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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0384900 |
Transcript ID | LotjaGi3g1v0384900.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Serine/threonine-protein kinase; TAIR: AT4G00340.1 receptor-like protein kinase 4; Swiss-Prot: sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2; TrEMBL-Plants: tr|G7LBP9|G7LBP9_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0384900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77989773..77995243) extracted from Lotus japonicus Gifu genome v1.2.
TGCTGAGATATTTTGGTGATGAACAAAATTAAGTAAAATTCTTACTAGTGAAGGGTAATTTGGACATATGAACTTGTGGT GTCTTGGTTTGAAGATTAGAAATGAGAAAGAAAGAAAGAAACACGAGGCACAAGAGAAGCTACCTTCTTCCTTAGTCCTT GCCTCTTGTTTCAGTGGTATGTATGTAGCATCAGAGAGAGACCCAGACAGACTCAGATTCATGTCGGAACCAACAATGTC ACTCTTTCTCTTCTTCTTCTTCTTCTTCTTCACTCTCATTGCTTCTTCCTCTCAAACCAAATCCACCACATTACTCACCG GAAACACCACCATTCACAGCGACAATCAAACCTTCGAACTCGGCTTCTTCAACTTCGACAATAACCAACCTCGCTGGTAC CTCGCAATCCGCTTCACTTCCCTCCCCGCCCCCAACATCATCTGGGTCGCCAACCGCCGCAAACCCGCCACCACTCTCTC CGGCGCCACCCTCCAACTCACCGAAACCGGTCAATTGATCCTCACCCATTCACCATCACCATCACCCACTTCAACCCTCT GGCAAACCAACAACATACAGGGTCAAGGTCAGGGAGTGAAGCTCAAGCTTCTCGAAAATGGCAACCTCGTCCTCCTCTCC ACAAACGGCGCCGTTTCATGGCAGAGCTTCGATGAACCCACCGACACCTGGCTCCCCGGCATGAACCTCACCCGCTTCAA GACACTCACCTCATGGCGCACGTTAGCGGACCCATCTCCGGGGCTTTACTCTCTGCGGCTGAGGCCGCCGGACTACGGCG AGTTCGAGATGGTGTTCAACGGCAGCGTTTCGTACTGGTCCACTGGGAATTGGACTAATGGGTCCTTCCTCAACGTGCCG GAGATGACAGTGCCTTACATCTACCGGTTCAATTTCGAGGACCCGTTTTCTCCGACGGCGTCGTTTGGATTCTCCGAGAA CGCTTTGGACAATGGGCTCAGACCCCCTACCATGTTCCGTGTGGAGCCTTACGGCCAGGTCCGGCAGTACACGTGGTTTG CTCAGGCTGGGTCGTGGAACATGTTTTGGTCTAGGCCTGAAGAGGTTTGTCAGGTTCGGGGACTCTGCGGGAGCTTCGGC GTCTGCACCGGCGAGATTTCGAGGTTCTGTAAGTGTGTCGCGGGTTTTGAGCCTGTGGATGGTGATGGGTGGGGTTCCGG TGACTATTCTGGGGGCTGCCGGCGTGAGGGAACGTGTGGTGAGAATGATGGGTTTGAAGATCTGGGTGCTGTGAGGTTCG GTGGTGCTAATGTGAGTTCTTTTAAGGTGAAATCTAGAGGCTTGTGTGAGCGTGAGTGTTTAGCTTCTTGTGGTTGTGTT GGTTTGTCCTTTGATGAAAGGGGTGGTTTGTGCAAGAATTTTTATGGGTCTCTTGTGGATTTCCAAAATTCGACGACTGC TTTTGCGGGTGGTGGTGATGTGTTGTATGTTAGGGTTCCCAGAGAGGGATCTGTGAGGAAGGGGTTGAGTCATAAGGTTT TGGCTGTTGTTGTTGTCGGGGCAGTTGCGGTTTTGAGTGTGGTGGTAGTGACATTGTTGGTGATGTGGAGGAGGTTGAAG AAGAAGGGGATGGAGGAAGATGAGTTTGTTCCTATGTTGAATTTGAAGGTGTTTTCTTACAAGGAGCTTCAATTGGCTAC TCGGGGGTTTTCGGAGAAGGTTGGGCATGGCGGGTTTGGGACGGTGTTTCAAGGGGAGCTGAGTGATTCCTCTCTAGTTG CAGTGAAGCGTTTGGAGAGGCCAGGGGGCGGGGAGAAAGAGTTCAGGGCAGAGGTGTCCACTATTGGGAACATTCAGCAT GTTAATCTTGTGAGGCTCAGAGGGTTTTGCTCTGAGAATTCTCACAGGCTTTTGGTCTATGAGTACATGCATAATGGTGC CCTGAGTGCTTATCTGCGGAAAGATGGGCCATGTTTGAGCTGGGATGTTAGGTTCCAGGTAGCAATTGGAACGGCTAAAG GCATAGCTTATTTACATGAGGAATGTAGATGTTGCATCCTGCACTGTGATATCAAGCCTGAAAACATCCTTTTGGACAGT GATTTCACTGCCAAAGTTTCTGATTTTGGGTTGGCAAAGCTCATAGGCAGGGACTTCAGCAGGGTTTTGGCAACCATGAG GGGTACATGGGGATATGTAGCTCCGGAGTGGATTTCGGGTGTGGCAATCACCACCAAAGCTGATGTTTACAGCTATGGCA TGACATTGCTAGAACTAATCAGCGGTCGCCGGAATGTAGAGACACCACCATCTGCTGGTGGTGGTGAGAGTGGTAGTGAG ACTGGAGAGAAGTGGTTCTTTCCTCCGTGGGCAGCACAGCAGATAATCGAGGGTAATGTGGCTGCTGTGGTTGATAAGAA GCTTGGAAGTGTATATAGCATTGACGAGGCTGGAAGGATTGCTTTGGTGGCAGTTTGGTGCATTCAGGATGATGAGGCAA TGAGACCTACTATGAATATCGTGGTGAAAATGTTAGAGGGATTAGTGGAGGTGACCGTTCCTCCACCACCTAAGATGCTA CAAGCGTTGGTTACAGGGGAATCCTTTCATGGGGTAAAGGGTGATTCTGAGAATGAAGTATCCTCTGTTGGAAGCTTATC CGGTGGCAACTTGGAAGTGTCAACTGCTGATTCAGAATCATGTATAGGGGATGCTTCTTCCCCTCTGGATTTCAACGTCA ACGTTCGATGACACCCTTTTTAGTCCTGATTATAGCATTGTAAGTTAGTATACCTCCTTTCCCCCTTCCCACCCTTTTTT TTTCTCCCTAAGGAGAGGAATGGAGGAAAAAAAACCTAGATTTGGATGTAAATTAAGTTGCCTTTGCTGGACAACTTTTG GTTGCTTGAAATTAGGATGTTGGAACTTGAAAGGGTTGATTTCCCACCTTCTAATTTCAAATTTTCTTCTTTCAAGTGAA ATGAAATATTCACTTTCATATATCTTTGTGCATTTGATCTTTTTTAAGCTGACAGTACAGTGTAGCCATATCAAAATAAG TTTTGTCTTTGATATGATGTTATGAAATCGTGGCAACAACAATTATCATGATTCAATTTTGATCCCACCTGACTGATGAA AATGAAAGTTTTTAGCAGATAATTGAACAAGTTATGATATTATGGCAGAAGATAGTTTTCTCCAAGGTAAATTATTCTCC TCTAAACGCTCCAAGTTATATGATTGTCCAAATCTTTTTGCAGCTTTATAACTCATGGAATTTTGCAATAGCTTTAGCAT GGCTTATTGCAAGTTGGCCAATAAGTTGTAGACTATAGCAAGTTATGATATTAGAATTGATATGATATTGCAAGCTGTGG CAATAAATTGTATGCTGTTGCAGGTTATATGATATTGGAATTGATAGCACCTATGGTTCTTGAAATCAACTATGCCTGGG ACAGAATCAAGTTTCCAGTTTAACATTTTTCCATTATTAAGAAAGTAAGTGCCTTTAATTGTTTTCATATTATGTCTAAA TTATCAAATGCATGTTTTTGGTGACTGATGAGGATTAATCGGTAGACAATCTGTGACTTCGGGTTGGTGTCTGAAAATGT TCTCATCATTAGGGACTTGACTGCCCATAACCATAAGTCCATAACCACAAGTATTCAATCGTTTGTTTATCTAGTGCAAA CTGCTCTTGTAATTCAAGAACTTGGTATTTGTTTTCGAATTTTCAAGCTGTAATTACTGTTATTCCTTGATCTTCATTCG AAATAAATCTCATTTCTTATCTTCTTTTGTGAATTAATAGCTACTTCACTCACTGCTGGATCCTTGAACCTGGAGGAATC CACAGTCCACACTTGACACTTACCAGCCCTTTCTGTACCTTTGTCTTATGAAATTGCCTTTTGGACGTTTAGCACCAACA CGTTCCTAGTATGGCAGAGAATCAGTTACTGTAATTACTAGTTTTCAAACTTGGAGTACATTTGAGGTTCTCCAAGAAGA CCATTCATAACTACCAATAGGTCAAGATCTTAAAAGGCACTGTTACCCGCTTGACTTTGAAAACTTTTGTATTGGATATA TTTTTCCATGCTCTCCTAGTTACCAAGAAAGTAAGCCTTTCCCCTTTTCCTATACATACAGTAATCATGCTTACTGTGCT TTTTTGGCAGTTGGTCACCAGTCACCACATCTAAGGTTTGAAGAAGTAAAAAGAGGAGTGGAGATAAAATATGCAATTCT AACTAGATGTGAAATACTGGTTATTGCTGATTAACTGTATCTAGTTGCTGACAGCTGACCATGAAATAAAATCTTTCTAA AGTTGTTCACTAGAACTTTTAACAATTATCTTGTTCTTTGATGTTAAAGGGTGTGCTTTGACCTGCCAATGAATTAGTTT CATGGTTTTATAATTAGAGATGCATGCTCAATGGATGGCTGATGAGAAAATTTCTTTGTTTTATAACTTGTATGATGATT GTTGCTAGACATTTTTATATTTCAATTACTGGTTAATATTTTGACTTTTTCCATTTTTGTTTGCCTTGTATCATTCATAC ATTAGAACAATTTCAATAAACAAGTCATTAGCATTGTCTACTTGATGAGAAATTTTGGTTAATATACATGAGATGGTAGA TATAAACACTTCAATAAAGTAAACCACATTTCAGCAATTGCCACTTACGGATTATGTGATTCATGTCAACAAAACATTTT TGATAATTATATGTAATGAATGTGGTATATAATATATGTCACAAAAAGTGAGCGATAAAAGAATGAAGTGTTTTTGGCCT TATACCGTTGAATGATCTATGACAACTGTGATAAGTTACACATACAAAAAGAAAATAAAATATAGCAGGAATCATTCCCT TTGTAAAAAGTACATGTATGGATTGTCATATTTTATTCTGCAAAAGAATCATGAGAATATTATTCTAAGTGATCACGTGC CAACATCAAGTGTAAGTGTGTAACTAATAGTTCAAAAAAAAAACTTTAGAAGGAATGTTATAATAGTCTCTTATTGCCCG TTTTATCAAGGGATGACAATAGATCGGGTTGGGCTTTGCCTTTTCCAAACCCGAACTCTCATACCAAACTCAAATTTAAA ACTGTCAGGTTTCAAGTTTATTCAAACTCATTATAGCCTCAAACCCACATCATAACATAACTTGATGCATAAACTTTTTT GCAAAACAAACTGCAATTGTTAACAAATCAAGTTGTTAACATGATGGTATATACAAGAATAATTTTGTAATTTCATATAT ATTGTTCGGGATCGGGTGCGAGATTTACCAATGCCAAACTCAAACTCAACCATATCGGGTTTTGCCCGTAAAACAAACCG GGTTCGGGTTTTGTTGTCATCCCTAGTTTTAACTTTTAACTGTCCCTCTTCTCTGATTCATGTGGTTGATGTATTGACAA TTGTGCCGTTACGTTTTAAAAAAATAATGAG
CDS sequence (LotjaGi3g1v0384900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACTTGTGGTGTCTTGGTTTGAAGATTAGAAATGAGAAAGAAAGAAAGAAACACGAGGCACAAGAGAAGCTACCTTC TTCCTTAGTCCTTGCCTCTTGTTTCAGTGGTATGTATGTAGCATCAGAGAGAGACCCAGACAGACTCAGATTCATGTCGG AACCAACAATGTCACTCTTTCTCTTCTTCTTCTTCTTCTTCTTCACTCTCATTGCTTCTTCCTCTCAAACCAAATCCACC ACATTACTCACCGGAAACACCACCATTCACAGCGACAATCAAACCTTCGAACTCGGCTTCTTCAACTTCGACAATAACCA ACCTCGCTGGTACCTCGCAATCCGCTTCACTTCCCTCCCCGCCCCCAACATCATCTGGGTCGCCAACCGCCGCAAACCCG CCACCACTCTCTCCGGCGCCACCCTCCAACTCACCGAAACCGGTCAATTGATCCTCACCCATTCACCATCACCATCACCC ACTTCAACCCTCTGGCAAACCAACAACATACAGGGTCAAGGTCAGGGAGTGAAGCTCAAGCTTCTCGAAAATGGCAACCT CGTCCTCCTCTCCACAAACGGCGCCGTTTCATGGCAGAGCTTCGATGAACCCACCGACACCTGGCTCCCCGGCATGAACC TCACCCGCTTCAAGACACTCACCTCATGGCGCACGTTAGCGGACCCATCTCCGGGGCTTTACTCTCTGCGGCTGAGGCCG CCGGACTACGGCGAGTTCGAGATGGTGTTCAACGGCAGCGTTTCGTACTGGTCCACTGGGAATTGGACTAATGGGTCCTT CCTCAACGTGCCGGAGATGACAGTGCCTTACATCTACCGGTTCAATTTCGAGGACCCGTTTTCTCCGACGGCGTCGTTTG GATTCTCCGAGAACGCTTTGGACAATGGGCTCAGACCCCCTACCATGTTCCGTGTGGAGCCTTACGGCCAGGTCCGGCAG TACACGTGGTTTGCTCAGGCTGGGTCGTGGAACATGTTTTGGTCTAGGCCTGAAGAGGTTTGTCAGGTTCGGGGACTCTG CGGGAGCTTCGGCGTCTGCACCGGCGAGATTTCGAGGTTCTGTAAGTGTGTCGCGGGTTTTGAGCCTGTGGATGGTGATG GGTGGGGTTCCGGTGACTATTCTGGGGGCTGCCGGCGTGAGGGAACGTGTGGTGAGAATGATGGGTTTGAAGATCTGGGT GCTGTGAGGTTCGGTGGTGCTAATGTGAGTTCTTTTAAGGTGAAATCTAGAGGCTTGTGTGAGCGTGAGTGTTTAGCTTC TTGTGGTTGTGTTGGTTTGTCCTTTGATGAAAGGGGTGGTTTGTGCAAGAATTTTTATGGGTCTCTTGTGGATTTCCAAA ATTCGACGACTGCTTTTGCGGGTGGTGGTGATGTGTTGTATGTTAGGGTTCCCAGAGAGGGATCTGTGAGGAAGGGGTTG AGTCATAAGGTTTTGGCTGTTGTTGTTGTCGGGGCAGTTGCGGTTTTGAGTGTGGTGGTAGTGACATTGTTGGTGATGTG GAGGAGGTTGAAGAAGAAGGGGATGGAGGAAGATGAGTTTGTTCCTATGTTGAATTTGAAGGTGTTTTCTTACAAGGAGC TTCAATTGGCTACTCGGGGGTTTTCGGAGAAGGTTGGGCATGGCGGGTTTGGGACGGTGTTTCAAGGGGAGCTGAGTGAT TCCTCTCTAGTTGCAGTGAAGCGTTTGGAGAGGCCAGGGGGCGGGGAGAAAGAGTTCAGGGCAGAGGTGTCCACTATTGG GAACATTCAGCATGTTAATCTTGTGAGGCTCAGAGGGTTTTGCTCTGAGAATTCTCACAGGCTTTTGGTCTATGAGTACA TGCATAATGGTGCCCTGAGTGCTTATCTGCGGAAAGATGGGCCATGTTTGAGCTGGGATGTTAGGTTCCAGGTAGCAATT GGAACGGCTAAAGGCATAGCTTATTTACATGAGGAATGTAGATGTTGCATCCTGCACTGTGATATCAAGCCTGAAAACAT CCTTTTGGACAGTGATTTCACTGCCAAAGTTTCTGATTTTGGGTTGGCAAAGCTCATAGGCAGGGACTTCAGCAGGGTTT TGGCAACCATGAGGGGTACATGGGGATATGTAGCTCCGGAGTGGATTTCGGGTGTGGCAATCACCACCAAAGCTGATGTT TACAGCTATGGCATGACATTGCTAGAACTAATCAGCGGTCGCCGGAATGTAGAGACACCACCATCTGCTGGTGGTGGTGA GAGTGGTAGTGAGACTGGAGAGAAGTGGTTCTTTCCTCCGTGGGCAGCACAGCAGATAATCGAGGGTAATGTGGCTGCTG TGGTTGATAAGAAGCTTGGAAGTGTATATAGCATTGACGAGGCTGGAAGGATTGCTTTGGTGGCAGTTTGGTGCATTCAG GATGATGAGGCAATGAGACCTACTATGAATATCGTGGTGAAAATGTTAGAGGGATTAGTGGAGGTGACCGTTCCTCCACC ACCTAAGATGCTACAAGCGTTGGTTACAGGGGAATCCTTTCATGGGGTAAAGGGTGATTCTGAGAATGAAGTATCCTCTG TTGGAAGCTTATCCGGTGGCAACTTGGAAGTGTCAACTGCTGATTCAGAATCATGTATAGGGGATGCTTCTTCCCCTCTG GATTTCAACGTCAACGTTCGATGA
Protein sequence (LotjaGi3g1v0384900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLWCLGLKIRNEKERKKHEAQEKLPSSLVLASCFSGMYVASERDPDRLRFMSEPTMSLFLFFFFFFFTLIASSSQTKST TLLTGNTTIHSDNQTFELGFFNFDNNQPRWYLAIRFTSLPAPNIIWVANRRKPATTLSGATLQLTETGQLILTHSPSPSP TSTLWQTNNIQGQGQGVKLKLLENGNLVLLSTNGAVSWQSFDEPTDTWLPGMNLTRFKTLTSWRTLADPSPGLYSLRLRP PDYGEFEMVFNGSVSYWSTGNWTNGSFLNVPEMTVPYIYRFNFEDPFSPTASFGFSENALDNGLRPPTMFRVEPYGQVRQ YTWFAQAGSWNMFWSRPEEVCQVRGLCGSFGVCTGEISRFCKCVAGFEPVDGDGWGSGDYSGGCRREGTCGENDGFEDLG AVRFGGANVSSFKVKSRGLCERECLASCGCVGLSFDERGGLCKNFYGSLVDFQNSTTAFAGGGDVLYVRVPREGSVRKGL SHKVLAVVVVGAVAVLSVVVVTLLVMWRRLKKKGMEEDEFVPMLNLKVFSYKELQLATRGFSEKVGHGGFGTVFQGELSD SSLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMHNGALSAYLRKDGPCLSWDVRFQVAI GTAKGIAYLHEECRCCILHCDIKPENILLDSDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADV YSYGMTLLELISGRRNVETPPSAGGGESGSETGEKWFFPPWAAQQIIEGNVAAVVDKKLGSVYSIDEAGRIALVAVWCIQ DDEAMRPTMNIVVKMLEGLVEVTVPPPPKMLQALVTGESFHGVKGDSENEVSSVGSLSGGNLEVSTADSESCIGDASSPL DFNVNVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 24 | 24 | - | – | |
Phobius | 25 | 42 | 18 | - | – | |
TMHMM | 25 | 42 | 18 | - | – | |
Phobius | 43 | 53 | 11 | - | – | |
PIRSF | 50 | 870 | 821 | 1.3E-233 | ||
Phobius | 54 | 72 | 19 | - | – | |
TMHMM | 57 | 74 | 18 | - | – | |
Phobius | 73 | 483 | 411 | - | – | |
ProSiteProfiles | 73 | 202 | 130 | 15.164 | ||
Gene3D | 77 | 202 | 126 | 1.8E-11 | ||
SMART | 80 | 204 | 125 | 7.0E-27 | ||
CDD | 82 | 204 | 123 | 2.56014E-24 | ||
SUPERFAMILY | 109 | 262 | 154 | 4.45E-23 | ||
Pfam | 124 | 218 | 95 | 2.1E-22 | ||
Pfam | 257 | 369 | 113 | 5.4E-20 | ||
PANTHER | 388 | 837 | 450 | 2.3E-145 | – | |
PANTHER | 388 | 837 | 450 | 2.3E-145 | – | |
CDD | 389 | 471 | 83 | 4.26246E-10 | – | |
ProSiteProfiles | 390 | 471 | 82 | 8.216 | ||
Phobius | 484 | 507 | 24 | - | – | |
TMHMM | 485 | 507 | 23 | - | – | |
Gene3D | 504 | 613 | 110 | 3.3E-31 | – | |
Phobius | 508 | 887 | 380 | - | – | |
SUPERFAMILY | 521 | 817 | 297 | 1.62E-73 | ||
ProSiteProfiles | 539 | 820 | 282 | 36.018 | ||
SMART | 539 | 820 | 282 | 2.3E-24 | ||
Pfam | 542 | 738 | 197 | 3.4E-46 | ||
ProSitePatterns | 545 | 567 | 23 | - | ||
CDD | 545 | 819 | 275 | 7.85295E-85 | – | |
Gene3D | 614 | 824 | 211 | 1.5E-54 | – | |
ProSitePatterns | 657 | 669 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
Biological process | Recognition of pollen | The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species. |
Expression pattern of LotjaGi3g1v0384900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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