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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0370300 |
| Transcript ID | LotjaGi3g1v0370300.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp|Q9ASR1|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr|I1KU21|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0370300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75902347..75905310) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTAAGTTGAATCGACCTTGCTCCTTGATTTTTTGTTTGTTTAATTTGGTTGGATGTTCGTAATCTGAATTGAGATTT GTGTCTTTTTACAGGTGAAGTTCACCGCCGAGGAGCTTCGCCGTATTATGGACCTTAAGCACAACATTCGTAACATGTCT GTCATTGCTCATGTTGATCATGGTAAGAACTAACATAGGTTTTTGTTTTTTGTTTTCTGGTTACTTTCTCTGTGATGCAC TTTCCTGATTGTTGTGATGTGTTCTCTTACTCTATATTTAAGAAGATATAATTGTTTTTTGGTGTTTGGTTGACAAGAAA TTATTAGGGTTATATATCTTTTGAGAAGTTCCCTTGTGTCTTTTTTATTTAGTTCAGTTATCTTTTATGTACCTATGACA TTAACAATGGTTTGTGATGCAATTGTTTAGCTGTGTATCTGGGTGCATTGTATTTTGTCATATTAGAATATCTTCGATTT TCTGGTCTGAATAATGAATTGTTCTTTTGGTTTCTTATTGCAGGGAAATCAACTCTCACTGATTCTCTTGTAGCTGCTGC TGGCATTATTGCACAAGAAGTAGCGGGTGATGTCCGTATGACTGATACCCGTGCAGATGAAGCTGAGCGTGGTATTACAA TTAAGTCCACTGGTATCTCACTCTACTATGAAATGACTGATGAGGCTCTCCAGAGTTTTAAGGGGGAGAGATCGGGCAAT GAGTATCTCATTAATCTCATTGACTCACCTGGGCATGTGGACTTTTCATCTGAGGTTACTGCTGCACTTCGAATTACGGA TGGAGCGCTGGTTGTGGTGGACTGTGTCGAAGGTGTCTGTGTCCAAACTGAAACTGTGCTTCGACAGGCCTTGGGAGAAA GGATTAGACCTGTTCTGACAGTCAATAAGATGGACAGGTGCTTCCTTGAATTGCAGGTGGATGGAGAGGAGGCATATCAG ACTTTTAGCCGTGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAAGACCCACTGCTTGGTGATTGTATGGTCTA TCCAGAGAAAGGAACAGTTGCTTTCTCTGCTGGTCTGCATGGCTGGGCTTTTACTCTGACAAACTTTGCAAAAATGTATG CCTCAAAATTTGGTGTTGACGAGTCAAAGATGATGGAAAGGCTCTGGGGTGAGAATTTTTTTGATCCAGCCACAAAGAAA TGGACCAGCAAGAATACTGGTTCACCTACCTGCAAGCGAGGGTTCGTTCAGTTCTGCTATGAGCCTATCAAGCAGATTAT TAACACTTGTATGAATGATCAGAAGGATAAGCTCTGGCCTATGCTGCAAAAGCTAGGGGTCACCATGAAATCTGAAGAGA AGGACTTGATGGGTAAACCATTGATGAAACGTGTCATGCAGACATGGCTCCCAGCAGCTACTGCACTCTTGGAAATGATG ATCTTTCATCTTCCATCTCCATCAACGGCCCAAAAGTATCGTGTTGAGAATTTGTACGAGGGTCCCCTTGATGATCAATA TGCAGCTGCTATCAGAAACTGTGATCCTGAGGGACCTCTGATGCTTTATGTCTCCAAGATGATTCCTGCATCTGATAAGG GTAGGTTTTTTGCCTTTGGCCGTGTCTTCTCTGGTAAGATTTCAACTGGTTTGAAAGTCAGGATTATGGGACCAAATTAT GTTCCTGGGGAGAAAAAAGACCTGTATACGAAAAGTGTTCAAAGAACTGTCATTTGGATGGGAAAGAAACAGGAGACTGT TGAGGATGTTCCTTGTGGTAACACAGTTGCTTTGGTTGGGCTGGATCAATTTATCACCAAGAATGCTACATTGACAAATG AGAAGGAAGTTGATGCCCACCCAATTCGTGCTATGAAGTTTTCTGTCTCACCTGTTGTCCGTGTCGCTGTTCAGTGTAAG TTTGCATCTGATCTTCCTAAGCTTGTTGAAGGTCTTAAGCGGTTGGCTAAGTCAGATCCTATGGTTGTTTGTACTATTGA GGAGTCTGGAGAACATATTGTTGCTGGTGCAGGAGAGCTTCATCTTGAGATCTGTTTGAAGGACTTGCAAGACGATTTCA TGGGTGGAGCTGAGATTACTAAATCTGACCCTGTAGTGTCTTTCCGAGAGACAGTTCTGGATAGATCATGCCGCACTGTG ATGAGCAAATCACCCAACAAGCACAACCGTCTGTACATGGAAGCAAGACCACTGGAGGACGGGCTTGCTGAAGCCATTGA TGATGGCAAGATTGGACCGAGGGATGACCCCAAAGTTCGTTCCAAAATCTTGTCTGAAGAATATGGTTGGGACAAGGATC TTGCCAAGAAAATCTGGTGTTTCGGACCTGAGACCCTTGGACCAAACATGGTGGTTGATATGTGTAAGGGAGTCCAGTAT TTGAATGAAATCAAGGATTCTGTCGTTGCCGGCTTCCAGTGGGCATCAAAAGAAGGTGCTTTGGCTGAGGAAAACATGAG AGCCATTTGCTTTGAAGTATGTGATGTTGTCCTGCATGCCGATGCCATCCACAGAGGTGGTGGTCAGATCATTCCTACAG CTAGGAGAGTCTTCTATGCTTCACAGTTGACTGCGAAACCCAGACTTCTTGAGCCTGTTTACCTGGTGGAAATCCAGGCT CCTGAGCAAGCCCTTGGTGGTATCTACAGTGTTCTTAACCAGAAACGTGGACATGTCTTTGAGGAAATGCAGAGGCCTGG TACCCCACTTTACAACATCAAAGCATACCTCCCTGTTGTCGAGTCCTTCGGATTCTCCAGCACTTTGAGGGCCGCAACAT CAGGCCAGGCTTTCCCACAGTGTGTCTTTGATCACTGGGATATGATGTCCTCAGATCCATTGGAGCCTGGATCAGGAGCT GCACAGCTTGTTGCTGACATTCGTAGGAGGAAGGGCTTGAAGGAGCAGATGACTCCACTCTCCGAGTTTGAAGACAAGCT TTAA
CDS sequence (LotjaGi3g1v0370300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAGTTCACCGCCGAGGAGCTTCGCCGTATTATGGACCTTAAGCACAACATTCGTAACATGTCTGTCATTGCTCA TGTTGATCATGGGAAATCAACTCTCACTGATTCTCTTGTAGCTGCTGCTGGCATTATTGCACAAGAAGTAGCGGGTGATG TCCGTATGACTGATACCCGTGCAGATGAAGCTGAGCGTGGTATTACAATTAAGTCCACTGGTATCTCACTCTACTATGAA ATGACTGATGAGGCTCTCCAGAGTTTTAAGGGGGAGAGATCGGGCAATGAGTATCTCATTAATCTCATTGACTCACCTGG GCATGTGGACTTTTCATCTGAGGTTACTGCTGCACTTCGAATTACGGATGGAGCGCTGGTTGTGGTGGACTGTGTCGAAG GTGTCTGTGTCCAAACTGAAACTGTGCTTCGACAGGCCTTGGGAGAAAGGATTAGACCTGTTCTGACAGTCAATAAGATG GACAGGTGCTTCCTTGAATTGCAGGTGGATGGAGAGGAGGCATATCAGACTTTTAGCCGTGTTATTGAGAATGCTAATGT GATCATGGCTACATATGAAGACCCACTGCTTGGTGATTGTATGGTCTATCCAGAGAAAGGAACAGTTGCTTTCTCTGCTG GTCTGCATGGCTGGGCTTTTACTCTGACAAACTTTGCAAAAATGTATGCCTCAAAATTTGGTGTTGACGAGTCAAAGATG ATGGAAAGGCTCTGGGGTGAGAATTTTTTTGATCCAGCCACAAAGAAATGGACCAGCAAGAATACTGGTTCACCTACCTG CAAGCGAGGGTTCGTTCAGTTCTGCTATGAGCCTATCAAGCAGATTATTAACACTTGTATGAATGATCAGAAGGATAAGC TCTGGCCTATGCTGCAAAAGCTAGGGGTCACCATGAAATCTGAAGAGAAGGACTTGATGGGTAAACCATTGATGAAACGT GTCATGCAGACATGGCTCCCAGCAGCTACTGCACTCTTGGAAATGATGATCTTTCATCTTCCATCTCCATCAACGGCCCA AAAGTATCGTGTTGAGAATTTGTACGAGGGTCCCCTTGATGATCAATATGCAGCTGCTATCAGAAACTGTGATCCTGAGG GACCTCTGATGCTTTATGTCTCCAAGATGATTCCTGCATCTGATAAGGGTAGGTTTTTTGCCTTTGGCCGTGTCTTCTCT GGTAAGATTTCAACTGGTTTGAAAGTCAGGATTATGGGACCAAATTATGTTCCTGGGGAGAAAAAAGACCTGTATACGAA AAGTGTTCAAAGAACTGTCATTTGGATGGGAAAGAAACAGGAGACTGTTGAGGATGTTCCTTGTGGTAACACAGTTGCTT TGGTTGGGCTGGATCAATTTATCACCAAGAATGCTACATTGACAAATGAGAAGGAAGTTGATGCCCACCCAATTCGTGCT ATGAAGTTTTCTGTCTCACCTGTTGTCCGTGTCGCTGTTCAGTGTAAGTTTGCATCTGATCTTCCTAAGCTTGTTGAAGG TCTTAAGCGGTTGGCTAAGTCAGATCCTATGGTTGTTTGTACTATTGAGGAGTCTGGAGAACATATTGTTGCTGGTGCAG GAGAGCTTCATCTTGAGATCTGTTTGAAGGACTTGCAAGACGATTTCATGGGTGGAGCTGAGATTACTAAATCTGACCCT GTAGTGTCTTTCCGAGAGACAGTTCTGGATAGATCATGCCGCACTGTGATGAGCAAATCACCCAACAAGCACAACCGTCT GTACATGGAAGCAAGACCACTGGAGGACGGGCTTGCTGAAGCCATTGATGATGGCAAGATTGGACCGAGGGATGACCCCA AAGTTCGTTCCAAAATCTTGTCTGAAGAATATGGTTGGGACAAGGATCTTGCCAAGAAAATCTGGTGTTTCGGACCTGAG ACCCTTGGACCAAACATGGTGGTTGATATGTGTAAGGGAGTCCAGTATTTGAATGAAATCAAGGATTCTGTCGTTGCCGG CTTCCAGTGGGCATCAAAAGAAGGTGCTTTGGCTGAGGAAAACATGAGAGCCATTTGCTTTGAAGTATGTGATGTTGTCC TGCATGCCGATGCCATCCACAGAGGTGGTGGTCAGATCATTCCTACAGCTAGGAGAGTCTTCTATGCTTCACAGTTGACT GCGAAACCCAGACTTCTTGAGCCTGTTTACCTGGTGGAAATCCAGGCTCCTGAGCAAGCCCTTGGTGGTATCTACAGTGT TCTTAACCAGAAACGTGGACATGTCTTTGAGGAAATGCAGAGGCCTGGTACCCCACTTTACAACATCAAAGCATACCTCC CTGTTGTCGAGTCCTTCGGATTCTCCAGCACTTTGAGGGCCGCAACATCAGGCCAGGCTTTCCCACAGTGTGTCTTTGAT CACTGGGATATGATGTCCTCAGATCCATTGGAGCCTGGATCAGGAGCTGCACAGCTTGTTGCTGACATTCGTAGGAGGAA GGGCTTGAAGGAGCAGATGACTCCACTCTCCGAGTTTGAAGACAAGCTTTAA
Protein sequence (LotjaGi3g1v0370300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKFTAEELRRIMDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE MTDEALQSFKGERSGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKM DRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDCMVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM MERLWGENFFDPATKKWTSKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKPLMKR VMQTWLPAATALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYAAAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFS GKISTGLKVRIMGPNYVPGEKKDLYTKSVQRTVIWMGKKQETVEDVPCGNTVALVGLDQFITKNATLTNEKEVDAHPIRA MKFSVSPVVRVAVQCKFASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEITKSDP VVSFRETVLDRSCRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGKIGPRDDPKVRSKILSEEYGWDKDLAKKIWCFGPE TLGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLT AKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFD HWDMMSSDPLEPGSGAAQLVADIRRRKGLKEQMTPLSEFEDKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 843 | 843 | 0.0 | – | |
| PANTHER | 1 | 843 | 843 | 0.0 | – | |
| SUPERFAMILY | 4 | 341 | 338 | 1.66E-107 | ||
| Gene3D | 13 | 342 | 330 | 6.2E-188 | – | |
| Pfam | 17 | 342 | 326 | 1.7E-64 | ||
| ProSiteProfiles | 17 | 344 | 328 | 53.547 | ||
| TIGRFAM | 20 | 176 | 157 | 9.0E-17 | ||
| CDD | 20 | 230 | 211 | 6.25419E-123 | – | |
| PRINTS | 21 | 34 | 14 | 4.0E-14 | ||
| ProSitePatterns | 58 | 73 | 16 | - | ||
| PRINTS | 65 | 73 | 9 | 4.0E-14 | ||
| Gene3D | 67 | 469 | 403 | 6.2E-188 | – | |
| PRINTS | 101 | 111 | 11 | 4.0E-14 | ||
| PRINTS | 117 | 128 | 12 | 4.0E-14 | ||
| PRINTS | 153 | 162 | 10 | 4.0E-14 | ||
| Gene3D | 222 | 326 | 105 | 6.2E-188 | – | |
| SUPERFAMILY | 342 | 476 | 135 | 5.08E-41 | ||
| CDD | 375 | 470 | 96 | 1.1467E-42 | – | |
| Pfam | 394 | 467 | 74 | 4.0E-10 | ||
| SUPERFAMILY | 484 | 560 | 77 | 6.47E-18 | ||
| Gene3D | 485 | 563 | 79 | 2.9E-32 | – | |
| Pfam | 487 | 549 | 63 | 1.1E-11 | ||
| CDD | 487 | 559 | 73 | 2.24236E-37 | – | |
| CDD | 559 | 731 | 173 | 1.59862E-99 | – | |
| SUPERFAMILY | 562 | 726 | 165 | 4.3E-65 | ||
| Gene3D | 565 | 829 | 265 | 5.9E-123 | – | |
| Gene3D | 571 | 833 | 263 | 5.9E-123 | ||
| SMART | 605 | 722 | 118 | 5.1E-25 | ||
| Pfam | 610 | 722 | 113 | 7.9E-30 | ||
| Pfam | 724 | 810 | 87 | 2.7E-20 | ||
| SMART | 724 | 813 | 90 | 3.2E-18 | ||
| CDD | 727 | 805 | 79 | 1.19281E-48 | – | |
| SUPERFAMILY | 727 | 838 | 112 | 1.29E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0370300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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