01923E-47 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0139100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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