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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0370300 |
| Transcript ID | LotjaGi3g1v0370300.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor; TAIR: AT1G56070.1 Ribosomal protein S5/Elongation factor G/III/V family protein; Swiss-Prot: sp|Q9ASR1|EF2_ARATH Elongation factor 2; TrEMBL-Plants: tr|I1KU21|I1KU21_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0370300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75902347..75905339) extracted from Lotus japonicus Gifu genome v1.2.
TTTTCTGTGGACAACAAACACTAGTCAAAATGGTAAGTTGAATCGACCTTGCTCCTTGATTTTTTGTTTGTTTAATTTGG TTGGATGTTCGTAATCTGAATTGAGATTTGTGTCTTTTTACAGGTGAAGTTCACCGCCGAGGAGCTTCGCCGTATTATGG ACCTTAAGCACAACATTCGTAACATGTCTGTCATTGCTCATGTTGATCATGGTAAGAACTAACATAGGTTTTTGTTTTTT GTTTTCTGGTTACTTTCTCTGTGATGCACTTTCCTGATTGTTGTGATGTGTTCTCTTACTCTATATTTAAGAAGATATAA TTGTTTTTTGGTGTTTGGTTGACAAGAAATTATTAGGGTTATATATCTTTTGAGAAGTTCCCTTGTGTCTTTTTTATTTA GTTCAGTTATCTTTTATGTACCTATGACATTAACAATGGTTTGTGATGCAATTGTTTAGCTGTGTATCTGGGTGCATTGT ATTTTGTCATATTAGAATATCTTCGATTTTCTGGTCTGAATAATGAATTGTTCTTTTGGTTTCTTATTGCAGGGAAATCA ACTCTCACTGATTCTCTTGTAGCTGCTGCTGGCATTATTGCACAAGAAGTAGCGGGTGATGTCCGTATGACTGATACCCG TGCAGATGAAGCTGAGCGTGGTATTACAATTAAGTCCACTGGTATCTCACTCTACTATGAAATGACTGATGAGGCTCTCC AGAGTTTTAAGGGGGAGAGATCGGGCAATGAGTATCTCATTAATCTCATTGACTCACCTGGGCATGTGGACTTTTCATCT GAGGTTACTGCTGCACTTCGAATTACGGATGGAGCGCTGGTTGTGGTGGACTGTGTCGAAGGTGTCTGTGTCCAAACTGA AACTGTGCTTCGACAGGCCTTGGGAGAAAGGATTAGACCTGTTCTGACAGTCAATAAGATGGACAGGTGCTTCCTTGAAT TGCAGGTGGATGGAGAGGAGGCATATCAGACTTTTAGCCGTGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAA GACCCACTGCTTGGTGATTGTATGGTCTATCCAGAGAAAGGAACAGTTGCTTTCTCTGCTGGTCTGCATGGCTGGGCTTT TACTCTGACAAACTTTGCAAAAATGTATGCCTCAAAATTTGGTGTTGACGAGTCAAAGATGATGGAAAGGCTCTGGGGTG AGAATTTTTTTGATCCAGCCACAAAGAAATGGACCAGCAAGAATACTGGTTCACCTACCTGCAAGCGAGGGTTCGTTCAG TTCTGCTATGAGCCTATCAAGCAGATTATTAACACTTGTATGAATGATCAGAAGGATAAGCTCTGGCCTATGCTGCAAAA GCTAGGGGTCACCATGAAATCTGAAGAGAAGGACTTGATGGGTAAACCATTGATGAAACGTGTCATGCAGACATGGCTCC CAGCAGCTACTGCACTCTTGGAAATGATGATCTTTCATCTTCCATCTCCATCAACGGCCCAAAAGTATCGTGTTGAGAAT TTGTACGAGGGTCCCCTTGATGATCAATATGCAGCTGCTATCAGAAACTGTGATCCTGAGGGACCTCTGATGCTTTATGT CTCCAAGATGATTCCTGCATCTGATAAGGGTAGGTTTTTTGCCTTTGGCCGTGTCTTCTCTGGTAAGATTTCAACTGGTT TGAAAGTCAGGATTATGGGACCAAATTATGTTCCTGGGGAGAAAAAAGACCTGTATACGAAAAGTGTTCAAAGAACTGTC ATTTGGATGGGAAAGAAACAGGAGACTGTTGAGGATGTTCCTTGTGGTAACACAGTTGCTTTGGTTGGGCTGGATCAATT TATCACCAAGAATGCTACATTGACAAATGAGAAGGAAGTTGATGCCCACCCAATTCGTGCTATGAAGTTTTCTGTCTCAC CTGTTGTCCGTGTCGCTGTTCAGTGTAAGTTTGCATCTGATCTTCCTAAGCTTGTTGAAGGTCTTAAGCGGTTGGCTAAG TCAGATCCTATGGTTGTTTGTACTATTGAGGAGTCTGGAGAACATATTGTTGCTGGTGCAGGAGAGCTTCATCTTGAGAT CTGTTTGAAGGACTTGCAAGACGATTTCATGGGTGGAGCTGAGATTACTAAATCTGACCCTGTAGTGTCTTTCCGAGAGA CAGTTCTGGATAGATCATGCCGCACTGTGATGAGCAAATCACCCAACAAGCACAACCGTCTGTACATGGAAGCAAGACCA CTGGAGGACGGGCTTGCTGAAGCCATTGATGATGGCAAGATTGGACCGAGGGATGACCCCAAAGTTCGTTCCAAAATCTT GTCTGAAGAATATGGTTGGGACAAGGATCTTGCCAAGAAAATCTGGTGTTTCGGACCTGAGACCCTTGGACCAAACATGG TGGTTGATATGTGTAAGGGAGTCCAGTATTTGAATGAAATCAAGGATTCTGTCGTTGCCGGCTTCCAGTGGGCATCAAAA GAAGGTGCTTTGGCTGAGGAAAACATGAGAGCCATTTGCTTTGAAGTATGTGATGTTGTCCTGCATGCCGATGCCATCCA CAGAGGTGGTGGTCAGATCATTCCTACAGCTAGGAGAGTCTTCTATGCTTCACAGTTGACTGCGAAACCCAGACTTCTTG AGCCTGTTTACCTGGTGGAAATCCAGGCTCCTGAGCAAGCCCTTGGTGGTATCTACAGTGTTCTTAACCAGAAACGTGGA CATGTCTTTGAGGAAATGCAGAGGCCTGGTACCCCACTTTACAACATCAAAGCATACCTCCCTGTTGTCGAGTCCTTCGG ATTCTCCAGCACTTTGAGGGCCGCAACATCAGGCCAGGCTTTCCCACAGTGTGTCTTTGATCACTGGGATATGATGTCCT CAGATCCATTGGAGCCTGGATCAGGAGCTGCACAGCTTGTTGCTGACATTCGTAGGAGGAAGGGCTTGAAGGAGCAGATG ACTCCACTCTCCGAGTTTGAAGACAAGCTTTAA
CDS sequence (LotjaGi3g1v0370300.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTGTGTCTTTTTACAGGTGAAGTTCACCGCCGAGGAGCTTCGCCGTATTATGGACCTTAAGCACAACATTCGTAA CATGTCTGTCATTGCTCATGTTGATCATGGGAAATCAACTCTCACTGATTCTCTTGTAGCTGCTGCTGGCATTATTGCAC AAGAAGTAGCGGGTGATGTCCGTATGACTGATACCCGTGCAGATGAAGCTGAGCGTGGTATTACAATTAAGTCCACTGGT ATCTCACTCTACTATGAAATGACTGATGAGGCTCTCCAGAGTTTTAAGGGGGAGAGATCGGGCAATGAGTATCTCATTAA TCTCATTGACTCACCTGGGCATGTGGACTTTTCATCTGAGGTTACTGCTGCACTTCGAATTACGGATGGAGCGCTGGTTG TGGTGGACTGTGTCGAAGGTGTCTGTGTCCAAACTGAAACTGTGCTTCGACAGGCCTTGGGAGAAAGGATTAGACCTGTT CTGACAGTCAATAAGATGGACAGGTGCTTCCTTGAATTGCAGGTGGATGGAGAGGAGGCATATCAGACTTTTAGCCGTGT TATTGAGAATGCTAATGTGATCATGGCTACATATGAAGACCCACTGCTTGGTGATTGTATGGTCTATCCAGAGAAAGGAA CAGTTGCTTTCTCTGCTGGTCTGCATGGCTGGGCTTTTACTCTGACAAACTTTGCAAAAATGTATGCCTCAAAATTTGGT GTTGACGAGTCAAAGATGATGGAAAGGCTCTGGGGTGAGAATTTTTTTGATCCAGCCACAAAGAAATGGACCAGCAAGAA TACTGGTTCACCTACCTGCAAGCGAGGGTTCGTTCAGTTCTGCTATGAGCCTATCAAGCAGATTATTAACACTTGTATGA ATGATCAGAAGGATAAGCTCTGGCCTATGCTGCAAAAGCTAGGGGTCACCATGAAATCTGAAGAGAAGGACTTGATGGGT AAACCATTGATGAAACGTGTCATGCAGACATGGCTCCCAGCAGCTACTGCACTCTTGGAAATGATGATCTTTCATCTTCC ATCTCCATCAACGGCCCAAAAGTATCGTGTTGAGAATTTGTACGAGGGTCCCCTTGATGATCAATATGCAGCTGCTATCA GAAACTGTGATCCTGAGGGACCTCTGATGCTTTATGTCTCCAAGATGATTCCTGCATCTGATAAGGGTAGGTTTTTTGCC TTTGGCCGTGTCTTCTCTGGTAAGATTTCAACTGGTTTGAAAGTCAGGATTATGGGACCAAATTATGTTCCTGGGGAGAA AAAAGACCTGTATACGAAAAGTGTTCAAAGAACTGTCATTTGGATGGGAAAGAAACAGGAGACTGTTGAGGATGTTCCTT GTGGTAACACAGTTGCTTTGGTTGGGCTGGATCAATTTATCACCAAGAATGCTACATTGACAAATGAGAAGGAAGTTGAT GCCCACCCAATTCGTGCTATGAAGTTTTCTGTCTCACCTGTTGTCCGTGTCGCTGTTCAGTGTAAGTTTGCATCTGATCT TCCTAAGCTTGTTGAAGGTCTTAAGCGGTTGGCTAAGTCAGATCCTATGGTTGTTTGTACTATTGAGGAGTCTGGAGAAC ATATTGTTGCTGGTGCAGGAGAGCTTCATCTTGAGATCTGTTTGAAGGACTTGCAAGACGATTTCATGGGTGGAGCTGAG ATTACTAAATCTGACCCTGTAGTGTCTTTCCGAGAGACAGTTCTGGATAGATCATGCCGCACTGTGATGAGCAAATCACC CAACAAGCACAACCGTCTGTACATGGAAGCAAGACCACTGGAGGACGGGCTTGCTGAAGCCATTGATGATGGCAAGATTG GACCGAGGGATGACCCCAAAGTTCGTTCCAAAATCTTGTCTGAAGAATATGGTTGGGACAAGGATCTTGCCAAGAAAATC TGGTGTTTCGGACCTGAGACCCTTGGACCAAACATGGTGGTTGATATGTGTAAGGGAGTCCAGTATTTGAATGAAATCAA GGATTCTGTCGTTGCCGGCTTCCAGTGGGCATCAAAAGAAGGTGCTTTGGCTGAGGAAAACATGAGAGCCATTTGCTTTG AAGTATGTGATGTTGTCCTGCATGCCGATGCCATCCACAGAGGTGGTGGTCAGATCATTCCTACAGCTAGGAGAGTCTTC TATGCTTCACAGTTGACTGCGAAACCCAGACTTCTTGAGCCTGTTTACCTGGTGGAAATCCAGGCTCCTGAGCAAGCCCT TGGTGGTATCTACAGTGTTCTTAACCAGAAACGTGGACATGTCTTTGAGGAAATGCAGAGGCCTGGTACCCCACTTTACA ACATCAAAGCATACCTCCCTGTTGTCGAGTCCTTCGGATTCTCCAGCACTTTGAGGGCCGCAACATCAGGCCAGGCTTTC CCACAGTGTGTCTTTGATCACTGGGATATGATGTCCTCAGATCCATTGGAGCCTGGATCAGGAGCTGCACAGCTTGTTGC TGACATTCGTAGGAGGAAGGGCTTGAAGGAGCAGATGACTCCACTCTCCGAGTTTGAAGACAAGCTTTAA
Protein sequence (LotjaGi3g1v0370300.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MICVFLQVKFTAEELRRIMDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTG ISLYYEMTDEALQSFKGERSGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPV LTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDCMVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFG VDESKMMERLWGENFFDPATKKWTSKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMG KPLMKRVMQTWLPAATALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYAAAIRNCDPEGPLMLYVSKMIPASDKGRFFA FGRVFSGKISTGLKVRIMGPNYVPGEKKDLYTKSVQRTVIWMGKKQETVEDVPCGNTVALVGLDQFITKNATLTNEKEVD AHPIRAMKFSVSPVVRVAVQCKFASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAE ITKSDPVVSFRETVLDRSCRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGKIGPRDDPKVRSKILSEEYGWDKDLAKKI WCFGPETLGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQIIPTARRVF YASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAF PQCVFDHWDMMSSDPLEPGSGAAQLVADIRRRKGLKEQMTPLSEFEDKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 849 | 842 | 0.0 | – | |
| PANTHER | 8 | 849 | 842 | 0.0 | – | |
| SUPERFAMILY | 10 | 347 | 338 | 1.71E-107 | ||
| Gene3D | 19 | 348 | 330 | 6.3E-188 | – | |
| Pfam | 23 | 348 | 326 | 1.8E-64 | ||
| ProSiteProfiles | 23 | 350 | 328 | 53.547 | ||
| TIGRFAM | 26 | 182 | 157 | 9.1E-17 | ||
| CDD | 26 | 236 | 211 | 8.5041E-123 | – | |
| PRINTS | 27 | 40 | 14 | 4.1E-14 | ||
| ProSitePatterns | 64 | 79 | 16 | - | ||
| PRINTS | 71 | 79 | 9 | 4.1E-14 | ||
| Gene3D | 73 | 475 | 403 | 6.3E-188 | – | |
| PRINTS | 107 | 117 | 11 | 4.1E-14 | ||
| PRINTS | 123 | 134 | 12 | 4.1E-14 | ||
| PRINTS | 159 | 168 | 10 | 4.1E-14 | ||
| Gene3D | 228 | 332 | 105 | 6.3E-188 | – | |
| SUPERFAMILY | 348 | 482 | 135 | 5.08E-41 | ||
| CDD | 381 | 476 | 96 | 1.16325E-42 | – | |
| Pfam | 400 | 473 | 74 | 4.1E-10 | ||
| SUPERFAMILY | 490 | 566 | 77 | 6.47E-18 | ||
| Gene3D | 491 | 569 | 79 | 2.9E-32 | – | |
| Pfam | 493 | 555 | 63 | 1.1E-11 | ||
| CDD | 493 | 565 | 73 | 2.21882E-37 | – | |
| CDD | 565 | 737 | 173 | 1.80658E-99 | – | |
| SUPERFAMILY | 568 | 732 | 165 | 4.3E-65 | ||
| Gene3D | 571 | 835 | 265 | 6.0E-123 | – | |
| Gene3D | 577 | 839 | 263 | 6.0E-123 | ||
| SMART | 611 | 728 | 118 | 5.1E-25 | ||
| Pfam | 616 | 728 | 113 | 8.0E-30 | ||
| Pfam | 730 | 816 | 87 | 2.7E-20 | ||
| SMART | 730 | 819 | 90 | 3.2E-18 | ||
| SUPERFAMILY | 733 | 844 | 112 | 1.29E-30 | ||
| CDD | 733 | 811 | 79 | 1.22219E-48 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0370300.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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