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LotjaGi3g1v0195600.1

Overview

Field Value
Gene ID LotjaGi3g1v0195600
Transcript ID LotjaGi3g1v0195600.1
Lotus japonicus genome version Gifu v1.2
Description Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT1G45616.1 receptor like protein 6; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|A0A072UGY3|A0A072UGY3_MEDTR Verticillium wilt disease resistance protein; Found in the gene: LotjaGi3g1v0195600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:28514834..28519285) extracted from Lotus japonicus Gifu genome v1.2.

GACATGTTACTACATAATTTGAGGGGCCAACGTGACAGACGTATCAATTAGAGGGACATCAAGCAACGACTTTGAACACG GTTTACTTTGAACGCTACAGCAGTCAGCAGCTATGAGTTAGTTTCTTGACCAATCTCATTTTATTATTCTCTTGCCCCCT CTGCCACTCTACTCTTCAACAAAAACTTTTTACTTTTGGCCAAATTCAAAAGATTTTAGGAAGATAAACACTGGAAAATA CAGAAGGCTCTTGTTGATGGGTCTGCAACTTTGAGAGACCACCATTTGTTCCCTCACTTCTTCTATTTTGTGTTCTTTGG CTGCAACTCAGGGTAGACAACATGAGAATTTCATTATTTTCATTGCTTTCCTTCATTCTCTGCTACTGGATATATCTCAG CATCCACATTTCTGTTGCTTCTGCCAAATGCCTTGAGGACCAACAATTACAGCTCCTCCAATTAAAGAACAGTCTCAAAT TGAATCTTGATAGGTCCAGCAAACTAAAGCTGTGGAATCAAAGCATTGCTTGCTGTGATTGGAGTGGTGTGAGCTGTGAT GATGGTGGACATGTTATTGGCCTTGACCTGAGTGGAGAATCAATCATTGGTGGATTTGACAATTCAAGTATCCTTTTCAG TTTCCAACATCTCCAGAAACTGAACTTGGCTGTTAACAATTTCAATTCTGCCATTCCTTCTGGATTCAACAAGTTGGACA AGTTAACTTATCTGAATATGTCATATGCTGGCTTTGCGGGGCAGATTCCCATAGAGATTTCTCTCCTGACAAGGTTGGTT ACTCTTGGCATCTCTTCTCTTAGCTATTTAACAGGCCAAGAGATGAAACTTGAGAACCCAAATCTACAAAAGCTGGTCCA AAGTCTCACTAGTCTTAGGAAATTGTATCTGGATGGTGTAAGTATAACAGCTGAGGGACAGGATTGGTGCAATGCTTTGC AGCCGTTGCGCGACCTGCAAGAACTGACCATGTCCTACTGCAACCTCTCAGGACCCCTTCATTCCTCCCTGACAAAACTT GAGAATCTATCAGTCATTGTTCTTGATGGGAACAAGTTTTCATCCCCAGTGCCAGAAACATTTGCCAATTTCAAAAATCT GACCACCCTCAGTCTCGCGTCTTGCAAGTTGACTGGAAGGTTTCCTGAGAAGATCTTCCAGATTGGAACATTGTCAGTTA TTGACATATCATCCAACAGCAATCTCCATGGTTTGTTTCCAGACTTCCCAATAAATGGATCTCTGCAGACCTTAAGAGTA AGTAACACAAGCTTCTCTGGAGAATTTCCACCCTCTATTGCTAACATGAGGCACTTATCTGAATTGGATCTATCCTATTG TCAATTTAATGGAACACTTCCCAATACAATGCCAAACCTCACAGAACTCAAGTACCTGGATTTGTCATATAACAGCTTCA CCGGTGCATTGCCATCATTTGCTCTGGCCAAAAAACTTGCCCACCTAGACCTTTCTCATAATGGTTTAAGTGGTGAAATT CCATCATCTTCTCACTTTGAAGGATTGAACGAACTTGTCAGCATTGACTTGCGTTATAATTCTATCAATGGTAGCATTCC TTCAACACTTTTTACACTGCCATCCCTTCGGAAGATTCAGCTTTCCTTCAACCAGTTTAGTAAACTAGATGAATTCAGGA ATGCATCTCCCTCTAAATTAAACACCCTTGATTTAAGTAGCAATGATCTATCAGGGCCTTTTCCAGCATCTATCTTCCAG CTCACTACCGTCTCTATCCTCAAACTTTCCTCCAACAAGTTCAATGGGACAATGCAGCTAAATAAGCTTTTGGAGCTCAG AAATTTAACTGTACTAGACCTTTCACAAAACAACTTATCAGTCAATGTGAACGTTACAAATGTTGAGCTGCCTTCATTTC CCAACATTAGCAATCTCAATTTGGCATCCTGTAATTTGACAACGTTCCCTGGTTTCTTGAGAAACCAATCCAGATTAAAT GTTCTGGACCTTTCAGATAACCAGATTCAAGGAAAAGTGCCCAACTGGATTTGGAAACTGCAAAGTCTTCAAAGCCTTAA TATTTCTCACAATTTGCTGACTGACTTTGAAGGGCCTTTGCAGAATCTTACTTCCAACTTGATAGTCCTTGACCTTCATG ACAATCAACTTCAGGGGACAGTACCTGTTTTTCCTCAATATGCCGTCTATTTGGATTATTCAAGCAACAAATTCAGGTCT GCTATCCCACAAGATATCGGTAATTACCAGTCGTTTACTATTTTTCTTTCTCTTTCAAACAATAGCTTTCATGGAAGCAT CCCAGATTCCCTCTGTAGTGCCTCAAGTGTTCAAGTGCTTGATCTTTCCATTAATAATATTTCTGGAGCAATTCCCTCAT GCTTAATGGCAATGACCGAGAACCTTGGGGTATTAAATCTGAGGATGAACAATCTCACAGGTCCCATCCCAGATACTTTT CCAGCTTCCTGTGCTCTAAGGACTCTGGATCTCCAGAAAAATAAATTAGATGGTCTGATTCCAAAATCTCTTGCTAATTG CTCAGCACTAGAAGTGCTAGACCTTGCAAAAAACATGTTTGATGATGGCTTTCCATGCATGTTGAAGAAGATATCCACAC TCCGAGTCCTGGCCTTGAGCAAAAACAAATTCCATGGTCCCATTGGATGTCCACAGCATAATGACACCTGGAAAAGGCTT CAGATAGTTGATCTAGCCTTCAACAACTTCAGCGGAAAACTACCAGGAAAATGCTTCACAAGGTGGGAGGCAATGATGTC TGGTGAAAACCAAGCTGATTCTAAGGTAAATCACATCCGATTTCAGGTTCTTCAATATGATCAAATATACTATCAGGATT CAGTGACAGTTACAAGCAAAGGTCAGGGGATGGAGCTGGTTAAGATTCTAACTGTCTTCACTTCCATTGATTTCTCATCC AGTCACTTCCAAGGGGAAATACCAAAAGAGCTATTTGACTTTAAAGTACTCTATGTGCTTAATTTATCAAATAATGCTCT TTCTGGCCAAATTCAATCATCTATAGGAAATCTGAAGCAGCTTGAGTCCCTGGACCTGTCAAATAACTCACTGGAAGGAG AAATTCCCACAGAGATTGCAAGGCTATCTTTCCTATCATTCCTGAACCTCACATTTAATCAACTGTCCGGAAAAATCCCT ACAGGCACCCAAATTCAATCATTTTCAGAAGCTTCCTTCATTGGCAATAAAGGATTATGTGGCCCTCCTTTGACTGCAAG CTGCAGTGCTAATCCAAGTCCACCAATGGAGGGGTTGCTTCAATATCCAACATGCAGGAGGCTAACTTGTTCAGTTACTT GGAATTTCATAAGTTTGGAAGTGGGGTTCGTTTTCGGCCTAGGAATTGTCATTGGTCCTTTCTTGTTCTGGAAGAAATGG AGGGTCTGGTATTGGCAACTTGTGGACACAATTCTTTGTTGGATCTTTCCTCAGTTGTCTCTTGAATCTGTAACCCACAG AGGACAAGGGTACAGGGTTTTAAGGTGGCATTAGGAATTTTAAAGTAAAAGTGTATTTAAAATAAAAATGAGTGAAGAAA ATCAGATATAGTTCTGATCTTTTTGTGTATTTATTGTTGTTCCTCTGTTATGATTGTCTTCATTTTAGCTAATGTATGTT TAAAGCCAACATGTCGGACCCGATGTCATAACATCTTGTCTATGACATCTGTCCCTGCGAGATCTGCATTGAGTTGGCTA GGGTTACTGTGAAGCTTTGTTTTGGTTACTTTGTAATCAAGCTAGGGTTGATTGGAAGCTTCTGTGCGCCGTCAAGGGTA ATACTGAATGTGATCAAATCCGGTTTAATGATTTGATCTGAGAAATTGTGGGAGGCTTATTTCTGGAAAAGGAAACTTTT TAATTGAAGACTTTTGTTACAGATTTGTTTCCTGGTAACTCCCTGGCTGTGTGTGGACTCTTTGCTCGCCCAAGCCCATT GAAGACAAGGCTTGGATGACTGCTATATATGAAGACCTAGACCTAGTTGTTTAGCAGAGCTTCTGTTGAGTAAATTAGGG TTTACTCTTGTGTGAGTTCATACTTGTTGTTCTCTCAGCATATTCCTGTGTTGTTATTCTTGTCTGAGAGTTGAGTGTTC ATTGTTTGATCATGAGATATGTGTTTGTATTTGTTACAAGTTGTTGAATCACTGTGGCAGTGATTTAGAGAAAGTGAGAG GGGTTCTCATACTTAGGGTGAGGACTAAGTATTCTTACACGGGTAGAGTTAGGTAGAAAGGGTTTGAACTGTGGCAGTTC TGAGAGACCTTTTGTGTACAATTTCTCTATAATAGTGGAAGAACTTTCTCTGGGTGTGTTTACACCAAATTTTGGTAAAC ACAAATAAAGAATCCAAAGATCAATCTGGGGACTGGATTCGAGTCCTCTTGG 

CDS sequence (LotjaGi3g1v0195600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGAATTTCATTATTTTCATTGCTTTCCTTCATTCTCTGCTACTGGATATATCTCAGCATCCACATTTCTGTTGCTTC TGCCAAATGCCTTGAGGACCAACAATTACAGCTCCTCCAATTAAAGAACAGTCTCAAATTGAATCTTGATAGGTCCAGCA AACTAAAGCTGTGGAATCAAAGCATTGCTTGCTGTGATTGGAGTGGTGTGAGCTGTGATGATGGTGGACATGTTATTGGC CTTGACCTGAGTGGAGAATCAATCATTGGTGGATTTGACAATTCAAGTATCCTTTTCAGTTTCCAACATCTCCAGAAACT GAACTTGGCTGTTAACAATTTCAATTCTGCCATTCCTTCTGGATTCAACAAGTTGGACAAGTTAACTTATCTGAATATGT CATATGCTGGCTTTGCGGGGCAGATTCCCATAGAGATTTCTCTCCTGACAAGGTTGGTTACTCTTGGCATCTCTTCTCTT AGCTATTTAACAGGCCAAGAGATGAAACTTGAGAACCCAAATCTACAAAAGCTGGTCCAAAGTCTCACTAGTCTTAGGAA ATTGTATCTGGATGGTGTAAGTATAACAGCTGAGGGACAGGATTGGTGCAATGCTTTGCAGCCGTTGCGCGACCTGCAAG AACTGACCATGTCCTACTGCAACCTCTCAGGACCCCTTCATTCCTCCCTGACAAAACTTGAGAATCTATCAGTCATTGTT CTTGATGGGAACAAGTTTTCATCCCCAGTGCCAGAAACATTTGCCAATTTCAAAAATCTGACCACCCTCAGTCTCGCGTC TTGCAAGTTGACTGGAAGGTTTCCTGAGAAGATCTTCCAGATTGGAACATTGTCAGTTATTGACATATCATCCAACAGCA ATCTCCATGGTTTGTTTCCAGACTTCCCAATAAATGGATCTCTGCAGACCTTAAGAGTAAGTAACACAAGCTTCTCTGGA GAATTTCCACCCTCTATTGCTAACATGAGGCACTTATCTGAATTGGATCTATCCTATTGTCAATTTAATGGAACACTTCC CAATACAATGCCAAACCTCACAGAACTCAAGTACCTGGATTTGTCATATAACAGCTTCACCGGTGCATTGCCATCATTTG CTCTGGCCAAAAAACTTGCCCACCTAGACCTTTCTCATAATGGTTTAAGTGGTGAAATTCCATCATCTTCTCACTTTGAA GGATTGAACGAACTTGTCAGCATTGACTTGCGTTATAATTCTATCAATGGTAGCATTCCTTCAACACTTTTTACACTGCC ATCCCTTCGGAAGATTCAGCTTTCCTTCAACCAGTTTAGTAAACTAGATGAATTCAGGAATGCATCTCCCTCTAAATTAA ACACCCTTGATTTAAGTAGCAATGATCTATCAGGGCCTTTTCCAGCATCTATCTTCCAGCTCACTACCGTCTCTATCCTC AAACTTTCCTCCAACAAGTTCAATGGGACAATGCAGCTAAATAAGCTTTTGGAGCTCAGAAATTTAACTGTACTAGACCT TTCACAAAACAACTTATCAGTCAATGTGAACGTTACAAATGTTGAGCTGCCTTCATTTCCCAACATTAGCAATCTCAATT TGGCATCCTGTAATTTGACAACGTTCCCTGGTTTCTTGAGAAACCAATCCAGATTAAATGTTCTGGACCTTTCAGATAAC CAGATTCAAGGAAAAGTGCCCAACTGGATTTGGAAACTGCAAAGTCTTCAAAGCCTTAATATTTCTCACAATTTGCTGAC TGACTTTGAAGGGCCTTTGCAGAATCTTACTTCCAACTTGATAGTCCTTGACCTTCATGACAATCAACTTCAGGGGACAG TACCTGTTTTTCCTCAATATGCCGTCTATTTGGATTATTCAAGCAACAAATTCAGGTCTGCTATCCCACAAGATATCGGT AATTACCAGTCGTTTACTATTTTTCTTTCTCTTTCAAACAATAGCTTTCATGGAAGCATCCCAGATTCCCTCTGTAGTGC CTCAAGTGTTCAAGTGCTTGATCTTTCCATTAATAATATTTCTGGAGCAATTCCCTCATGCTTAATGGCAATGACCGAGA ACCTTGGGGTATTAAATCTGAGGATGAACAATCTCACAGGTCCCATCCCAGATACTTTTCCAGCTTCCTGTGCTCTAAGG ACTCTGGATCTCCAGAAAAATAAATTAGATGGTCTGATTCCAAAATCTCTTGCTAATTGCTCAGCACTAGAAGTGCTAGA CCTTGCAAAAAACATGTTTGATGATGGCTTTCCATGCATGTTGAAGAAGATATCCACACTCCGAGTCCTGGCCTTGAGCA AAAACAAATTCCATGGTCCCATTGGATGTCCACAGCATAATGACACCTGGAAAAGGCTTCAGATAGTTGATCTAGCCTTC AACAACTTCAGCGGAAAACTACCAGGAAAATGCTTCACAAGGTGGGAGGCAATGATGTCTGGTGAAAACCAAGCTGATTC TAAGGTAAATCACATCCGATTTCAGGTTCTTCAATATGATCAAATATACTATCAGGATTCAGTGACAGTTACAAGCAAAG GTCAGGGGATGGAGCTGGTTAAGATTCTAACTGTCTTCACTTCCATTGATTTCTCATCCAGTCACTTCCAAGGGGAAATA CCAAAAGAGCTATTTGACTTTAAAGTACTCTATGTGCTTAATTTATCAAATAATGCTCTTTCTGGCCAAATTCAATCATC TATAGGAAATCTGAAGCAGCTTGAGTCCCTGGACCTGTCAAATAACTCACTGGAAGGAGAAATTCCCACAGAGATTGCAA GGCTATCTTTCCTATCATTCCTGAACCTCACATTTAATCAACTGTCCGGAAAAATCCCTACAGGCACCCAAATTCAATCA TTTTCAGAAGCTTCCTTCATTGGCAATAAAGGATTATGTGGCCCTCCTTTGACTGCAAGCTGCAGTGCTAATCCAAGTCC ACCAATGGAGGGGTTGCTTCAATATCCAACATGCAGGAGGCTAACTTGTTCAGTTACTTGGAATTTCATAAGTTTGGAAG TGGGGTTCGTTTTCGGCCTAGGAATTGTCATTGGTCCTTTCTTGTTCTGGAAGAAATGGAGGGTCTGGTATTGGCAACTT GTGGACACAATTCTTTGTTGGATCTTTCCTCAGTTGTCTCTTGAATCTGTAACCCACAGAGGACAAGGGTACAGGGTTTT AAGGTGGCATTAG 

Protein sequence (LotjaGi3g1v0195600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MRISLFSLLSFILCYWIYLSIHISVASAKCLEDQQLQLLQLKNSLKLNLDRSSKLKLWNQSIACCDWSGVSCDDGGHVIG LDLSGESIIGGFDNSSILFSFQHLQKLNLAVNNFNSAIPSGFNKLDKLTYLNMSYAGFAGQIPIEISLLTRLVTLGISSL SYLTGQEMKLENPNLQKLVQSLTSLRKLYLDGVSITAEGQDWCNALQPLRDLQELTMSYCNLSGPLHSSLTKLENLSVIV LDGNKFSSPVPETFANFKNLTTLSLASCKLTGRFPEKIFQIGTLSVIDISSNSNLHGLFPDFPINGSLQTLRVSNTSFSG EFPPSIANMRHLSELDLSYCQFNGTLPNTMPNLTELKYLDLSYNSFTGALPSFALAKKLAHLDLSHNGLSGEIPSSSHFE GLNELVSIDLRYNSINGSIPSTLFTLPSLRKIQLSFNQFSKLDEFRNASPSKLNTLDLSSNDLSGPFPASIFQLTTVSIL KLSSNKFNGTMQLNKLLELRNLTVLDLSQNNLSVNVNVTNVELPSFPNISNLNLASCNLTTFPGFLRNQSRLNVLDLSDN QIQGKVPNWIWKLQSLQSLNISHNLLTDFEGPLQNLTSNLIVLDLHDNQLQGTVPVFPQYAVYLDYSSNKFRSAIPQDIG NYQSFTIFLSLSNNSFHGSIPDSLCSASSVQVLDLSINNISGAIPSCLMAMTENLGVLNLRMNNLTGPIPDTFPASCALR TLDLQKNKLDGLIPKSLANCSALEVLDLAKNMFDDGFPCMLKKISTLRVLALSKNKFHGPIGCPQHNDTWKRLQIVDLAF NNFSGKLPGKCFTRWEAMMSGENQADSKVNHIRFQVLQYDQIYYQDSVTVTSKGQGMELVKILTVFTSIDFSSSHFQGEI PKELFDFKVLYVLNLSNNALSGQIQSSIGNLKQLESLDLSNNSLEGEIPTEIARLSFLSFLNLTFNQLSGKIPTGTQIQS FSEASFIGNKGLCGPPLTASCSANPSPPMEGLLQYPTCRRLTCSVTWNFISLEVGFVFGLGIVIGPFLFWKKWRVWYWQL VDTILCWIFPQLSLESVTHRGQGYRVLRWH 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 28 28 -
Phobius 1 4 4 -
SignalP_EUK 1 28 28 -
TMHMM 5 27 23 -
Phobius 5 16 12 -
PANTHER 12 283 272 0.0
PANTHER 12 283 272 0.0
Phobius 17 28 12 -
Gene3D 25 201 177 1.7E-30
Phobius 29 1006 978 -
Pfam 32 73 42 1.4E-8
SUPERFAMILY 56 196 141 1.21E-14
SMART 101 124 24 170.0
ProSiteProfiles 103 125 23 5.109
SUPERFAMILY 177 513 337 4.87E-56
Gene3D 202 303 102 5.1E-21
SMART 233 256 24 49.0
ProSiteProfiles 235 256 22 4.593
PANTHER 286 373 88 0.0
PANTHER 286 373 88 0.0
Gene3D 304 400 97 2.2E-28
SMART 353 377 25 21.0
ProSiteProfiles 355 377 23 5.856
SMART 376 404 29 18.0
ProSiteProfiles 378 400 23 7.08
Pfam 378 398 21 1.1
PRINTS 379 392 14 1.0E-5
Gene3D 401 517 117 1.3E-21
ProSiteProfiles 404 427 24 5.171
PANTHER 424 1046 623 0.0
PANTHER 424 1046 623 0.0
SMART 426 447 22 19.0
ProSiteProfiles 428 449 22 6.295
Pfam 450 465 16 0.87
ProSiteProfiles 452 474 23 5.733
SUPERFAMILY 498 691 194 2.49E-32
SMART 499 520 22 45.0
SMART 499 532 34 160.0
ProSiteProfiles 501 522 22 6.603
Gene3D 518 622 105 1.0E-20
Pfam 527 586 60 6.4E-9
ProSiteProfiles 528 549 22 5.279
ProSiteProfiles 551 573 23 6.072
SMART 573 595 23 360.0
SMART 573 599 27 150.0
ProSiteProfiles 575 597 23 7.727
ProSiteProfiles 599 620 22 5.633
SUPERFAMILY 649 978 330 8.16E-55
ProSiteProfiles 669 690 22 4.809
Pfam 694 752 59 2.3E-7
ProSiteProfiles 694 716 23 5.063
ProSiteProfiles 718 739 22 5.841
ProSiteProfiles 889 911 23 5.155
Pfam 890 948 59 1.9E-7
SMART 911 935 25 12.0
SMART 911 937 27 170.0
PRINTS 911 924 14 1.0E-5
ProSiteProfiles 913 935 23 6.695
ProSiteProfiles 937 959 23 4.932
TMHMM 1007 1029 23 -
Phobius 1007 1030 24 -
Phobius 1031 1070 40 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0195600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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