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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0371400 |
| Transcript ID | LotjaGi3g1v0371400.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT1G51940.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; Swiss-Prot: sp|F4IB81|LYK3_ARATH LysM domain receptor-like kinase 3; TrEMBL-Plants: tr|D3KTZ5|D3KTZ5_LOTJA LysM type receptor kinase; Found in the gene: LotjaGi3g1v0371400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:76137748..76144932) extracted from Lotus japonicus Gifu genome v1.2.
ATGATTCCTTTAGCAAAACCCCAATGGAAGTTTCTCCTCCTTTTTCTGGTTTTCATTCATTTCAAGAGAACCAGTTCTTA CCCTATGGAACCCATGAACTGTACGGACACAAGCCGTGTCTGCACTTCTTTCATGGCCTTTAAGCCTCAACCGAAGCAGA CACTGGCGGAGATACAGAGCATGTTTGATGTGTTGCCTGGTGACATCACTGTTGAAGGCAATGGCTGGGACTACATGTTC ATCAGGAAGAATTGTTCTTGTGCTGCTGGTATCAAGAAATATGTGTCTAACACCACCTTCACTGTGAAATCTAATGAAGG GTGGGTGTATGATTTGGTAATGGATGCCTATGATGGGCTTGTGATCCTTCCTAATACCACAAGGAGGGCAAGGAATGGTG CTGTTATCTCTCTGAGGTTGTTCTGTGGCTGTTCCAGTGGACTTTGGAACTATCTGATGAGTTATGTGATGACAGATGGG GATAGTGTCGAATCTCTGGCGAGCAGATTCGGGGTTAGTATGGGCAGCATTGAGTCTGTAAATGGCATTGGTGATCCTGA TAATGTGACTGTGGGCTCACTTTATTACATACCTATGAATTCGGGTTAGTCCTTCCTTGCAATCTTCTTCAATCCTTTTT TTGGAATGTGCTTGTATGTGTTATTGATTTTTAGGTATGTGCATACCTTTTTGAGAGGGAGTTTTTGGTTCTTTTCAGTT TTGGTTGAGGATGCTTTAGTTGTGCATTGCTTTGTGAAGTGGGATATTGTTCATTTTAGGACAACTGGGTGGAATGTGAG AATTGGGGCCTACTTGTATATTGTGTTTGGAAAGCACTAGTACAATGGTGTATCTATCCCTCAAAACTGCGTAAATCATG AGCCACTTACTTAGTAGTTTTTCGAGTTTATACGCTAATTTATCCATTTTCAATGCTGAATCAAACACCCACTTTACTTA GTAGAGTAATTTATGAGGATTCTGTAATTGGGATTTGGGGAGAAGTGACTGAATATAGTGCTTTTTGAGTATTCTAGTTT AGGTGTTCTTTGATCACAGTGTGTGTTTGGAAGTCTGGTAGATTTCCATGTTGGGAGTTCTGCGGTTAGATGCTCCATAA TGTCTTCTAGGCAGAAGCTATAAAATGTAGCTTATGGAATTACTGTGCTTTGGATTGCGCCCACTGTCAATCTAAACACG CTAGCTTTTGTGGGAGGAGAAGTGATCCTTAAGCATTTAAAAGTGAAACCAAACATGCTAGGATTGGAAATAGGAGCTTC CCCGTGATTAATTGGAACTTCAAGACATGGTATGAAGAAGTTAGCAAATCATATATATGTAAAGATTATGAGTACAGGCA ACAAACTAATTATCAAGCACAACATATTTCAAATAGGTGGTTAGGAATTGGGAAAATCTAGGTTGTCTTCAGTGGTAGCA TTTAATGTGTTGAGAAACTCATACACGTATGGGAAATACCTCATATCAACTGGTATAATTTTAAAGCAGAAAATTGATTA ACTTTTGTGCATTGATCACTTAGACAAGGAACTGGATTGAAGGATTGCAGACATCTATGTTTTTAAACCTAAGGCTTTTT TGTACCTTCTCTTGCCCTTGATGGGTATTGCATTCCATTTCCAAATAAGATGAATTTTGATATTAAATCAACTTGCAAAG TGTAGTATGATCTTTCTAGCAATTTGTTGTTAGAGTGGTTTATGCTAGTCTCTCCGTGCTGAGTTAAAACTGAAGAATAT CCCGTTTTCTATGTTGATGTATTGTCAAATTGTCTAAGACATAGGGGAGCTAAGTCAAGGAACATTATCTCTGGGTTATA GTTTATTTACTTTACATGGAAACAAATAGGATTAGCTCCTCTAAGGGAGGTGCATTTGTTATATATTCTTTAATGCAGTT TTATTTGGGAAAGTCAGAGTCAAACAATGTTCACTTTATTGAACTGACCCAGCTGAAACTGCTTAGTATGAACCTATATC CACTGCACCAATGTTTTACATGCAACGGATTGTTTGTATTCCCTGATCATTAATTAATGAGGAACCAATCTTCCTGTTGT ATTTGTGAAACACAATAATATTCCCTGACCACAACTTGAATTATTTCACTGCATTGCAGTTCCTGGTGATCCTTATCCCC TGAAGAATGCTTCTCCACCAGCTCCTGTTCCTACCCCATCTGTTGATAATTTTTCAGGTATTGATCAACATATGCTATTA AAAGGAAAATGATTTCTTTTTTCATTTAGGTTTTAGTGTGTAGTTTGTTGCAGAAGAAAAAAAAAGGGTTTCAGGCATAC TATCTTTATCTTGTTCTTGTGCTTTTAGTTTAAACTGTTTGTTTTGAAAATTCAAATTCCAGAGAAAAATTTATCATGCT GATGCCTATGCTCAAGTTTATACCAGTTGGCTTCAAATGAATAAAAGTTATTTTAATGGCTTAATTGTAAATTGAAGTGA TGAGCTTCTTGTAACTGCCATGTAGATCTCTTTGGAGGAGACACATTTTGCGGCTATGAAATGAAACAAAAAGACAAATA GTTATATGAAGCTTACTTATGACAGATGATATATAAGTAGTCTTGGGTTTGGCTTAGGTGGTAGAGTGGTCTGGGGATGC TACAAAGTCTTGTTTACATCTTGCTAAGCAAATTAAATGATTATGAAAATGAGTAAAAAAAATGATATTATCATGTAGCC GCAGCCGCTGCTACTAATTTTATTTTGATGACTTCTGCTTCGAGTTACTGATCATTGTCCATTATTTAATGAATTGCAAC ACTAATTTACTCATCTTAGAATCACCCATATATATATTTTTCTTTTGCTTCTTCATCCACTAATTTTCTTAATTTTAATT TTATTCTTTTGGGGGTATTTTTCATATAAATACTGAGCCTACATAGAATGTTTCTAGTTATCTGTGCAATAATAGAATGT TCTCTTTATTTATTTAATCTATCCATGTTTTTATCACAGGTGATCAAGTCGATCATAAGGCTCATGTACCATATGGATGG ATTATTGGGGGTCTAGGAGTTGGTCTTTTTCTGATAATATTAAGCGTAATGCTCTGTGTTTGTATGAGATCATCAAGTTG TTTTGGTGAAGCCAGAAGTCATGAAAAAGATGCTGACGGAAAGATCTCTCATAAATTCCATATTCTTCGGAATCCAAGTT TCTTTTGTGGTTCCGGAAGGTACATCTGTGGCAAACATGTAGGCCAGAAGCAAAAAGATGGTGAATCCAGCAATCACACG ATTACCATTCCCAAAGCTTCAAGTAACTAACTTCTTATTAGATTCTCAAGTTGTGTATTGTACCTCTGGGTTGCAGCTTG TAGTAATCATTTTTGCATGTATCTGTTTTTAACATGAATATGCATAGTTACAATCACAAGCAAGAAAACAAGTGCACAAT TCTGAGGATTTGTGTTTGATAAATCCTCAAAATTCTGAGTGCTGTTATGTTATTCAAAATTTTGAGGATTTAGGTTTTGA AGTTCTGTATCCGTCAGTGCATGGAAGCTGTTGGTAGATGATGCAAGTTGGTAGTGTTTCAGTCAGAACATTCATTGGCA TCTAGTTTTCATGTTAATTTTGTTCTTGGGTATGCTTATTTCAACTTTAAAAAAAGGCTCTTTTATGGTATATCTTTTTC TGAGAGCTTTTATCCGATACTACTATTTTGAGGGAGGGAGAGAAGTACTAAAAACAGAATTTTGAGGTTTATGTTTTTTT CTTTGAAAAATTTACAAACTTTTACCAACATATTTTTTTAACTAAAGCATATTTTTTTTTTGTGATTTTATTATTTGTTC AAATATTCCTTTAAAAACATGATTGGTGGTCGCACAGTCTCTCCAATATAGTTAGTGTGCATAAATATGTATGTTTTAAT TCTGTTGGTAAGACCTGTACTTTTTAATACATGAATATTAGATTTAGAAAGCTTTGATCGTCTATCAGGGTATAGTATAG CTTGCATTCAGTTTCATTCTGGCTATCAAATTGATTATACATAAACTAGACGGTAATTTTACTCTTACATCTTTATGATG CAAAATCAAAGGAAAGATGCATCATTATCAACTTGCAACTAACTCGTAGTTTTAGATTCTGAATATTATTCATGAATATG TATTATCAGTCCAACCCCCAAAATATGTGAAATTCTTTGAACTTGGATATATAACTGTTGGTTTTATTATACTCTGAATA CCGGTATTAATGATTTGTCATATATAATAAGAGTTTATGCATAATTTGGTTACGTCTGCTATTGCAGCTTTGGGGCCTGA CATATTTGACATGGATAAGCCTGTAGTTTTTACATACGATGAGATTTTCCCCTCAACTGATGGATTCTCTGATTCAAATC TACTTGGGCATGGAACATATGGATCTGTTTACTATTGCCTCCTTCGTGACCAGGTTTGTTGCTGTATACTTCATGTTTTA TATAGTATAAAGTAGGCATGTTTCTCATACCATGTTTACTTGAATCCTTGTAGGAAGTTGCTATTAAAAGAATGACTGCT ACAAAAACAAAAGAATTTATGGCAGAGATAAAAGTTCTGTGCAAGGTTCATCATGCTAATCTGGTAATTTCTTTTTAGAT CAGAATAACTAATATGTGTTGATTTTGGAGCCAATTGCATGGTGCATTTCACAAGTCTGACTTGTATTTTTTATTACTTT TATCAAGGTAGAATTGATTGGCTATGCAGCAAGTCATGATGAGTTTTTCCTAGTTTATGAATATGCTCAAAAGGGTTCAC TCAGAAGCCATTTGCATGATCCTCAAAATAAGGGTAAGATAATGCATCCATGCTTTGGTCTGTGAATTATTAATCACTAC TATGTGTGTTGACCTGGTGCTTGTAAATTTAGATATAGATCTTAAATTTTTGAAACTTTAATAAAATGCTTTCTTTAGTG CAATTATTGAAATTAACTGCTTAAATCATTTTCCCCAGTTCTTGTGATCAAATGTGATACTATGCAATAAGAAAAATGGC ATTTCGGATTTCCCCCCCAACAGTGGGGTACAGTCTCATACTACCATTTATTTTAAGGGCACTCTTTTGAAACATAAATA ATTTTGGGTGTTGGTTTTAATACCACCCCAATGCATTTTCATGCCATCCCCATTCCAAAAATACCTCTGTGAAAATTTTC ATTCCTCACTTTGTAAGTGTGAAAATATTTTCACATGTCTGAAAATGCATTCCGCACTTTGTAAGTGTGGAGATATGAAT ACATTCCGCACTTGTAAGTGCGGAAATATTTTCACAGGTCTGAAAATGCGTTCCGCACTTTGTAAGTGTGGAGACATGAA TACATTCTGCACTTGTAAGTGTGGAAACATGAATACATTCTGCACTTGTAAGTGTGGAAACATGAATACATTCCGCACTT GTATGTGTGGCAGTATTTTCACAGGTCTGAAAAGGCATTCCGCACTTTGTAAGTGTGGAGACATAAATACATTCCGCATT TATCAGGGGATGCAAATGCCAATCAGAGAGCATTTTAGACAATCAACTGCAAATGCCAATCAACTGTCCAGGTTCATCCA GCCAACTAATAAACTACAATTTTTTACCATGACCAATTGATTATCTACAATTGCTTGCATTTTAGACATCTTTTGTTTGG GGCCATTCAGAGACTATCAAGCGGATTCAGATTCTGTTGGTTCTAGCTGATATTTCACTATATCGCAATTTGTTGTGTTG AAATACTCGAGTTCAATGTTGCATTGCATGAGAAAGCTACCAATATATATAGTTCATGACATTTTTTGTCTTGCTTGTAG GGCATTCCCCTCTTTCTTGGATCATGAGGGTGCAGATCGCACTTGACGCTGCAAGGGGCCTTGAATACATTCATGAACAC ACAAAAACTCATTATGTCCACCGTGATATCAAGACAAGCAACATTTTACTGGATGCTTCCTTTAGAGCAAAGGTAGTAAT AAATGTATAGACTGATCATTTTAAATTGTTTTATTACACTGGTTGATTGTCATTTGTTGCTGATTTCCCTCTATTTGTGC AGATTTCAGATTTTGGATTAGCAAAACTTGTTGGGAAAACAAATGAAGGAGAAGTATCAACTACCAAAGTTGTTGGTACA TATGGATATCTTGCTCCAGAGTAATTAATATCCTGACTTTTTTTTTTCCTCAAATTTATTCCTCCTACATGAAAAAAAAC TAATTTTATCTCTAATATTTTGCAGATACTTGAGTAATGGCCTTGCAACTACCAAAAGTGATGTATATGCATTTGGTGTT GTCCTTTTTGAGATTATATCAGGAAAGGAGGCCATCATTCGAACAGAAGGCACAGTGACAAAAAATCCGGAAAGACGTTC ACTGGCTTCAGTAGTAAGTTCTGCTTATGAGACGTCATTATGAATAACTGTTCTATATGCATCCAGTTCTGCCTTTGCTC ATCAGAAAATATTGCAATGTCTGGAAAGTCACCAAATCAGATCTATAATTCTATATTAGTAATATATTTTCACAGTGAAC TTATTAAACATGATGAGGATTTATTAAATACTTCTCTGCTTTTCTGATGCATTGCATCTTTTATTCAAAGCTTGACTGCA GCTTATGTGCTATTCTCTGTATTAGTTGTTGGTTTTGTACTTTCTTAAATATCTACATTTCTCATTGTTTAATTTATGAC AAATTCCTTTGTTTTTTTGAGTTGCAGCTATTTCCTGTGGTATTGCCTTAACGTTTGTCAAATTGCAGATGTTGGCAGCT CTTAGGAACTCACCTGATTCCATGAGCATGTCAGGCGTGAGAGATTATATTGATCCAAATATGATGAATCTGTTTCCCCA TGATTGTGTATTTAAGGCAAGTTAGTTTCTCCATTTTCACCCATTTTTCTTATGCTTTAATCCAGAGAACATTTTTTATC CAATAACTGTTGAGTCTCATTCTTCTTTTGTTATTTTGGTGTGTTACTTGCTGTGCGTAGATGGCCATGCTGGCAAAGCA ATGCGTGGACGATGATCCAATCTTACGACCTGATATGAAGCAGATTGTGATTTCTCTCTCACAGATTCTCCTTTCTACTG TTGAGTGGGAAGCCACTCTAGCTGGGAATAGCCAAGTATTCAGTGGCCTTGTTCAGGGAAGATAG
CDS sequence (LotjaGi3g1v0371400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCCTTTAGCAAAACCCCAATGGAAGTTTCTCCTCCTTTTTCTGGTTTTCATTCATTTCAAGAGAACCAGTTCTTA CCCTATGGAACCCATGAACTGTACGGACACAAGCCGTGTCTGCACTTCTTTCATGGCCTTTAAGCCTCAACCGAAGCAGA CACTGGCGGAGATACAGAGCATGTTTGATGTGTTGCCTGGTGACATCACTGTTGAAGGCAATGGCTGGGACTACATGTTC ATCAGGAAGAATTGTTCTTGTGCTGCTGGTATCAAGAAATATGTGTCTAACACCACCTTCACTGTGAAATCTAATGAAGG GTGGGTGTATGATTTGGTAATGGATGCCTATGATGGGCTTGTGATCCTTCCTAATACCACAAGGAGGGCAAGGAATGGTG CTGTTATCTCTCTGAGGTTGTTCTGTGGCTGTTCCAGTGGACTTTGGAACTATCTGATGAGTTATGTGATGACAGATGGG GATAGTGTCGAATCTCTGGCGAGCAGATTCGGGGTTAGTATGGGCAGCATTGAGTCTGTAAATGGCATTGGTGATCCTGA TAATGTGACTGTGGGCTCACTTTATTACATACCTATGAATTCGGTTCCTGGTGATCCTTATCCCCTGAAGAATGCTTCTC CACCAGCTCCTGTTCCTACCCCATCTGTTGATAATTTTTCAGGTGATCAAGTCGATCATAAGGCTCATGTACCATATGGA TGGATTATTGGGGGTCTAGGAGTTGGTCTTTTTCTGATAATATTAAGCGTAATGCTCTGTGTTTGTATGAGATCATCAAG TTGTTTTGGTGAAGCCAGAAGTCATGAAAAAGATGCTGACGGAAAGATCTCTCATAAATTCCATATTCTTCGGAATCCAA GTTTCTTTTGTGGTTCCGGAAGGTACATCTGTGGCAAACATGTAGGCCAGAAGCAAAAAGATGGTGAATCCAGCAATCAC ACGATTACCATTCCCAAAGCTTCAACTTTGGGGCCTGACATATTTGACATGGATAAGCCTGTAGTTTTTACATACGATGA GATTTTCCCCTCAACTGATGGATTCTCTGATTCAAATCTACTTGGGCATGGAACATATGGATCTGTTTACTATTGCCTCC TTCGTGACCAGGAAGTTGCTATTAAAAGAATGACTGCTACAAAAACAAAAGAATTTATGGCAGAGATAAAAGTTCTGTGC AAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCAAGTCATGATGAGTTTTTCCTAGTTTATGAATATGC TCAAAAGGGTTCACTCAGAAGCCATTTGCATGATCCTCAAAATAAGGGGCATTCCCCTCTTTCTTGGATCATGAGGGTGC AGATCGCACTTGACGCTGCAAGGGGCCTTGAATACATTCATGAACACACAAAAACTCATTATGTCCACCGTGATATCAAG ACAAGCAACATTTTACTGGATGCTTCCTTTAGAGCAAAGATTTCAGATTTTGGATTAGCAAAACTTGTTGGGAAAACAAA TGAAGGAGAAGTATCAACTACCAAAGTTGTTGGTACATATGGATATCTTGCTCCAGAATACTTGAGTAATGGCCTTGCAA CTACCAAAAGTGATGTATATGCATTTGGTGTTGTCCTTTTTGAGATTATATCAGGAAAGGAGGCCATCATTCGAACAGAA GGCACAGTGACAAAAAATCCGGAAAGACGTTCACTGGCTTCAGAACTCACCTGA
Protein sequence (LotjaGi3g1v0371400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIPLAKPQWKFLLLFLVFIHFKRTSSYPMEPMNCTDTSRVCTSFMAFKPQPKQTLAEIQSMFDVLPGDITVEGNGWDYMF IRKNCSCAAGIKKYVSNTTFTVKSNEGWVYDLVMDAYDGLVILPNTTRRARNGAVISLRLFCGCSSGLWNYLMSYVMTDG DSVESLASRFGVSMGSIESVNGIGDPDNVTVGSLYYIPMNSVPGDPYPLKNASPPAPVPTPSVDNFSGDQVDHKAHVPYG WIIGGLGVGLFLIILSVMLCVCMRSSSCFGEARSHEKDADGKISHKFHILRNPSFFCGSGRYICGKHVGQKQKDGESSNH TITIPKASTLGPDIFDMDKPVVFTYDEIFPSTDGFSDSNLLGHGTYGSVYYCLLRDQEVAIKRMTATKTKEFMAEIKVLC KVHHANLVELIGYAASHDEFFLVYEYAQKGSLRSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIK TSNILLDASFRAKISDFGLAKLVGKTNEGEVSTTKVVGTYGYLAPEYLSNGLATTKSDVYAFGVVLFEIISGKEAIIRTE GTVTKNPERRSLASELT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 10 | 10 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 11 | 21 | 11 | - | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 238 | 212 | - | – | |
| PANTHER | 33 | 574 | 542 | 4.2E-250 | – | |
| PANTHER | 33 | 574 | 542 | 4.2E-250 | – | |
| TMHMM | 135 | 157 | 23 | - | – | |
| Gene3D | 151 | 207 | 57 | 4.9E-7 | ||
| SUPERFAMILY | 153 | 199 | 47 | 3.79E-6 | – | |
| ProSiteProfiles | 153 | 197 | 45 | 12.58 | ||
| SMART | 154 | 198 | 45 | 7.1E-5 | ||
| Pfam | 159 | 192 | 34 | 2.4E-4 | ||
| TMHMM | 237 | 259 | 23 | - | – | |
| Phobius | 239 | 263 | 25 | - | – | |
| Phobius | 264 | 577 | 314 | - | – | |
| Gene3D | 331 | 426 | 96 | 9.3E-25 | – | |
| SUPERFAMILY | 334 | 556 | 223 | 8.63E-72 | ||
| SMART | 355 | 577 | 223 | 7.6E-31 | ||
| ProSiteProfiles | 355 | 577 | 223 | 38.336 | ||
| Pfam | 359 | 555 | 197 | 1.0E-46 | ||
| ProSitePatterns | 361 | 382 | 22 | - | ||
| Gene3D | 428 | 575 | 148 | 7.0E-46 | – | |
| ProSitePatterns | 474 | 486 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0371400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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