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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0270600 |
| Transcript ID | LotjaGi3g1v0270600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CCR4-NOT transcription complex subunit 4; TAIR: AT5G60170.2 RNA binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O95628|CNOT4_HUMAN CCR4-NOT transcription complex subunit 4; TrEMBL-Plants: tr|A0A0R0FWC0|A0A0R0FWC0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0270600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:52219928..52228064) extracted from Lotus japonicus Gifu genome v1.2.
GAGCAGCCAAAAAGGCCCATCCAAACAAAGCCCTCTCTCTTTTAAAATAAAAACACACCTTGTGGTTTTCTCTGCCTCTT ACCCTGTTGCTCGCTCTCATTCTGCGTCGTCTCCGTTATCGTGCGCTGCGCTTCTCGAACAATCTCCACCTCACAGTTCC CACTTCTTCTTCTTCCCGATCTTTCCACCACTGTAAGTCTCTCATCACTTCCAATTCCATAACCCTAATTCCTCTCTCCT CCGAATCCAATTTCAATTCTAGATCCCTAATGGATTCCGCGATTCTATTATTCTGCTATTGATTTCGCCAATCATTCTCA TGCTTAACAATTTTTTCGGTTTATTGTTGTTTTGTAATTTTGAATTCTCAATCCAGCGTCGTCGTCGTCGTCTTTCGGAT TTTTGTCTGTTTCGCCTCTGTTAGTTTTCAACTATTGTGATTAGATTAGGTTTTCGATTGCCATTTGCCAATGATTCCCT TATTGTTGAATTTCCATTTCCATATCATCTAATGCATGGTCTTTTTTTTTTGCTGATTTTGTGTTACAGTATACTAAGTC ACTGTGGATCAGTGTAAAGCACTTTATCAGTTTTTTGTATTAAGAGTAGATGGTAATTTGAACTGTCATCGTGATTGTTG GGTTCCTAGGGCAAAATTGCACTGTCAGTTCACTGAATATAGGGTTTTTGAATCTTGATTTCTATCCAAAAATTTTACTT TTTTTGATTCAGGCTTAAGTTTTGTGATGACATTGATTATAATATCCCCTTGTTACAGTGTTTTCTTGACGAGGACTTAT GTTTGTTGGTTTGTTGAATTTTCAGCCAGTGCAATCATGAGTGACGAAGGAGAAAGGTCATGCCCTCTCTGTGCTGAAGA GATGGATTTGACTGATCAGCAGTTGAAACCATGCAAATGTGGCTATGAGGTTTGACGCTATATCTATTTTGTTATTAGGC AATCATCTGAAGGTTTTTATATAATCTGTTGAACAAGTCTTTGTTGTGGGATTTTTAAGGTTATTTAGTATCTTTATCAA TTTGTTATATGGTTTTTTGGTCTATGTATTTTTCTCTCTGTTGATGTTTTAACATTTGGCATTCCTCTCTCTGCCCTGCT CTATTCTTGATCCTATTAGGTGTGTCTTGTTACTCTGCAAGGTGACACTAATTATTAAAATGAGTATACAATGTGTTATT GATGATATCTTGTTGACGGAATACTATGGTTACACTCCAAACTATATAGTACAAGTGACTTTTTTTACTGGTTAGAATGA AGTGTTGATTCCATATTTTTTTTATACAATTCAACATGTATATAACATACTTGTTCCTTTGTTTCCTGAGGACATGGTTT TATTAATCACAAGCACTAATACTAATAAACACCAATTTCATCCCTACTTGACTGTAGATATGTGTCTGGTGTTGGCATCA CATAATGGACATGGCTGAAAAGGATGACACAGAGGGACGATGCCCTGCATGTCGTTCTCCATATGATAAGGAAAAGATTG TCGGGATGGCTTCAAACTGTGACAGGTTATTCTATTAACAGTACTTTCTTTGTAGTGTTGAAATGTTATATTGTTTTCCC AGAACCTTTCTTCTATAATTATACTAGCATGCATTTGTATAACTATATCTTAAAACAACTCGTTAAATAAGATATTATAT ATATATAGAACTCTTAAGTTGTATTTTATCTTAATGTTTGAGATCAGATAAAGGAAAATACCAATTATTGAACTTTTTGT TTCTTAGATCTTATTAGTTAGAAGCTTTATTATGCTTCTAAACTATGTCTTTTCTGTGTGTTCCTCTTGTTAATGATATC TTCCTTTAGATTGTTGGCTGGGGTCCATATGGAAAGAAAAACGAAGAGCCAGAAAGCAAAATCTAAATCATCTGAAGGAC GGAAGCAGCTCAGTAATGTGCGAGTGATTCAGCGGAATCTTGTTTACATAATGGGATTGCCCCTCAATCTGGCAGATGAA GATGTAATTTTTTTACCTCATCTGCTTTTGACATTCGCGTTAGCCATCTTGTGTATCTTCCTTTCTTTATCAAACAAATA TTGTCATTTTTTTAATTCTTGGGCTAAATTTTCATTACAATTCATGCAGCTTCTCCAGCGGCGGGAGTATTTTGGCCAGT ATGGGAAGGTCTTAAAAGTGTCAATGTCCCGGACAGCAGCTGGTGTTGTTCAGCAGTTTCCGAACAATACTTGTAGTGTG TAAGTTCATGTGCTGTTCATTTGCGGATTAGCTTCTTTTCAGTAGTGGTATTGGGCATAATTGTCCTAGTCCAACTATAG TGGCATATAGCGGCTACTCTATTGGCCACTTCTGAATGATTTAAGCGGTGCAAAAGCAATTCATCGTTGCAGCTTATAGC AGCTACTCTATTGGGAGTTGATTTTGGGTCTTGACCTCTCTAAAACCCAACACAATCCAATTGGCTTTAAAAGTTTAGGG GCTTAGGTCCATTGACCCTATAAGTCAAAATGTTATTTAGGGATCAGAAATCACATTACTAGGGCATCACATGCACCATC TGTTTGTATACTTGTCCTCCTTTTGTTCTCTTCAATTTATGTTCTTGTTCCTTTTTAATATTTTTATGCTAGATTATAAA TTATGTGGTTTTTGCTAATATTTGAAGTATTTCATTATGATGGCTTTCCTTGTTATAGTGACCACTGGCACTATACCACC ACTTTGTGCTTTTTGCCAATGAAAACATTGATATTCTGATTTTTTGGTAGTTAGCCTGTCATATTACTTTATATGATACA TAGACCATTTACTGTGTCTGATTTGTTGTCATTGAAAAGAATTAGATTGTGTACAGGTCTATGTAGTTTTTTTTTCTTTT TGAATATTTCCCTCGTTCAACATTTGGTGAAAGAAATTTAGAAAATTGGCCAGTAAAAAGACTTGAAAAACAATTCTTTC CTTGGTAAAGGAAATAGAAAAGGTTATTTATGTATTAAGCGGTAACCATGTGCTTTTATTTATAAAAATTGAAAGCAGGA TTTATGCCTCCACCCTCTCCAATGGAGAGTCTCCATGATGTTCCCTGCTCTGTCAGCCTGTTTGGTCACCCTTTTTTTTT CATAATATGTTAAGTGTTGCAGCTCTTTAAGGAAGGTTTTCTGGGTTTCAGATATATTACTTATTCAAAGGAAGAAGAAG CAATTCGATGCATTCAAAATGTACATGGATTTGTTTTGGAGGGTAGACCTTTAAGGTATCACTATTTGCACATTTTGAAT CTTTTCATGTATGGGATGATTGACCTCTTATTCTTGCTAACCATTTTTGTATGGTTTTGGTTATGCACATTTGCAGGGCT TGTTATGGAACCACTAAATATTGTCATGCATGGCTCAGAAACATGGTTTGAAAATATCAAAATCCTGTATAGATTTTTAA CATGTTACATAAATAATTAAGCTTTTAATTGAGGATAGATCTTTATGACCAGCCTTGCAGCAATTCGGATTGTCTATATC TGCATGAGATTGGCTCTCAAGAAGATAGTTTCATAAAAGATGATATAGTTTCTGAATGCACTAGGTACTTCTCTTACCTT AAATGACTTTTAATATGGGACTTATTAAGCCACTTGCTTTTCTTATAATGGTTTACTCACTTGATTTATTGTTTTGAAGA AGCCGTCTTCAACAAATTACCGGTGCTGCATACAATTTGCAACGGCGGTCAGGGAATGTACTGCCTCCTCCAATGGATGA TTGTGCAAATAATTCTTCAGGAAACCCCATTGTGAAAAACGCTTCAAATGTAGGACATTTTTCATGCCCTTCAACTCTTG CGTTGTTGCGATATTTAGTGGTTTTTCCCAGATTGATTGTACTGCTGGAAAATTTAGTTTGTGCACTCTGCACCTGAATA TGTAGGTACTAACGTTTTATTTTGGTCGTGGAGCAGAATTCAGTTAGCATTGTAAGAGGTTCGCCTCCTAATGGAAGTTC TGGGAGGCCTATGGCTCTTCCTGCTGCTGCATGGTAATGTCTAATTTTGTATTTTGCTTTGAGTGTTCCAAGCATTTTAA AGATAATGAACATTTCAATCTTGTTCATTAGGGGTACACGGGCTACAAATTGTAAGCCAGCTGCTGGAGGTGTGTTATGT CCAAATGGAGTGTCCAATCCCAAACCTGATCCAATCAGCAGTACCCTACCCTTTTCCTCAGCTGTTGTAGGCACAAATCA GGCTTCAATACAAAGTGGTGCGGCAAAGAGACCACCGTCAAGTGATGGGAGTCATAGTATTACACCTGGAGTCAATAATA ATAGCATAGATGTCCTTGGCAGTGCTTGTGAAAAAAAATTGCCTTCTGATGTTTCTTCAACACCTGTGAATTTGAACAGC CAGTTGTCTTCTCTACCATTAGCTAAAGATTCTGATAGAGGGAGATGTTCTACATCAGAGACAACAAATTCTATTGGCAG CTTTGGTCATGAGGAAGCAATTACTTCTACCAATGAAGAGATTCAGAATTTGTCCTATGAGTTGTCCTCTGGAAACACTG ATAGAAATGCCCTAAATGAACACCACAACCTATCCAAACCTAGCAGCCCACCTCCTGATAATGTCCTGGTTAATTCTATG CAATCTCACAGATCACAGTATAATGCTGACAAATTTAGTGATCCGGTAATAACAAATACTGACAGTAAAGGTGCTATATC AGATAATGAGGTTCGTACATTGAAGGAAGAATATAATTTGAGATTGGATTCTCAATCTCAAGTAGTATCAGATAATGCTG AAGTGGAAGATGATGTGACGTCTTTTGATAATCAGAGACTTAAGGATCCAGAAGTTTTGTGTCGTTCTTATTTGCCAAAG TCGAGTTCCCTTAGTGTCTCCAACCATTCAAGTCCTCATATTCTGCAGCATGGGGAACCTTGTACTGTTATAAATGCTGG TTCTTTAGCTGCAGATAATAAAAATGGGGATGACTCACTATTACATGGGTCTAATGTATTAGGCAATGGACATCCTGAGA AATTGGTCAGCACCAACTCTTATGGGTTGCTTCATGAGGAAAGGAACGAGCAATGCATTGGAAGATTAGTTAGTGAAGCA GTTAATTGTGGAAGTGATGCTGCTGTGGATAAGGGCGAGAGTAGTATAATTTCAAATATATTGTCCATGGATTTTGATAC CTGTGATGACTCACTAATATCATCTGAGAGGTTGGCCAAGCTGTTGGGTGACAACATCAACAACCAGAATGGCCCGCTAA AGAAATCTAGTTCTTGGAAAGTTCAAAGTAATCAATCAAGATTCTCTTTTGCAAGACAGGAGGAATCCAAAATCCAAGCC TTTGATGTACATCCATCTTATGGTGCCAACCAACAATTTCCAAAGAGCCCCTCACTCTTCCAGGGTTTTATGGAAAGAGA CTTGTCTTTGGATAGGCTGGGTATTGCAAATGGCTTTCATGCCAATAACCTTGAGGAATCTGGAAATCTAGGCAATGGTC TTTTTGTTGCTTCTTCTAATAAGCCTTCCTGTGAGTATTTATAGCTTAATTAGACTGATTACTGTAGTTTTTATATTAGC ATTTCCTATCATTGGTTCTGGATAGAACAGCTTACTGGCCAGATTTATTCTGTTTATTTCAATGTGGTGATAACATTCCT TTTTCAACTATGTGGTCAATTATATATCGGCACTGATTTTGACCAAGAGTTTTGTCACCGAGTTGAAAGTGAAATTGCTG CTCCTAAATTTGCCTTATCTTTGTAAAGACATCTAATGATCTTCCTATATTATGGTTTTCAGCTGTTTCAAGAGCGCAGT TTTCAGCACCGCCAGGATTTTCAGTTCCAAGCAGGCCACCACCTCCTGGTTTCTCCTCTTATGAGAGAATGGGGCAGGCT TTTGACTCTACTTCTGGTTAGTTGTTTCTTGAACATGTCCATTATTTCTGCAAATTGGTTGAGTATAATAGTTATCCTTG TGACAGGTAATTCATTGCTTGACACATCTTTTTCACTGAGAAATTCATATCAGACACCCTCAACTGGAAATGTTGGTGGC GCAGGAGACATTGAATTTATGGATCCTGCTATTTTGGCAGTTGGTAAAGGGAGACTTCAAGGTACACTAAACAGCCCATC ACTGGACGTTCCATCCAATTATTCCTCACAGTTGAACTACTTTGAAAATGAGGCCAGACTTCAATTATTGATGCAAAGAT CTCTCTCACCACAGCAAAACCTTCGCGGGAATTCTTTTTCTCCGCTTGGTAATTCTTATGGCATTTCTTCACAGTTAGAT CAAACACAAGCCAGTAATCTGGCATCATATCCTCAGTTGTCCCTGCAGCAATCTCATGATGCAGTCTTTCCAAATGGCCA ATGGAATGGGTGGAATGAAATGCAGAGCAGTAATAATCTTAGTGTAGCTGAGCTTCTGAGAAATGAGAGACTTGGATTTA GCAAATTTTATAGAGGATTTGATGATTCAAAATATCAGATGCCAAATTCTGGAGATCTGTACAACAGGACATTTGGGATT TGAACTTATTGGCTGTATTTATAGACTATATTTCACAATGTTGACCAAGGTAAAGCCAAGCCTGAAATGGACAAACACAA ATTTTCCCGTGTTGTCAAAGGTGATGGGTCCAGTGCATTACATGATGAGTCTTTTGGGCTACTACCCGATGATGAAACTC TTAAAAAGTGCAGTTTTTATCTGCAGCTGGTAATTATTCAAGCTTCATCTTTTCTTGCTTTCATTTTTATGCTTTAGTTG GCTTCTGATGGGACTTCAACTACTTGTCGGTCAACACTAAATTTAAAATATGTCAAGTATGAGAACTTCTAAGTGTAAGC ACTAAATTCTGTCGCCTTTTTCTGTGTAGTTCGAGATTTGCGGAGGTGAGCTGGGTTGAGATTCAAGAAATCAATTGCAG ATTGAAATATGATCTCATTGGCAGGTAGATATTGGTTGGTTTTCTCCCAGAAATACAGATCATGGATTTTGTAAATCCGT TGACGATCAAATAATCTATTTGGTTTGATGGGTAATGAAATGAAAATAATTTTGGCATTAATTTTCATCTTGGTAGTGTT TGATAATCATATTTGGTGCGAAATTTGTGACCTTCAAACCGGGAAATTCCTTCCGTGTAACGATGTTGCTACCTTAGTTG ATCTAGTGACTTTTTTACAGAGACTTTTTCTGATATTCAGTCTTCTGTGCATATAAATTTTTTAATGATAGTTAATCCCT TCAAATACACAGGTGGATGAGTTTCAAGTCTTGAGCTATATTTGTGGTTCCTGCCAATTGTCTTGCTTTGTTTTGTTACT CCTTATTGCATTTTGCTTTCTTGTGATTATTTAACTGGTTATCAGGCTAAATAACAGCAAGGCCGGAGTAACTGGTGACA CTTGATGAATGACTATTAGCATGGCTGTGTTAATAATATTATGCATCTGCAAATCCTAGATGTATTTTAACTTGATGTTG ACTGCAGCGATAGTTATATTTTGCCGATTGTTGATTTGGGCCGGTTAATGTTATGGGTTATTAACCTGTAGGAAGGTTTG TCATTTTTTTGTAGATTACAATACAAAATAGAAGCTATTCATTCAATGTGTTGTGGTGTTAAGTCTCACATTGTTTAGAC ATGAAGAATAAATACTCAGAATGAATAATCATTTCTTCAAACCTCATTTTTTAGGTGTGAAGAGGTGGAGGAAGTGAGAG ATAGGAAGAAAGGAGAGAGAAAGTAAAGATGTGATAAGTGATTTGATTGATAGAGAAGAGAGAAATAGATAGAAAATGAA GGTGGAAAAGGAGTGAAGGTGTGTATGAAGATATAACTCTGAAGAACTTATAAATGAAAGAACAAAAAAATAGATCAAAG TCTAATTTGATGATATGTGCATTCCGATGTGTATATGTACATTTTGATGATTAGCTCCACCCTCAAGATATCAATTTATT GGGCGGGAATGTTGTTTACATTGTCTAGAGGTATACCACTAGGAAAATGGAGTTACATCTCATTTAAGTTAGTTTTTGTG TAGGAGTTAGATACAACACAAATTCTAATACTTTGACGGTGTCGGATTACATTATGG
CDS sequence (LotjaGi3g1v0270600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGACGAAGGAGAAAGGTCATGCCCTCTCTGTGCTGAAGAGATGGATTTGACTGATCAGCAGTTGAAACCATGCAA ATGTGGCTATGAGATATGTGTCTGGTGTTGGCATCACATAATGGACATGGCTGAAAAGGATGACACAGAGGGACGATGCC CTGCATGTCGTTCTCCATATGATAAGGAAAAGATTGTCGGGATGGCTTCAAACTGTGACAGATTGTTGGCTGGGGTCCAT ATGGAAAGAAAAACGAAGAGCCAGAAAGCAAAATCTAAATCATCTGAAGGACGGAAGCAGCTCAGTAATGTGCGAGTGAT TCAGCGGAATCTTGTTTACATAATGGGATTGCCCCTCAATCTGGCAGATGAAGATCTTCTCCAGCGGCGGGAGTATTTTG GCCAGTATGGGAAGGTCTTAAAAGTGTCAATGTCCCGGACAGCAGCTGGTGTTGTTCAGCAGTTTCCGAACAATACTTGT AGTGTATATATTACTTATTCAAAGGAAGAAGAAGCAATTCGATGCATTCAAAATGTACATGGATTTGTTTTGGAGGGTAG ACCTTTAAGGGCTTGTTATGGAACCACTAAATATTGTCATGCATGGCTCAGAAACATGCCTTGCAGCAATTCGGATTGTC TATATCTGCATGAGATTGGCTCTCAAGAAGATAGTTTCATAAAAGATGATATAGTTTCTGAATGCACTAGAAGCCGTCTT CAACAAATTACCGGTGCTGCATACAATTTGCAACGGCGGTCAGGGAATGTACTGCCTCCTCCAATGGATGATTGTGCAAA TAATTCTTCAGGAAACCCCATTGTGAAAAACGCTTCAAATAATTCAGTTAGCATTGTAAGAGGTTCGCCTCCTAATGGAA GTTCTGGGAGGCCTATGGCTCTTCCTGCTGCTGCATGGGGTACACGGGCTACAAATTGTAAGCCAGCTGCTGGAGGTGTG TTATGTCCAAATGGAGTGTCCAATCCCAAACCTGATCCAATCAGCAGTACCCTACCCTTTTCCTCAGCTGTTGTAGGCAC AAATCAGGCTTCAATACAAAGTGGTGCGGCAAAGAGACCACCGTCAAGTGATGGGAGTCATAGTATTACACCTGGAGTCA ATAATAATAGCATAGATGTCCTTGGCAGTGCTTGTGAAAAAAAATTGCCTTCTGATGTTTCTTCAACACCTGTGAATTTG AACAGCCAGTTGTCTTCTCTACCATTAGCTAAAGATTCTGATAGAGGGAGATGTTCTACATCAGAGACAACAAATTCTAT TGGCAGCTTTGGTCATGAGGAAGCAATTACTTCTACCAATGAAGAGATTCAGAATTTGTCCTATGAGTTGTCCTCTGGAA ACACTGATAGAAATGCCCTAAATGAACACCACAACCTATCCAAACCTAGCAGCCCACCTCCTGATAATGTCCTGGTTAAT TCTATGCAATCTCACAGATCACAGTATAATGCTGACAAATTTAGTGATCCGGTAATAACAAATACTGACAGTAAAGGTGC TATATCAGATAATGAGGTTCGTACATTGAAGGAAGAATATAATTTGAGATTGGATTCTCAATCTCAAGTAGTATCAGATA ATGCTGAAGTGGAAGATGATGTGACGTCTTTTGATAATCAGAGACTTAAGGATCCAGAAGTTTTGTGTCGTTCTTATTTG CCAAAGTCGAGTTCCCTTAGTGTCTCCAACCATTCAAGTCCTCATATTCTGCAGCATGGGGAACCTTGTACTGTTATAAA TGCTGGTTCTTTAGCTGCAGATAATAAAAATGGGGATGACTCACTATTACATGGGTCTAATGTATTAGGCAATGGACATC CTGAGAAATTGGTCAGCACCAACTCTTATGGGTTGCTTCATGAGGAAAGGAACGAGCAATGCATTGGAAGATTAGTTAGT GAAGCAGTTAATTGTGGAAGTGATGCTGCTGTGGATAAGGGCGAGAGTAGTATAATTTCAAATATATTGTCCATGGATTT TGATACCTGTGATGACTCACTAATATCATCTGAGAGGTTGGCCAAGCTGTTGGGTGACAACATCAACAACCAGAATGGCC CGCTAAAGAAATCTAGTTCTTGGAAAGTTCAAAGTAATCAATCAAGATTCTCTTTTGCAAGACAGGAGGAATCCAAAATC CAAGCCTTTGATGTACATCCATCTTATGGTGCCAACCAACAATTTCCAAAGAGCCCCTCACTCTTCCAGGGTTTTATGGA AAGAGACTTGTCTTTGGATAGGCTGGGTATTGCAAATGGCTTTCATGCCAATAACCTTGAGGAATCTGGAAATCTAGGCA ATGGTCTTTTTGTTGCTTCTTCTAATAAGCCTTCCTCTGTTTCAAGAGCGCAGTTTTCAGCACCGCCAGGATTTTCAGTT CCAAGCAGGCCACCACCTCCTGGTTTCTCCTCTTATGAGAGAATGGGGCAGGCTTTTGACTCTACTTCTGGTAATTCATT GCTTGACACATCTTTTTCACTGAGAAATTCATATCAGACACCCTCAACTGGAAATGTTGGTGGCGCAGGAGACATTGAAT TTATGGATCCTGCTATTTTGGCAGTTGGTAAAGGGAGACTTCAAGGTACACTAAACAGCCCATCACTGGACGTTCCATCC AATTATTCCTCACAGTTGAACTACTTTGAAAATGAGGCCAGACTTCAATTATTGATGCAAAGATCTCTCTCACCACAGCA AAACCTTCGCGGGAATTCTTTTTCTCCGCTTGGTAATTCTTATGGCATTTCTTCACAGTTAGATCAAACACAAGCCAGTA ATCTGGCATCATATCCTCAGTTGTCCCTGCAGCAATCTCATGATGCAGTCTTTCCAAATGGCCAATGGAATGGGTGGAAT GAAATGCAGAGCAGTAATAATCTTAGTGTAGCTGAGCTTCTGAGAAATGAGAGACTTGGATTTAGCAAATTTTATAGAGG ATTTGATGATTCAAAATATCAGATGCCAAATTCTGGAGATCTGTACAACAGGACATTTGGGATTTGA
Protein sequence (LotjaGi3g1v0270600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDEGERSCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPYDKEKIVGMASNCDRLLAGVH MERKTKSQKAKSKSSEGRKQLSNVRVIQRNLVYIMGLPLNLADEDLLQRREYFGQYGKVLKVSMSRTAAGVVQQFPNNTC SVYITYSKEEEAIRCIQNVHGFVLEGRPLRACYGTTKYCHAWLRNMPCSNSDCLYLHEIGSQEDSFIKDDIVSECTRSRL QQITGAAYNLQRRSGNVLPPPMDDCANNSSGNPIVKNASNNSVSIVRGSPPNGSSGRPMALPAAAWGTRATNCKPAAGGV LCPNGVSNPKPDPISSTLPFSSAVVGTNQASIQSGAAKRPPSSDGSHSITPGVNNNSIDVLGSACEKKLPSDVSSTPVNL NSQLSSLPLAKDSDRGRCSTSETTNSIGSFGHEEAITSTNEEIQNLSYELSSGNTDRNALNEHHNLSKPSSPPPDNVLVN SMQSHRSQYNADKFSDPVITNTDSKGAISDNEVRTLKEEYNLRLDSQSQVVSDNAEVEDDVTSFDNQRLKDPEVLCRSYL PKSSSLSVSNHSSPHILQHGEPCTVINAGSLAADNKNGDDSLLHGSNVLGNGHPEKLVSTNSYGLLHEERNEQCIGRLVS EAVNCGSDAAVDKGESSIISNILSMDFDTCDDSLISSERLAKLLGDNINNQNGPLKKSSSWKVQSNQSRFSFARQEESKI QAFDVHPSYGANQQFPKSPSLFQGFMERDLSLDRLGIANGFHANNLEESGNLGNGLFVASSNKPSSVSRAQFSAPPGFSV PSRPPPPGFSSYERMGQAFDSTSGNSLLDTSFSLRNSYQTPSTGNVGGAGDIEFMDPAILAVGKGRLQGTLNSPSLDVPS NYSSQLNYFENEARLQLLMQRSLSPQQNLRGNSFSPLGNSYGISSQLDQTQASNLASYPQLSLQQSHDAVFPNGQWNGWN EMQSSNNLSVAELLRNERLGFSKFYRGFDDSKYQMPNSGDLYNRTFGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1008 | 1008 | 0.0 | ||
| Gene3D | 1 | 75 | 75 | 2.0E-20 | ||
| PANTHER | 1 | 1008 | 1008 | 0.0 | – | |
| SUPERFAMILY | 3 | 66 | 64 | 1.96E-13 | – | |
| CDD | 9 | 58 | 50 | 7.92116E-23 | ||
| Pfam | 9 | 61 | 53 | 5.6E-21 | – | |
| ProSiteProfiles | 9 | 57 | 49 | 9.671 | ||
| SUPERFAMILY | 104 | 190 | 87 | 9.23E-15 | ||
| CDD | 105 | 204 | 100 | 2.68392E-51 | ||
| ProSiteProfiles | 110 | 196 | 87 | 10.94 | ||
| Gene3D | 111 | 192 | 82 | 7.7E-25 | ||
| SMART | 111 | 192 | 82 | 7.9E-13 | ||
| SMART | 111 | 192 | 82 | 1.5E-4 | ||
| Pfam | 112 | 190 | 79 | 8.5E-7 | ||
| MobiDBLite | 351 | 375 | 25 | - | – | |
| MobiDBLite | 388 | 435 | 48 | - | – | |
| MobiDBLite | 389 | 409 | 21 | - | – | |
| MobiDBLite | 419 | 435 | 17 | - | – | |
| MobiDBLite | 451 | 480 | 30 | - | – | |
| MobiDBLite | 788 | 807 | 20 | - | – | |
| Coils | 1008 | 1008 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Cellular component | CCR4-NOT complex | The evolutionarily conserved CCR4-NOT complex is involved in several aspects of mRNA metabolism, including repression and activation of mRNA initiation, control of mRNA elongation, and the deadenylation and subsequent degradation of mRNA. In Saccharomyces the CCR4-NOT complex comprises a core complex of 9 proteins (Ccr4p, Caf1p, Caf40p, Caf130p, Not1p, Not2p, Not3p, Not4p, and Not5p), Caf4p, Caf16p, and several less well characterized proteins. |
Expression pattern of LotjaGi3g1v0270600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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