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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0114300 |
| Transcript ID | LotjaGi4g1v0114300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; Swiss-Prot: sp|Q0GXS4|NFP_MEDTR Serine/threonine receptor-like kinase NFP; TrEMBL-Plants: tr|D3KTZ8|D3KTZ8_LOTJA LysM type receptor kinase; Found in the gene: LotjaGi4g1v0114300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:16525759..16528920) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTCAAAAAAAGTTAAAGCTAAAGACAAAAGCTGCTGCTGATTTCTGTTAATCCAAACTACTATTTTTACCAGTAAAG CTCCATATAAACAATGATAATCATGATTGTCTCTAATAACAACTTTCCCTTTATCCTTCCCTTGTGCCTTTCACTCATTC ACTGCCTCTAGCAACAATGACTTCCTTCTTCCTTTTTACAAACACACTATTTCTTGCACTCATGATGTTTTTTTCCACCA CCCATCACATCCTTGCTCAATTGTCACATACCAATGGAACAAACTTTTCATGCCCTGTGGACTCACCTCCATCCTGTGAC ACATATGTAACATACTTTGCTCAGTCTCCAAATTTTTTGACCCTTACAAGCATATCTGATCTATTTGACACCAGCCCTCT TTCAATAGCAAGAGCAAGTAATATAAAGGATGAGAATCAGAACCTTGTTCCAGGCCAACTCTTGCTGGTACCTGTAACTT GTGCTTGCAGTGGAAGCAACTCTTTTTCCAATATCTCACACATGATCAAAGAGGGTGAAAGCTACTACTATCTTTCAACC ACTTCATATGAGAATCTCACCAATTGGGAGACAGTGCAAGATTCAAATCCTAATTACAATCCATATCTGTTGCCAGTAGG CATCAAAGTAGTGATCCCTTTGTTCTGCAAGTGCCCTTCAAATTACCACCTGAACAAAGGGATAGAGTATCTGATTACTT ATGTGTGGCATAACAATGACAATGTTTCCCTCGTAGCTTCCAAGTTTGGTGTATCAACACAGGACATAATTAGTGAAAAC AATTTCAGCCACCAGAACTTCACTGCTGCAACAAACTTTCCAATTTTAATCCCAGTGACTCAGTTACCATCTCTTTCTCA ATCTTATTCTTCAAGTGAAAGAAAGAGAAGCAATCATATTCATATTATAATTTCTATTGGTATCAGCCTGGGAAGCACTC TTCTGATTGCACTTTTGGTACTGGTTAGTGTAACTTGTCTGAGGAAGAGAAAGAGTAGTGAAAATAAGAGTTTGTTGTCT GTGGAGATTGCAGGCAAGAAGTTAATTTCTGGAGTTTCAAACTATGTAAGTAAGTCAATCTTGTATGAATTTCGTTTAAT TATGGAAGCTACTTTGAACCTCAATGAGCAGTGTAAGATTGGAGAATCAGTGTACAAGGCAAAATTGGATGGTCAAGTTT TAGCTGTGAAGAAAGTAAAGGAAGATGTGACAGAGGAGGTGATGATTCTACAGAAGGTAAATCATTTAAATCTGGTGAAA CTAATGGGTGTCTCTTCAGGACATGATGGGAATCACTTCCTTGTGTATGAATTTGCTGAAAATGGGTCTCTTCATAACTG GTTGTTCTCCAATTCTTCAACTGGTTCAAGATTCCTCACATGGAGTCAGAGGATAAGCATAGCAGTTGATGTTGCCATGG GTTTGCAATACATGCATGAACACACTCAGCCAAGTATAGTCCACAGGGACATCACATCAAGTAATATCCTTCTTGACTCC AACTTTAAGGCCAAGATAGCAAATTTTTCTGTTGCCAGAACTTCAATCAATCCCATGATATTAAAAGTAGATGTCTTTGG TTATGGAGTGGTTCTATTGGAGTTACTGTCAGGGAAGAAATCCTTAACAAACAATGAAATTAATCATATTAGGGAGATCT TTGATCTAAAAGAGAAGAGAGAGGAGAGGATTAGAAGATGGATGGATCCTAAGATAGAGAGCTTGTACCCTATTGATGAT GCTCTCAGCTTGGCCTTTTTGGCAATGAATTGCACATCAGAAAAGCCTCTGTCAAGACCAACCATGGGAGAAGTTGTTCT TAGCCTCTCCCTTCTCATGACTCAACACTCTCCTACCACATTAGAGAGATCATGGACTTGTGGGTTAGATGTAGATGTTA CAGAAATGCAAACTTTGATAGCAGCTCGTTGATTGCGGTGTCCCAATGTTCTACTTTTTTTATATTAGCTTGTCACAGTG TCCGTGTCAGAGTCGGTGTTTCATAGGTGCATGTAAATTAAGTTCTATCTTTCAAATATGGTGTTCACTTTGACTATGTG TTTTAGGCAGCTAGATTTGGCACCCCACTCATTAGAAATATCACCCCACTTTCGGAAATAAGGTTTCCGAAGTATTTTTT CACTCAAAAGTGAGATGTTACATGTATTTTGCACTACAAATCATGAATTAATTTCGGAATATAAGATTCCGAAATAATTC GGAACCCAAAAATCCGAAAATTGGGGGTGTAAAATCTAAGGGTTGGGGTGCCAAATCCAGCTCTCTGTGTTTTAGTTAAT AAATGTATATATGTGTATATGTGTATGTGCATACATCATCTTTGTGTACATAAGTTTTCCAGGTTTCATTTTTCCACTTA TTACTATCTCAGAACTAATAGTCTTATCTTATGTGCCTGTTTATATTAAGTACATACAAGTATAGGAAAGGAAGATGATG GTTAAAAACATTTTTTGCTACTGGATAACATGACCTTAACTGTTTTCATATTGTGCTTCCTTTCAATATCATTTGTAATG CCTTAGATATTTGGAAATGTTTTCTCTCGTCACGAATTTTTCACATAATCTGAGTTATTGGATCATTTCCATCTGTATAT AGTGAACGAATTTCTTTGCTTAACGACTAGAGTTTCTGCACGTTTCAGCTGATTCAGTAGCATAGTGGATAGAAACTTGC TAGGTCAAAAGAGATACTTAAAAGTACAAAGATCTCCATATTAAGCTAAAGAGCTGTTGAGAATATGAATCAATACCTAT TATTAGAGTTAATAAAATCTAGGATTCCTATTGTTATAAGTTTTAATTGTAGGAATTATGGATGTTAGTGGGCATGTTAC AAAATCATGGTAGTTTTATTTCCAATTTATTTTCCATCAAGGGAAGAATATTTATATTTTTCTTGTATTTAAAGGTTGTT AGTATCAATGAAATTGTGTGACCTTCCATTTCACTCGCCTCTATTTCCAACAATTGGTATCAAAAGCTTCTTTACTCGAG GGACCTAGTGAGGTTGAGAGTTCCACCAAAATCTCAAATACATACATAGAGAGATCAAAATGCAATAAGATAATTCAGTC TTCTCATTGCTAGTTTCTTAGGGTGAGAAATATACCTATGGG
CDS sequence (LotjaGi4g1v0114300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTCCTTCTTCCTTTTTACAAACACACTATTTCTTGCACTCATGATGTTTTTTTCCACCACCCATCACATCCTTGC TCAATTGTCACATACCAATGGAACAAACTTTTCATGCCCTGTGGACTCACCTCCATCCTGTGACACATATGTAACATACT TTGCTCAGTCTCCAAATTTTTTGACCCTTACAAGCATATCTGATCTATTTGACACCAGCCCTCTTTCAATAGCAAGAGCA AGTAATATAAAGGATGAGAATCAGAACCTTGTTCCAGGCCAACTCTTGCTGGTACCTGTAACTTGTGCTTGCAGTGGAAG CAACTCTTTTTCCAATATCTCACACATGATCAAAGAGGGTGAAAGCTACTACTATCTTTCAACCACTTCATATGAGAATC TCACCAATTGGGAGACAGTGCAAGATTCAAATCCTAATTACAATCCATATCTGTTGCCAGTAGGCATCAAAGTAGTGATC CCTTTGTTCTGCAAGTGCCCTTCAAATTACCACCTGAACAAAGGGATAGAGTATCTGATTACTTATGTGTGGCATAACAA TGACAATGTTTCCCTCGTAGCTTCCAAGTTTGGTGTATCAACACAGGACATAATTAGTGAAAACAATTTCAGCCACCAGA ACTTCACTGCTGCAACAAACTTTCCAATTTTAATCCCAGTGACTCAGTTACCATCTCTTTCTCAATCTTATTCTTCAAGT GAAAGAAAGAGAAGCAATCATATTCATATTATAATTTCTATTGGTATCAGCCTGGGAAGCACTCTTCTGATTGCACTTTT GGTACTGGTTAGTGTAACTTGTCTGAGGAAGAGAAAGAGTAGTGAAAATAAGAGTTTGTTGTCTGTGGAGATTGCAGGCA AGAAGTTAATTTCTGGAGTTTCAAACTATGTAAGTAAGTCAATCTTGTATGAATTTCGTTTAATTATGGAAGCTACTTTG AACCTCAATGAGCAGTGTAAGATTGGAGAATCAGTGTACAAGGCAAAATTGGATGGTCAAGTTTTAGCTGTGAAGAAAGT AAAGGAAGATGTGACAGAGGAGGTGATGATTCTACAGAAGGTAAATCATTTAAATCTGGTGAAACTAATGGGTGTCTCTT CAGGACATGATGGGAATCACTTCCTTGTGTATGAATTTGCTGAAAATGGGTCTCTTCATAACTGGTTGTTCTCCAATTCT TCAACTGGTTCAAGATTCCTCACATGGAGTCAGAGGATAAGCATAGCAGTTGATGTTGCCATGGGTTTGCAATACATGCA TGAACACACTCAGCCAAGTATAGTCCACAGGGACATCACATCAAGTAATATCCTTCTTGACTCCAACTTTAAGGCCAAGA TAGCAAATTTTTCTGTTGCCAGAACTTCAATCAATCCCATGATATTAAAAGTAGATGTCTTTGGTTATGGAGTGGTTCTA TTGGAGTTACTGTCAGGGAAGAAATCCTTAACAAACAATGAAATTAATCATATTAGGGAGATCTTTGATCTAAAAGAGAA GAGAGAGGAGAGGATTAGAAGATGGATGGATCCTAAGATAGAGAGCTTGTACCCTATTGATGATGCTCTCAGCTTGGCCT TTTTGGCAATGAATTGCACATCAGAAAAGCCTCTGTCAAGACCAACCATGGGAGAAGTTGTTCTTAGCCTCTCCCTTCTC ATGACTCAACACTCTCCTACCACATTAGAGAGATCATGGACTTGTGGGTTAGATGTAGATGTTACAGAAATGCAAACTTT GATAGCAGCTCGTTGA
Protein sequence (LotjaGi4g1v0114300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSFFLFTNTLFLALMMFFSTTHHILAQLSHTNGTNFSCPVDSPPSCDTYVTYFAQSPNFLTLTSISDLFDTSPLSIARA SNIKDENQNLVPGQLLLVPVTCACSGSNSFSNISHMIKEGESYYYLSTTSYENLTNWETVQDSNPNYNPYLLPVGIKVVI PLFCKCPSNYHLNKGIEYLITYVWHNNDNVSLVASKFGVSTQDIISENNFSHQNFTAATNFPILIPVTQLPSLSQSYSSS ERKRSNHIHIIISIGISLGSTLLIALLVLVSVTCLRKRKSSENKSLLSVEIAGKKLISGVSNYVSKSILYEFRLIMEATL NLNEQCKIGESVYKAKLDGQVLAVKKVKEDVTEEVMILQKVNHLNLVKLMGVSSGHDGNHFLVYEFAENGSLHNWLFSNS STGSRFLTWSQRISIAVDVAMGLQYMHEHTQPSIVHRDITSSNILLDSNFKAKIANFSVARTSINPMILKVDVFGYGVVL LELLSGKKSLTNNEINHIREIFDLKEKREERIRRWMDPKIESLYPIDDALSLAFLAMNCTSEKPLSRPTMGEVVLSLSLL MTQHSPTTLERSWTCGLDVDVTEMQTLIAAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| PANTHER | 11 | 581 | 571 | 2.7E-236 | – | |
| PANTHER | 11 | 581 | 571 | 2.7E-236 | – | |
| Phobius | 16 | 27 | 12 | - | – | |
| Phobius | 28 | 247 | 220 | - | – | |
| ProSiteProfiles | 51 | 98 | 48 | 9.819 | ||
| Gene3D | 62 | 110 | 49 | 7.1E-6 | ||
| Pfam | 62 | 99 | 38 | 0.0019 | ||
| Gene3D | 111 | 161 | 51 | 7.1E-6 | ||
| ProSiteProfiles | 113 | 160 | 48 | 7.52 | ||
| ProSiteProfiles | 180 | 225 | 46 | 7.885 | ||
| Phobius | 248 | 275 | 28 | - | – | |
| TMHMM | 250 | 272 | 23 | - | – | |
| Phobius | 276 | 591 | 316 | - | – | |
| Gene3D | 284 | 386 | 103 | 2.4E-11 | – | |
| ProSiteProfiles | 290 | 560 | 271 | 22.633 | ||
| SUPERFAMILY | 306 | 564 | 259 | 1.35E-48 | ||
| Pfam | 345 | 463 | 119 | 2.7E-23 | ||
| Gene3D | 387 | 466 | 80 | 2.0E-22 | – | |
| ProSitePatterns | 434 | 446 | 13 | - | ||
| Gene3D | 467 | 575 | 109 | 7.8E-14 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0114300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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