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LotjaGi4g1v0047000.1

Overview

Field Value
Gene ID LotjaGi4g1v0047000
Transcript ID LotjaGi4g1v0047000.1
Lotus japonicus genome version Gifu v1.2
Description Serine/threonine-protein kinase; TAIR: AT1G11340.1 G-type lectin S-receptor-like Serine/Threonine-kinase; Swiss-Prot: sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1; TrEMBL-Plants: tr|G7JSW6|G7JSW6_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi4g1v0047000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:5676003..5681997) extracted from Lotus japonicus Gifu genome v1.2.

GTGTGGGTCTCTCTTGCTCGTTAAGTCAAGTGACTTCTACATGTATTCCGAGTTAGGTACATGTATGGAAAAGCAGCTTT TTTTTTACAAGTTCATGCTAGTTAATCATTGACTACACATACTTCATACATAGCAACTGTTCTTCAATTTTTTATTTCCC CACTTACGTGAGATGCTAATGTTCCATCATATAAAAATATATATATGAAAGCAGCCATCCAAAGACCAGGAACACTTACG TGAGAATAAGAGTGGGTGTGTGCAAATTCTATTAGTCCTCAGCCCAGGTGAAAGTCCTGTGTGTGAGAGAGACTATTAGT ATTAGAATATTTGGATCAGCTTCTCGTTACTCAGAAGCAATTATGACACTCAGAAGCTACTCACATAAACTTTTTCACAT AATTGATTTTGGCTTTAGAATAAATTCCAAACATGGGCTGTGTATTGAAGAGCAAAACTAGTGTCATTTGAGTGTGTGAA CACACATGCCCCCATATTGTTTGCTATTTTGCCTCCATGAAAGAGGGACATGAAAGAGGAACTCCATGCACTCTGCTAAA AATCCTCTCTGCCTTGTCATGTGCCAAACTCACAAAAGTAAGTTACATAATACCAGTTTGCTTGTTAACTACTTGATTCT AATCCTCAGCTTCTCATTATGCTCTTGTTCTGACACCATATCTAATGACAAACCAATCAAAGATGGTGAGCTTCTTGTTT CTAAAGATAAAACCTTTGCTCTTGGATTCTTCAGCCCAGGCAAGTCCTCATCCCGCTACGTCGGAATCTGGTTCAACAAT TTACCTGAGAAAACAGTTGTTTGGGTTGCAAACAGAGATAATCCTATCAATGACACCACTGGGGTTCTCTCAATCAACCC AGATGGAAATCTAGTCCTCCACAACAACTTTAGCACCATTCCCATTTGGTCTACCAATGTTAATTCAGGTTCAGCTAACA GCAGCACCAATGTTATAGCTCAGCTCTCAGATATAGCAAACCTTGTCCTGATTCTGAACACCACCAAAACTATCATCTGG CAAAGCTTTGATCATCCTACAGACACCATGCTTCCATATCTAAAGGTTGGTTTTGATAGAAGAACTAACAAGAGCTTGTT CCTCCAATCATGGAAAACAGATGATGACCCTGGAAGAGGTGCTTTTACATTGAAATTCAGCACCAGTGGGAAACCTCAGT TGTTTGTTTACAGACATAACTTTCCTTGGTGGCGCGGTGGATCATGGAACGGGGAATTATTGATGGGTATACCCAACATG AAACGAGACATGGCCACTTTTAATGTGTCTTTTATAGAAGATGATAACCATGTAGAACTGTCATATAACATGTTTGATAA GTCCCTCATCACAAGGATAGTAGTTCAGCAATCAGGTTTCTTTCAAACATTCACTTGGGATAATCAAAAGAGTCAATGGA ACCGGTACTGGTCAGAACCAACAGATCAATGTGATAACTATGGAACCTGTGGATCAAACAGTAACTGTGACCCTTTGAAC TTTGAGGAGTTTCAGTGTAGTTGTCTACCTGGATTTGAGCCCAAATTCCCGCGTGAATGGTATGAGAATAGAGATGGCTC AGGAGGGTGTGTGAGGAAGCAAGGTGCAGCATCTGTTTGTGATGATGGAGAAGGGTTTGTCAAAGTTGAAGGCTTGAAGG TTCCTGATACATCTGTGGCAATTGAAAAAAAGGGTTTGAGTTTGGAAGAGTGTGAGCAGGAATGCTTGAGAAACTGCTCT TGTGAAGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGATGCTTGGCATGGCATGGGAATTTAATGGACACGCA GAAACTAAGCGATCAAGGCCAAGATTTATTCGTACGCGTTGATGCAGTAGAACTAGGTACTTAGCCCTTCTCCCACTGTT TTTCTTTCTGAATTTGACACCGCATAGATCTTATAGGATTCGTTTTAAACCTCTTTGGACTTGTTTCTTCTTATCAGCCA ATTACTACAAAAAAAGTAAAGGGGTGCTTGGTAAAAAGAGGATCATTGCAATCCTGGTAGCTTCTGTACTTGCAATTTTC CTTCTGGCCAGTGTGTATTACCTGTGGAAGATAAAAGGCAAAGGTATGTGTGATTTACTTCATATTTTCATTATTATTTG CAGTCTGTCTTGAAAAGGGTTCTAAATAGCCCTTACTATAGGTGAAAACTGCAGCAACTATGCCTAGTATGTAAGAGTAA TAGTCTATCTATCAGTTTCTCTGGATTCACATTTTCTTGTAGTATTCAACTATTATATGGACTGTGTAGTGTGTACTAAT ATCATATTTACACCATCTTAGTTCCTAGGCACATCAACATGCATAACACTAATTTATATTGAAATGTTTGTTAAAGCAAA AGAACAAGGAACGTTACCCCCATGAGGAAAACAACAAAAGTCAGAACTCCCTTTCCCTTATTTCATGTAGAAACAGTCAT TTGTAGTAACAATCAAATGAAGTCAGAATTTATTGATGTAGAAAGAGTCATTCGTATATTTTTTGACTCCAAGTGACTGC TTTTCTTTCCCTTGTTCTAATGTGTTCTCATTTTTCGAAGAAAAAAAGGTTCAAAATTGTGATTTGCTTGAAATTAATCT CATGGAATTTGTAATTTCAGATAAAGTGATGCGATACTTAAACCAAAGTTCCCCTCAAGAAGAGAACGATGTTCAGAGCA ACACACAACCAAATCTTCCCTTTTTCAGCTTTAAAATGATAATGGCAGCCACAGGAAATTTCAGCCATCAGAATAAGCTT GGGCAAGGTGGATTTGGCTCTGTCTATAAGGTAAACAGATACTCTACATTGAAAAATTGTTTTGAGATGTGAGAACATTT ATTTATCTTTCTTTCAATAGCATTGAGGAAAAAAGATGCAAAAGCAGTTAAATATACAGCTTAAGAGTTATATATATTTC AGGGCCAATTAATTAATGGACAAGAGATAGCTGTGAAAAGATTGTCCGAAAATTCAGGTCAAGGGACAGAAGAGTTTAAA AATGAAGTGACACTACTTGTTAAACTCCAACATAGAAACCTGGTGAGGTTGCTCGGTTGTTGCTGTGAAAAAGAAGAAAG GATGCTAGTTTATGAATACCTACCAAACGAAAGCTTGGACTTCTTCATTTTTGGTATGCCTTTCTCTGTTTACTAGTTGT CTCTCCAGCCTGAACAAATTTTCAGTTAGATTAGCATAAATCATAGTTGTTTTTTTTCAATCTGACATATTAGCGTAATT AATAGTAACTAAATTGAGGAGGGAAATTTTGAAAAGGCTTCTTCCCCAATTTGTTACAAAATTGAATGAGAGACATATTG AGGGGAAGAAACTTCAATATTTGATGAGTCAGATATATGCTTTGCCTTACTGTTTCCTCGCCTTTTATTGGCCATAGCAG CTACATGATCATAACAACTTCAAACAGAATGTGAAATACCATTGAAATTGAACACCAGATGTTGAAAAAGTGAGACTTTT TCACCAGTCCATTACAAAGCTTTACACAATCCATTGCATAGATCACCTGATTAAAACCTATATGAATCCCCTTCTACCTT TCTCCATCTTAGAGCTTCTAACTTAATTCCTATTACCACATATTTGAGCAATTCCTATTAAAGATTCAAAATGCAATTGA TGTTACTCATGGTGTTCAGTTTCAAGAAATTTCAACTGTCCATTTCAGGTAAAAACCAAAGGCCATTGGATTGGGATAAG TGTTTTGAAATTATTATTGGGATTGCCCGAGGTGTTCTATATCTTCACCAAGATTCAAGGCTGAAAATAATTCACAGAGA TCTAAAAGCCAGCAATGTTCTCCTTGATGGTGCAATGAATCCCAAAATCTCGGATTTTGGCATGGCTAGAATATTTGGAG AAGATCAAATTCAAGAAAGAACAAAAAGAGTGGTTGGAACATAGTATGTGTTATGTTATACACTTTCAATCACCAACATT AGAGAAATTGATCTGTATTATTACCATTTCTCTAATCATTTTGAATAATTGCAGTGGATATATGTCACCAGAATATGCAA TGGAAGGAAGATATTCAACAAAATCTGATGTCTTCAGTTATGGGGTCTTACTATTGGAGATTATTGCTGGCAAGAGGAAC ACAGATAATGATCCTGGAAGAGCCTCTCCAAACTTAATTGGATATGTAAGTTGAACAAGGAAAAACAAGAGCTAGACTTA ATAATGAGATACAAGTGAGATGCATTGTATTATCAAATTAGGAATATAGGGTAACTTGTATTACTTTCCTAATTACATAT AAAATATATTTCTTAATCTGAGTAGATATATGGTTTCTCTTATACCAAGAATCTTCTAAACTTAACATTGGCCACCAAAT TATTGGTGTATTACTCATTTAAAGATTGTGTTATGCATTTGTAGGTGTGGATGCTTTGGACAGAAGGAAGGGCCTTGGAT ATAGTTGATTCAACACTAGGCCAGTCTTATCCTCCTGATGTAGTTCTGAGGTGCATCCAAATTGGACTCTTGTGTGTGCA AGAAAATGCTGTCAACAGACCATCCATGTTAGAAGTTGTTTTCATGCTAGGAAATGAAACACCTCTTCGGGGACCCCAAA AGCCAGCATTTCTATTCAATGGCAACCGAGATTCGCAAGAGTCATCATCAGGAGGAGGATCTTCAGTAAATGAAATAACA GTAACTACAATCGATGCTCGGTAGAACTTACGTTACCTCAAGTATGTAGCCGGTACATACTTTTTCATTAAATGTGAGTT TGGTAGCACATTTGCATAGGCTCCGGCTCTGCAATTGGTTAGCATGCTTGAGAAACACGTGTATATTTATATATAAGTAC AGCATTCTCATGCATCATAGAATCAGTTTGCAGCACTGTGGTATTCTAAGGTATATATTTGAGTTTTGTGTGTGGCATGG AAGCTTTTGGATTGAAGGTTATGAGGAAATAGTGAGCCATTCTGTTATTACAGTTAGTAACTGTAATTTTGAAATGTAAA ATGAAAAAAAAAAAGAGAAAAAAATTATGTAACAGTAATAGAAACTATGATTATTTGGGTTTTGCTATTTGTGCTTACAC AAAAATATACTTAGAATAGTGTTGCTATTAATTTACAGAAAGAAGTACCAACAAGATGTTGGGAGGGACTATTCCGGTTT CCCAAACAGGTTTAATTACACTCGTCAAAGACCAAAAGAAATTTACATAAAGAAGTCAAATGCTGGTATTAGCCTTAGCC TTACTCCCTAATAACCCCTGATTTTACATTGCTATTTTAAATTGGATAATATGTAGGTTATCATAGACAACATTTTGGCA AACCTAAGTGTTGTTCAATTCACAACACACTAGAATCATACAATAGCATACAAAGCTTCGTCACACAATTCCAAGAGCCT TGGCTTTCAGCGAGCTTCAATCCTAGTCATACTCATCTCATTAACTGAGTAATTAATTCCTTCACTGGTTGAAGCATCTG AACTCGCATAATTCGATTTCTTGAAAATAAATGCTGGCTGTTTTGGAGTAGGAAGAGTTGAATCATTGTCCAACATGGAA ACAACTCTTGACATAGAAGGCCTATCTCCAGCATGATCCTGCACACATAACAGCCCAATTTGGATGCATCTTAGGACTAA ATGGTCAGAGCATGACTCTCCCAATGATGGATCAACAATCTCCAAGGCTCTTCCTTCTCTCCATAGATCCCATATCTACA TTAATTAAGTTACTTGATTAATTAGGCTATTAAAGGATATATTTAAACTAGAGTGTAGTTTCTCATATACATATTGATAC TCACATGTCCAACTAAATTTGTGGTTGTAATATCTTCATATTGACCACTGTTCTTTCTTCCTGTAACAATCTCTAGAAGT AAGACTCCAAAGCTGTATACATCTGACTTGATTGAAAATTGTCCTTCCATGGCATATTCTGGTGACATGTAGCCA 

CDS sequence (LotjaGi4g1v0047000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCACTCTGCTAAAAATCCTCTCTGCCTTGTCATGTGCCAAACTCACAAAAGTAAGTTACATAATACCAGTTTGCTTGT TAACTACTTGATTCTAATCCTCAGCTTCTCATTATGCTCTTGTTCTGACACCATATCTAATGACAAACCAATCAAAGATG GTGAGCTTCTTGTTTCTAAAGATAAAACCTTTGCTCTTGGATTCTTCAGCCCAGGCAAGTCCTCATCCCGCTACGTCGGA ATCTGGTTCAACAATTTACCTGAGAAAACAGTTGTTTGGGTTGCAAACAGAGATAATCCTATCAATGACACCACTGGGGT TCTCTCAATCAACCCAGATGGAAATCTAGTCCTCCACAACAACTTTAGCACCATTCCCATTTGGTCTACCAATGTTAATT CAGGTTCAGCTAACAGCAGCACCAATGTTATAGCTCAGCTCTCAGATATAGCAAACCTTGTCCTGATTCTGAACACCACC AAAACTATCATCTGGCAAAGCTTTGATCATCCTACAGACACCATGCTTCCATATCTAAAGGTTGGTTTTGATAGAAGAAC TAACAAGAGCTTGTTCCTCCAATCATGGAAAACAGATGATGACCCTGGAAGAGGTGCTTTTACATTGAAATTCAGCACCA GTGGGAAACCTCAGTTGTTTGTTTACAGACATAACTTTCCTTGGTGGCGCGGTGGATCATGGAACGGGGAATTATTGATG GGTATACCCAACATGAAACGAGACATGGCCACTTTTAATGTGTCTTTTATAGAAGATGATAACCATGTAGAACTGTCATA TAACATGTTTGATAAGTCCCTCATCACAAGGATAGTAGTTCAGCAATCAGGTTTCTTTCAAACATTCACTTGGGATAATC AAAAGAGTCAATGGAACCGGTACTGGTCAGAACCAACAGATCAATGTGATAACTATGGAACCTGTGGATCAAACAGTAAC TGTGACCCTTTGAACTTTGAGGAGTTTCAGTGTAGTTGTCTACCTGGATTTGAGCCCAAATTCCCGCGTGAATGGTATGA GAATAGAGATGGCTCAGGAGGGTGTGTGAGGAAGCAAGGTGCAGCATCTGTTTGTGATGATGGAGAAGGGTTTGTCAAAG TTGAAGGCTTGAAGGTTCCTGATACATCTGTGGCAATTGAAAAAAAGGGTTTGAGTTTGGAAGAGTGTGAGCAGGAATGC TTGAGAAACTGCTCTTGTGAAGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGATGCTTGGCATGGCATGGGAA TTTAATGGACACGCAGAAACTAAGCGATCAAGGCCAAGATTTATTCGTACGCGTTGATGCAGTAGAACTAGCCAATTACT ACAAAAAAAGTAAAGGGGTGCTTGGTAAAAAGAGGATCATTGCAATCCTGGTAGCTTCTGTACTTGCAATTTTCCTTCTG GCCAGTGTGTATTACCTGTGGAAGATAAAAGGCAAAGATAAAGTGATGCGATACTTAAACCAAAGTTCCCCTCAAGAAGA GAACGATGTTCAGAGCAACACACAACCAAATCTTCCCTTTTTCAGCTTTAAAATGATAATGGCAGCCACAGGAAATTTCA GCCATCAGAATAAGCTTGGGCAAGGTGGATTTGGCTCTGTCTATAAGGGCCAATTAATTAATGGACAAGAGATAGCTGTG AAAAGATTGTCCGAAAATTCAGGTCAAGGGACAGAAGAGTTTAAAAATGAAGTGACACTACTTGTTAAACTCCAACATAG AAACCTGGTGAGGTTGCTCGGTTGTTGCTGTGAAAAAGAAGAAAGGATGCTAGTTTATGAATACCTACCAAACGAAAGCT TGGACTTCTTCATTTTTGGTAAAAACCAAAGGCCATTGGATTGGGATAAGTGTTTTGAAATTATTATTGGGATTGCCCGA GGTGTTCTATATCTTCACCAAGATTCAAGGCTGAAAATAATTCACAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGG TGCAATGAATCCCAAAATCTCGGATTTTGGCATGGCTAGAATATTTGGAGAAGATCAAATTCAAGAAAGAACAAAAAGAG TGGTTGGAACATATGGATATATGTCACCAGAATATGCAATGGAAGGAAGATATTCAACAAAATCTGATGTCTTCAGTTAT GGGGTCTTACTATTGGAGATTATTGCTGGCAAGAGGAACACAGATAATGATCCTGGAAGAGCCTCTCCAAACTTAATTGG ATATGTGTGGATGCTTTGGACAGAAGGAAGGGCCTTGGATATAGTTGATTCAACACTAGGCCAGTCTTATCCTCCTGATG TAGTTCTGAGGTGCATCCAAATTGGACTCTTGTGTGTGCAAGAAAATGCTGTCAACAGACCATCCATGTTAGAAGTTGTT TTCATGCTAGGAAATGAAACACCTCTTCGGGGACCCCAAAAGCCAGCATTTCTATTCAATGGCAACCGAGATTCGCAAGA GTCATCATCAGGAGGAGGATCTTCAGTAAATGAAATAACAGTAACTACAATCGATGCTCGGTAG 

Protein sequence (LotjaGi4g1v0047000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MHSAKNPLCLVMCQTHKSKLHNTSLLVNYLILILSFSLCSCSDTISNDKPIKDGELLVSKDKTFALGFFSPGKSSSRYVG IWFNNLPEKTVVWVANRDNPINDTTGVLSINPDGNLVLHNNFSTIPIWSTNVNSGSANSSTNVIAQLSDIANLVLILNTT KTIIWQSFDHPTDTMLPYLKVGFDRRTNKSLFLQSWKTDDDPGRGAFTLKFSTSGKPQLFVYRHNFPWWRGGSWNGELLM GIPNMKRDMATFNVSFIEDDNHVELSYNMFDKSLITRIVVQQSGFFQTFTWDNQKSQWNRYWSEPTDQCDNYGTCGSNSN CDPLNFEEFQCSCLPGFEPKFPREWYENRDGSGGCVRKQGAASVCDDGEGFVKVEGLKVPDTSVAIEKKGLSLEECEQEC LRNCSCEAYAVADVRNGGSGCLAWHGNLMDTQKLSDQGQDLFVRVDAVELANYYKKSKGVLGKKRIIAILVASVLAIFLL ASVYYLWKIKGKDKVMRYLNQSSPQEENDVQSNTQPNLPFFSFKMIMAATGNFSHQNKLGQGGFGSVYKGQLINGQEIAV KRLSENSGQGTEEFKNEVTLLVKLQHRNLVRLLGCCCEKEERMLVYEYLPNESLDFFIFGKNQRPLDWDKCFEIIIGIAR GVLYLHQDSRLKIIHRDLKASNVLLDGAMNPKISDFGMARIFGEDQIQERTKRVVGTYGYMSPEYAMEGRYSTKSDVFSY GVLLLEIIAGKRNTDNDPGRASPNLIGYVWMLWTEGRALDIVDSTLGQSYPPDVVLRCIQIGLLCVQENAVNRPSMLEVV FMLGNETPLRGPQKPAFLFNGNRDSQESSSGGGSSVNEITVTTIDAR 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 19 19 -
SignalP_EUK 1 41 41 -
PIRSF 16 847 832 7.7E-273
Phobius 20 38 19 -
Phobius 39 465 427 -
ProSiteProfiles 42 168 127 18.208
Gene3D 42 169 128 1.6E-15
SMART 48 171 124 1.2E-36
CDD 48 171 124 1.83379E-32
Pfam 90 197 108 9.6E-33
SUPERFAMILY 91 202 112 1.24E-23
Pfam 229 341 113 4.7E-28
ProSiteProfiles 305 343 39 9.934
Pfam 365 431 67 3.3E-21
ProSiteProfiles 365 446 82 10.934
CDD 366 445 80 3.55441E-22
SMART 366 445 80 2.3E-13
TMHMM 465 487 23 -
Phobius 466 487 22 -
Phobius 488 847 360 -
Gene3D 493 608 116 1.6E-39
PANTHER 509 813 305 5.3E-132
PANTHER 509 813 305 5.3E-132
SUPERFAMILY 514 817 304 2.16E-85
ProSiteProfiles 533 817 285 37.997
SMART 533 802 270 7.2E-34
Pfam 535 800 266 2.6E-49
ProSitePatterns 539 561 23 -
CDD 539 803 265 6.32034E-97
Gene3D 609 810 202 1.4E-59
ProSitePatterns 653 665 13 -
MobiDBLite 817 847 31 -
MobiDBLite 819 847 29 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Biological process Recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0047000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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