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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0384900 |
| Transcript ID | LotjaGi3g1v0384900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase; TAIR: AT4G00340.1 receptor-like protein kinase 4; Swiss-Prot: sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2; TrEMBL-Plants: tr|G7LBP9|G7LBP9_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0384900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77990448..77995247) extracted from Lotus japonicus Gifu genome v1.2.
CAAATGCTGAGATATTTTGGTGATGAACAAAATTAAGTAAAATTCTTACTAGTGAAGGGTAATTTGGACATATGAACTTG TGGTGTCTTGGTTTGAAGATTAGAAATGAGAAAGAAAGAAAGAAACACGAGGCACAAGAGAAGCTACCTTCTTCCTTAGT CCTTGCCTCTTGTTTCAGTGGTATGTATGTAGCATCAGAGAGAGACCCAGACAGACTCAGATTCATGTCGGAACCAACAA TGTCACTCTTTCTCTTCTTCTTCTTCTTCTTCTTCACTCTCATTGCTTCTTCCTCTCAAACCAAATCCACCACATTACTC ACCGGAAACACCACCATTCACAGCGACAATCAAACCTTCGAACTCGGCTTCTTCAACTTCGACAATAACCAACCTCGCTG GTACCTCGCAATCCGCTTCACTTCCCTCCCCGCCCCCAACATCATCTGGGTCGCCAACCGCCGCAAACCCGCCACCACTC TCTCCGGCGCCACCCTCCAACTCACCGAAACCGGTCAATTGATCCTCACCCATTCACCATCACCATCACCCACTTCAACC CTCTGGCAAACCAACAACATACAGGGTCAAGGTCAGGGAGTGAAGCTCAAGCTTCTCGAAAATGGCAACCTCGTCCTCCT CTCCACAAACGGCGCCGTTTCATGGCAGAGCTTCGATGAACCCACCGACACCTGGCTCCCCGGCATGAACCTCACCCGCT TCAAGACACTCACCTCATGGCGCACGTTAGCGGACCCATCTCCGGGGCTTTACTCTCTGCGGCTGAGGCCGCCGGACTAC GGCGAGTTCGAGATGGTGTTCAACGGCAGCGTTTCGTACTGGTCCACTGGGAATTGGACTAATGGGTCCTTCCTCAACGT GCCGGAGATGACAGTGCCTTACATCTACCGGTTCAATTTCGAGGACCCGTTTTCTCCGACGGCGTCGTTTGGATTCTCCG AGAACGCTTTGGACAATGGGCTCAGACCCCCTACCATGTTCCGTGTGGAGCCTTACGGCCAGGTCCGGCAGTACACGTGG TTTGCTCAGGCTGGGTCGTGGAACATGTTTTGGTCTAGGCCTGAAGAGGTTTGTCAGGTTCGGGGACTCTGCGGGAGCTT CGGCGTCTGCACCGGCGAGATTTCGAGGTTCTGTAAGTGTGTCGCGGGTTTTGAGCCTGTGGATGGTGATGGGTGGGGTT CCGGTGACTATTCTGGGGGCTGCCGGCGTGAGGGAACGTGTGGTGAGAATGATGGGTTTGAAGATCTGGGTGCTGTGAGG TTCGGTGGTGCTAATGTGAGTTCTTTTAAGGTGAAATCTAGAGGCTTGTGTGAGCGTGAGTGTTTAGCTTCTTGTGGTTG TGTTGGTTTGTCCTTTGATGAAAGGGGTGGTTTGTGCAAGAATTTTTATGGGTCTCTTGTGGATTTCCAAAATTCGACGA CTGCTTTTGCGGGTGGTGGTGATGTGTTGTATGTTAGGGTTCCCAGAGAGGGATCTGTGAGGAAGGGGTTGAGTCATAAG GTTTTGGCTGTTGTTGTTGTCGGGGCAGTTGCGGTTTTGAGTGTGGTGGTAGTGACATTGTTGGTGATGTGGAGGAGGTT GAAGAAGAAGGGGATGGAGGAAGATGAGTTTGTTCCTATGTTGAATTTGAAGGTGTTTTCTTACAAGGAGCTTCAATTGG CTACTCGGGGGTTTTCGGAGAAGGTTGGGCATGGCGGGTTTGGGACGGTGTTTCAAGGGGAGCTGAGTGATTCCTCTCTA GTTGCAGTGAAGCGTTTGGAGAGGCCAGGGGGCGGGGAGAAAGAGTTCAGGGCAGAGGTGTCCACTATTGGGAACATTCA GCATGTTAATCTTGTGAGGCTCAGAGGGTTTTGCTCTGAGAATTCTCACAGGCTTTTGGTCTATGAGTACATGCATAATG GTGCCCTGAGTGCTTATCTGCGGAAAGATGGGCCATGTTTGAGCTGGGATGTTAGGTTCCAGGTAGCAATTGGAACGGCT AAAGGCATAGCTTATTTACATGAGGAATGTAGATGTTGCATCCTGCACTGTGATATCAAGCCTGAAAACATCCTTTTGGA CAGTGATTTCACTGCCAAAGTTTCTGATTTTGGGTTGGCAAAGCTCATAGGCAGGGACTTCAGCAGGGTTTTGGCAACCA TGAGGGGTACATGGGGATATGTAGCTCCGGAGTGGATTTCGGGTGTGGCAATCACCACCAAAGCTGATGTTTACAGCTAT GGCATGACATTGCTAGAACTAATCAGCGGTCGCCGGAATGTAGAGACACCACCATCTGCTGGTGGTGGTGAGAGTGGTAG TGAGACTGGAGAGAAGTGGTTCTTTCCTCCGTGGGCAGCACAGCAGATAATCGAGGGTAATGTGGCTGCTGTGGTTGATA AGAAGCTTGGAAGTGTATATAGCATTGACGAGGCTGGAAGGATTGCTTTGGTGGCAGTTTGGTGCATTCAGGATGATGAG GCAATGAGACCTACTATGAATATCGTGGTGAAAATGTTAGAGGGATTAGTGGAGGTGACCGTTCCTCCACCACCTAAGAT GCTACAAGCGTTGGTTACAGGGGAATCCTTTCATGGGGTAAAGGGTGATTCTGAGAATGAAGTATCCTCTGTTGGAAGCT TATCCGGTGGCAACTTGGAAGTGTCAACTGCTGATTCAGAATCATGTATAGGGGATGCTTCTTCCCCTCTGGATTTCAAC GTCAACGTTCGATGACACCCTTTTTAGTCCTGATTATAGCATTGTAAGTTAGTATACCTCCTTTCCCCCTTCCCACCCTT TTTTTTTCTCCCTAAGGAGAGGAATGGAGGAAAAAAAACCTAGATTTGGATGTAAATTAAGTTGCCTTTGCTGGACAACT TTTGGTTGCTTGAAATTAGGATGTTGGAACTTGAAAGGGTTGATTTCCCACCTTCTAATTTCAAATTTTCTTCTTTCAAG TGAAATGAAATATTCACTTTCATATATCTTTGTGCATTTGATCTTTTTTAAGCTGACAGTACAGTGTAGCCATATCAAAA TAAGTTTTGTCTTTGATATGATGTTATGAAATCGTGGCAACAACAATTATCATGATTCAATTTTGATCCCACCTGACTGA TGAAAATGAAAGTTTTTAGCAGATAATTGAACAAGTTATGATATTATGGCAGAAGATAGTTTTCTCCAAGGTAAATTATT CTCCTCTAAACGCTCCAAGTTATATGATTGTCCAAATCTTTTTGCAGCTTTATAACTCATGGAATTTTGCAATAGCTTTA GCATGGCTTATTGCAAGTTGGCCAATAAGTTGTAGACTATAGCAAGTTATGATATTAGAATTGATATGATATTGCAAGCT GTGGCAATAAATTGTATGCTGTTGCAGGTTATATGATATTGGAATTGATAGCACCTATGGTTCTTGAAATCAACTATGCC TGGGACAGAATCAAGTTTCCAGTTTAACATTTTTCCATTATTAAGAAAGTAAGTGCCTTTAATTGTTTTCATATTATGTC TAAATTATCAAATGCATGTTTTTGGTGACTGATGAGGATTAATCGGTAGACAATCTGTGACTTCGGGTTGGTGTCTGAAA ATGTTCTCATCATTAGGGACTTGACTGCCCATAACCATAAGTCCATAACCACAAGTATTCAATCGTTTGTTTATCTAGTG CAAACTGCTCTTGTAATTCAAGAACTTGGTATTTGTTTTCGAATTTTCAAGCTGTAATTACTGTTATTCCTTGATCTTCA TTCGAAATAAATCTCATTTCTTATCTTCTTTTGTGAATTAATAGCTACTTCACTCACTGCTGGATCCTTGAACCTGGAGG AATCCACAGTCCACACTTGACACTTACCAGCCCTTTCTGTACCTTTGTCTTATGAAATTGCCTTTTGGACGTTTAGCACC AACACGTTCCTAGTATGGCAGAGAATCAGTTACTGTAATTACTAGTTTTCAAACTTGGAGTACATTTGAGGTTCTCCAAG AAGACCATTCATAACTACCAATAGGTCAAGATCTTAAAAGGCACTGTTACCCGCTTGACTTTGAAAACTTTTGTATTGGA TATATTTTTCCATGCTCTCCTAGTTACCAAGAAAGTAAGCCTTTCCCCTTTTCCTATACATACAGTAATCATGCTTACTG TGCTTTTTTGGCAGTTGGTCACCAGTCACCACATCTAAGGTTTGAAGAAGTAAAAAGAGGAGTGGAGATAAAATATGCAA TTCTAACTAGATGTGAAATACTGGTTATTGCTGATTAACTGTATCTAGTTGCTGACAGCTGACCATGAAATAAAATCTTT CTAAAGTTGTTCACTAGAACTTTTAACAATTATCTTGTTCTTTGATGTTAAAGGGTGTGCTTTGACCTGCCAATGAATTA GTTTCATGGTTTTATAATTAGAGATGCATGCTCAATGGATGGCTGATGAGAAAATTTCTTTGTTTTATAACTTGTATGAT GATTGTTGCTAGACATTTTTATATTTCAATTACTGGTTAATATTTTGACTTTTTCCATTTTTGTTTGCCTTGTATCATTC ATACATTAGAACAATTTCAATAAACAAGTCATTAGCATTGTCTACTTGATGAGAAATTTTGGTTAATATACATGAGATGG TAGATATAAACACTTCAATAAAGTAAACCACATTTCAGCAATTGCCACTTACGGATTATGTGATTCATGTCAACAAAACA TTTTTGATAATTATATGTAATGAATGTGGTATATAATATATGTCACAAAAAGTGAGCGATAAAAGAATGAAGTGTTTTTG
CDS sequence (LotjaGi3g1v0384900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACTTGTGGTGTCTTGGTTTGAAGATTAGAAATGAGAAAGAAAGAAAGAAACACGAGGCACAAGAGAAGCTACCTTC TTCCTTAGTCCTTGCCTCTTGTTTCAGTGGTATGTATGTAGCATCAGAGAGAGACCCAGACAGACTCAGATTCATGTCGG AACCAACAATGTCACTCTTTCTCTTCTTCTTCTTCTTCTTCTTCACTCTCATTGCTTCTTCCTCTCAAACCAAATCCACC ACATTACTCACCGGAAACACCACCATTCACAGCGACAATCAAACCTTCGAACTCGGCTTCTTCAACTTCGACAATAACCA ACCTCGCTGGTACCTCGCAATCCGCTTCACTTCCCTCCCCGCCCCCAACATCATCTGGGTCGCCAACCGCCGCAAACCCG CCACCACTCTCTCCGGCGCCACCCTCCAACTCACCGAAACCGGTCAATTGATCCTCACCCATTCACCATCACCATCACCC ACTTCAACCCTCTGGCAAACCAACAACATACAGGGTCAAGGTCAGGGAGTGAAGCTCAAGCTTCTCGAAAATGGCAACCT CGTCCTCCTCTCCACAAACGGCGCCGTTTCATGGCAGAGCTTCGATGAACCCACCGACACCTGGCTCCCCGGCATGAACC TCACCCGCTTCAAGACACTCACCTCATGGCGCACGTTAGCGGACCCATCTCCGGGGCTTTACTCTCTGCGGCTGAGGCCG CCGGACTACGGCGAGTTCGAGATGGTGTTCAACGGCAGCGTTTCGTACTGGTCCACTGGGAATTGGACTAATGGGTCCTT CCTCAACGTGCCGGAGATGACAGTGCCTTACATCTACCGGTTCAATTTCGAGGACCCGTTTTCTCCGACGGCGTCGTTTG GATTCTCCGAGAACGCTTTGGACAATGGGCTCAGACCCCCTACCATGTTCCGTGTGGAGCCTTACGGCCAGGTCCGGCAG TACACGTGGTTTGCTCAGGCTGGGTCGTGGAACATGTTTTGGTCTAGGCCTGAAGAGGTTTGTCAGGTTCGGGGACTCTG CGGGAGCTTCGGCGTCTGCACCGGCGAGATTTCGAGGTTCTGTAAGTGTGTCGCGGGTTTTGAGCCTGTGGATGGTGATG GGTGGGGTTCCGGTGACTATTCTGGGGGCTGCCGGCGTGAGGGAACGTGTGGTGAGAATGATGGGTTTGAAGATCTGGGT GCTGTGAGGTTCGGTGGTGCTAATGTGAGTTCTTTTAAGGTGAAATCTAGAGGCTTGTGTGAGCGTGAGTGTTTAGCTTC TTGTGGTTGTGTTGGTTTGTCCTTTGATGAAAGGGGTGGTTTGTGCAAGAATTTTTATGGGTCTCTTGTGGATTTCCAAA ATTCGACGACTGCTTTTGCGGGTGGTGGTGATGTGTTGTATGTTAGGGTTCCCAGAGAGGGATCTGTGAGGAAGGGGTTG AGTCATAAGGTTTTGGCTGTTGTTGTTGTCGGGGCAGTTGCGGTTTTGAGTGTGGTGGTAGTGACATTGTTGGTGATGTG GAGGAGGTTGAAGAAGAAGGGGATGGAGGAAGATGAGTTTGTTCCTATGTTGAATTTGAAGGTGTTTTCTTACAAGGAGC TTCAATTGGCTACTCGGGGGTTTTCGGAGAAGGTTGGGCATGGCGGGTTTGGGACGGTGTTTCAAGGGGAGCTGAGTGAT TCCTCTCTAGTTGCAGTGAAGCGTTTGGAGAGGCCAGGGGGCGGGGAGAAAGAGTTCAGGGCAGAGGTGTCCACTATTGG GAACATTCAGCATGTTAATCTTGTGAGGCTCAGAGGGTTTTGCTCTGAGAATTCTCACAGGCTTTTGGTCTATGAGTACA TGCATAATGGTGCCCTGAGTGCTTATCTGCGGAAAGATGGGCCATGTTTGAGCTGGGATGTTAGGTTCCAGGTAGCAATT GGAACGGCTAAAGGCATAGCTTATTTACATGAGGAATGTAGATGTTGCATCCTGCACTGTGATATCAAGCCTGAAAACAT CCTTTTGGACAGTGATTTCACTGCCAAAGTTTCTGATTTTGGGTTGGCAAAGCTCATAGGCAGGGACTTCAGCAGGGTTT TGGCAACCATGAGGGGTACATGGGGATATGTAGCTCCGGAGTGGATTTCGGGTGTGGCAATCACCACCAAAGCTGATGTT TACAGCTATGGCATGACATTGCTAGAACTAATCAGCGGTCGCCGGAATGTAGAGACACCACCATCTGCTGGTGGTGGTGA GAGTGGTAGTGAGACTGGAGAGAAGTGGTTCTTTCCTCCGTGGGCAGCACAGCAGATAATCGAGGGTAATGTGGCTGCTG TGGTTGATAAGAAGCTTGGAAGTGTATATAGCATTGACGAGGCTGGAAGGATTGCTTTGGTGGCAGTTTGGTGCATTCAG GATGATGAGGCAATGAGACCTACTATGAATATCGTGGTGAAAATGTTAGAGGGATTAGTGGAGGTGACCGTTCCTCCACC ACCTAAGATGCTACAAGCGTTGGTTACAGGGGAATCCTTTCATGGGGTAAAGGGTGATTCTGAGAATGAAGTATCCTCTG TTGGAAGCTTATCCGGTGGCAACTTGGAAGTGTCAACTGCTGATTCAGAATCATGTATAGGGGATGCTTCTTCCCCTCTG GATTTCAACGTCAACGTTCGATGA
Protein sequence (LotjaGi3g1v0384900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLWCLGLKIRNEKERKKHEAQEKLPSSLVLASCFSGMYVASERDPDRLRFMSEPTMSLFLFFFFFFFTLIASSSQTKST TLLTGNTTIHSDNQTFELGFFNFDNNQPRWYLAIRFTSLPAPNIIWVANRRKPATTLSGATLQLTETGQLILTHSPSPSP TSTLWQTNNIQGQGQGVKLKLLENGNLVLLSTNGAVSWQSFDEPTDTWLPGMNLTRFKTLTSWRTLADPSPGLYSLRLRP PDYGEFEMVFNGSVSYWSTGNWTNGSFLNVPEMTVPYIYRFNFEDPFSPTASFGFSENALDNGLRPPTMFRVEPYGQVRQ YTWFAQAGSWNMFWSRPEEVCQVRGLCGSFGVCTGEISRFCKCVAGFEPVDGDGWGSGDYSGGCRREGTCGENDGFEDLG AVRFGGANVSSFKVKSRGLCERECLASCGCVGLSFDERGGLCKNFYGSLVDFQNSTTAFAGGGDVLYVRVPREGSVRKGL SHKVLAVVVVGAVAVLSVVVVTLLVMWRRLKKKGMEEDEFVPMLNLKVFSYKELQLATRGFSEKVGHGGFGTVFQGELSD SSLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMHNGALSAYLRKDGPCLSWDVRFQVAI GTAKGIAYLHEECRCCILHCDIKPENILLDSDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADV YSYGMTLLELISGRRNVETPPSAGGGESGSETGEKWFFPPWAAQQIIEGNVAAVVDKKLGSVYSIDEAGRIALVAVWCIQ DDEAMRPTMNIVVKMLEGLVEVTVPPPPKMLQALVTGESFHGVKGDSENEVSSVGSLSGGNLEVSTADSESCIGDASSPL DFNVNVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 25 | 42 | 18 | - | – | |
| TMHMM | 25 | 42 | 18 | - | – | |
| Phobius | 43 | 53 | 11 | - | – | |
| PIRSF | 50 | 870 | 821 | 1.3E-233 | ||
| Phobius | 54 | 72 | 19 | - | – | |
| TMHMM | 57 | 74 | 18 | - | – | |
| Phobius | 73 | 483 | 411 | - | – | |
| ProSiteProfiles | 73 | 202 | 130 | 15.164 | ||
| Gene3D | 77 | 202 | 126 | 1.8E-11 | ||
| SMART | 80 | 204 | 125 | 7.0E-27 | ||
| CDD | 82 | 204 | 123 | 2.56014E-24 | ||
| SUPERFAMILY | 109 | 262 | 154 | 4.45E-23 | ||
| Pfam | 124 | 218 | 95 | 2.1E-22 | ||
| Pfam | 257 | 369 | 113 | 5.4E-20 | ||
| PANTHER | 388 | 837 | 450 | 2.3E-145 | – | |
| PANTHER | 388 | 837 | 450 | 2.3E-145 | – | |
| CDD | 389 | 471 | 83 | 4.26246E-10 | – | |
| ProSiteProfiles | 390 | 471 | 82 | 8.216 | ||
| Phobius | 484 | 507 | 24 | - | – | |
| TMHMM | 485 | 507 | 23 | - | – | |
| Gene3D | 504 | 613 | 110 | 3.3E-31 | – | |
| Phobius | 508 | 887 | 380 | - | – | |
| SUPERFAMILY | 521 | 817 | 297 | 1.62E-73 | ||
| ProSiteProfiles | 539 | 820 | 282 | 36.018 | ||
| SMART | 539 | 820 | 282 | 2.3E-24 | ||
| Pfam | 542 | 738 | 197 | 3.4E-46 | ||
| ProSitePatterns | 545 | 567 | 23 | - | ||
| CDD | 545 | 819 | 275 | 7.85295E-85 | – | |
| Gene3D | 614 | 824 | 211 | 1.5E-54 | – | |
| ProSitePatterns | 657 | 669 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Recognition of pollen | The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species. |
Expression pattern of LotjaGi3g1v0384900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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