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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR000433
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We have found 26 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.381s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. PREDICTED: transcriptional adapter ADA2b-like [Glycine max] gi|356557975|ref|XP_003547285.1| chr0 19969290 19974373 -
n.a. PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase HAC1-like [Cicer arietinum] gi|502089455|ref|XP_004488916.1| chr0 140011975 140025960 +
n.a. PREDICTED: histone acetyltransferase HAC12-like [Cicer arietinum] gi|502164991|ref|XP_004513363.1| chr0 165135326 165137248 +
n.a. PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Cicer arietinum] gi|502146760|ref|XP_004506595.1| chr0 185597457 185601421 -
n.a. PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Glycine max] gi|356566399|ref|XP_003551419.1| chr1 40480769 40488273 -
n.a. PREDICTED: SWI/SNF complex subunit SWI3D-like [Cicer arietinum] gi|502149174|ref|XP_004507421.1| chr3 41045149 41050634 +
n.a. JOKA2 [Nicotiana tabacum] gi|337732515|gb|AEI71779.1| chr4 22215028 22219154 -
n.a. PREDICTED: transcriptional adapter ADA2-like [Glycine max] gi|356551285|ref|XP_003544007.1| chr6 2162701 2173237 +
n.a. PREDICTED: transcriptional adapter ADA2b-like [Glycine max] gi|356557975|ref|XP_003547285.1| chr6 19570843 19575861 -
n.a. Auxin transport protein BIG; TAIR: AT3G02260.2 auxin transport protein (BIG); Swiss-Prot: sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr|G7KRX3|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700 LjG1.1_chr1 104341659 104364313 +
n.a. Auxin transport protein BIG; TAIR: AT3G02260.4 auxin transport protein (BIG); Swiss-Prot: sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr|G7KRX3|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700 LjG1.1_chr1 104343604 104363223 +
n.a. E3 ubiquitin-protein ligase; TAIR: AT3G24800.1 proteolysis 1; Swiss-Prot: sp|Q8LBL5|PRT1_ARATH E3 ubiquitin-protein ligase PRT1; TrEMBL-Plants: tr|I1KZ98|I1KZ98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0586200 LjG1.1_chr1 112604029 112612064 +
n.a. E3 ubiquitin-protein ligase; TAIR: AT3G24800.1 proteolysis 1; Swiss-Prot: sp|Q8LBL5|PRT1_ARATH E3 ubiquitin-protein ligase PRT1; TrEMBL-Plants: tr|A0A151SEQ5|A0A151SEQ5_CAJCA E3 ubiquitin-protein ligase PRT1; Found in the gene: LotjaGi3g1v0081200 LjG1.1_chr3 9070869 9084672 +
n.a. Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71042862 71056878 +
n.a. Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71043049 71057558 +
n.a. Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71043055 71056890 +
n.a. Histone acetyltransferase; TAIR: AT1G16710.4 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1; TrEMBL-Plants: tr|K7KYS1|K7KYS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71043838 71056349 +
n.a. Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71043838 71056349 +
n.a. SWI/SNF complex subunit SWI3D; TAIR: AT4G34430.3 DNA-binding family protein; Swiss-Prot: sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D; TrEMBL-Plants: tr|G7JG42|G7JG42_MEDTR SWI/SNF complex subunit SWI3D; Found in the gene: LotjaGi3g1v0507400 LjG1.1_chr3 92450979 92458729 +
n.a. Ubiquitin-associated protein; TAIR: AT4G24690.1 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein; Swiss-Prot: sp|Q9SB64|NBR1_ARATH Protein NBR1 homolog; TrEMBL-Plants: tr|A0A0S3R6E3|A0A0S3R6E3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0228400 LjG1.1_chr4 53818113 53822480 -
n.a. Histone acetyltransferase; TAIR: AT1G79000.2 histone acetyltransferase of the CBP family 1; Swiss-Prot: sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1; TrEMBL-Plants: tr|G7J5R6|G7J5R6_MEDTR Histone acetylation protein; Found in the gene: LotjaGi5g1v0202100 LjG1.1_chr5 50210083 50231146 -
n.a. Histone acetyltransferase; TAIR: AT1G16710.1 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|G7JBQ0|G7JBQ0_MEDTR Histone acetylation protein; Found in the gene: LotjaGi5g1v0202300_LC LjG1.1_chr5 50253468 50255964 -
n.a. Transcriptional adapter ADA2; TAIR: AT3G07740.1 ADA2 2A; Swiss-Prot: sp|Q9SFD5|TAD2A_ARATH Transcriptional adapter ADA2a; TrEMBL-Plants: tr|A0A0R0GGU1|A0A0R0GGU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0024000 LjG1.1_chr6 4418956 4430146 +
n.a. Transcriptional adapter ADA2; TAIR: AT3G07740.1 ADA2 2A; Swiss-Prot: sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2; TrEMBL-Plants: tr|A0A0R0GGU1|A0A0R0GGU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0024000 LjG1.1_chr6 4418985 4429905 +
n.a. Transcriptional adapter ADA2; TAIR: AT4G16420.3 ADA2 2B; Swiss-Prot: sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2; TrEMBL-Plants: tr|I1MFQ5|I1MFQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0284200 LjG1.1_chr6 60055316 60060639 -
n.a. Transcriptional adapter ADA2; TAIR: AT4G16420.3 ADA2 2B; Swiss-Prot: sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2; TrEMBL-Plants: tr|I1MFQ5|I1MFQ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0284200 LjG1.1_chr6 60055333 60060579 -