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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0120100 |
| Transcript ID | LotjaGi4g1v0120100.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTPase Era; TAIR: AT5G66470.1 GTP-binding protein Era-like protein; Swiss-Prot: sp|B2V2K0|ERA_CLOBA GTPase Era; TrEMBL-Plants: tr|V7CCY5|V7CCY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0120100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17346526..17352535) extracted from Lotus japonicus Gifu genome v1.2.
GCAAGTAGCAGCAGAAGCATTGGCAATGGAGACACTGGCTATGCGCGCGGCATCAGCTGCATCTGCAACCGTTCCCCAAC CTCAATTCTCATTCCAACTTCAACACTCTCTCTTCCCCGTTCATGGCTTCACACTCTTCCACCGAAACCGCACCGATTCG CCTTCACATCTTTGTTGCAGAACCAGGCACCGCCATTCCCAACCATTCGCCAACAAACAACACCACCTCGTGCTCCATGA AGAACCACAACAACAAGAAGAGGAAGAAGATGAAGAAGTAGAAGTTGAAGAAGAAGAAGCTTCGTATTCGGATGATGACA CTTCCTTCTTGTCCCTCACCGTTAAGCCTGACCGGAACATGGCCTTGCTCGACGATTACGAGACGGAGGAGCTCGATTTC GACGATGGCCCTAACCACAGAAGCGGTTAGGATTCGGTTTCCTCTGTTGTTTTGAATTTTTTGATTTTTTCTGAAATTGA TTAATATTTCATGATTGTGCCAAAATCAATTAATTTTTATTTTGTTACAGTTAATTTAGTTAAGCATGGTTTGGAGTTTG GAGAGCTTTGAGTTTGTGCTTGCTGTTGCATTTGTTAATTTTTTATGTGTTATAATGTAATGCAGGATATGTGGCTTTAC TTGGCAAGCCAAATGTTGGCAAGAGTACACTAGCAAACCAAATGGTTGGTCAAAAGTTGTCGATAGTTACCGATAAACCG CAAACGACAAGGCATCGAATTCTCTGTATATGTTCTGGAACGGATTATCAGGTTTTTAGTCTTGAGTGGTTGCTAATTCT TCTGTTTGAGTTTATCAGCATGTTTACTTGCCTCTCATTTTCCTGCATGCCCTTCCCACATGAATCATGGATTCTGCATT TCCGAAATGCATAATACTATTCAGAGTCTCTAGGATTTTTGAATTGAAGATTGGTTTTTTTCTATAATCAATGTGATCTT CATGACATTCTACTTAATGTTCTCGAAATATTAGAGGGGGTTTATTCCCATCTCATCATAGGAAATTTAATTTTCTTAAT AATATTATTAACTAGAACAAAAGACATTCAATATGTGATTTGAGTTTTCTTGGCTATTATCCTAGCCTTGAATTAATGGA TGCACACTTGCACAGCAGCATTTGTGTTATATCTTCATTTCTGTGACCTGTGAATCTCTTGCAGATGGTACTTTATGACA CGCCTGGCGTTCTACAGAAGGAAATGCACAAGTTAGACTCAATGATGATGAAAAATGTTCGCAGTGCGGCGGTTAATGCG GACTGTGTATTGGTTCTTGTTGATGCATGTAAAGCACCTGAAAAAGTATGGTTCTTGGTTTAAATAACTGTTCTATTTAT TTTCCTTTTTTGCTGAATTACTTGCTGTTCTAGATTGATGAATTGTTGGAAGAAGGCATAGGAGATCTCAAAGATAAACC TCCCGTTCTACTGATTCTGAACAAGAAGGATCTTATAAAACCTGGAGAAGTTGCAAAGAAACTTGAGGTTGGAGCTCATT AATTAAAGTTTATATTGGAATGTATTAGTTAATCCACTGATCTGGCATGATTTTTCCAGTGCCGTATGTCCTAATTATTT GATATTTCTCGCAGTGGTATGAGAAATTTACCAACGTTGATGAGGTTATACCAGTTAGTGCTAAATATGGTCATGGGGTT GCAGATGTCAAGGACTGGATACTGTCAAAGCTTCCTAATGGACCATCTTATTATCCAAAAGCAAGTCAAAGTTTTGCTGC TCTCATTCTATTGTCTATTATTGCATCATCACTGTCTCATTTCACTTTTAGAGATAAAAACAGGAACCATTAGACACTGA ACTAACCATTTCTTCTGCTATTCCATGCCTGACTATGAAAAGAATAAATGCATTTGATTTAGAGTTCAAAATTCAGAGTA AACTTCAGTGAAAACTGGCTAATTACCTTGGGTTTTATGTTGAAGTTCATTTAAATTGAACCATAAATGCATACAACAGT TACCAATACACATGTTGTTTAATTTACTTTAAGGGTACCTGTTAGTTTTTCTTGTGTATAAAGATGTGTTATGAACAATA AAGTGACAGTCATCCTTGACTGATCAAATTTGTGTAGAGATCTTACATCTTGGAAGGTCATTTTTTGAATTCATCTATCA AGGATAAACGAATTGGTTCATGTGTTTTTTCCATAATGTGAACCACCTCTATAGGCATAGAGTCGCATTGACGGTGATAT TGAGAAGGCTATTAGTAGCACACTAGTACTGGCTGGCAACTGTGCGTGACTCTCATAGTTCCTGTACTGTAAGATTTAGA AATAGAAATAATTTTAGATGATGACGAACATTATATAATGCCATGCCCTTTAATATAGGTCTAATGGCGCAAATAGTGTT GACTCTGAAGGACCAATATTTCAAATGTCGCGCCATCAATATTCCTCCAATACTAGAGTGTGTTGCAGATCCCCTCTAGC TATCACTATAGTATTCTGTTAAAACCTTTAGATATGATAAGAACATGAGTGACTTGTCATTTCTTCTGCATACATTTCTT TCATGTGCTGCACTTACCTTAATCTTGTTCTTGAATTCACAGGACATTGTCAGTGAGCATCCAGAAAGATTTTTTGTTGC TGAAATTGTTAGAGAAAAGATTTTTATGCAGTATCGAAATGAAATTCCCTACGCATGCCAGGTGATCATTGAGTTCATTA TTTTATTTATGATACAGCTACCTTCCCTTCACCCCACAAAAGGGGAAAAAAAACAATAAAGAAGAAGAAAGAGGTTTCGA ACAGGAAAAAAAGGAATTGAAGTTGTAACTAATTTCCTTTTATACAAATGCTTACAATTTTTTTTCCTATTCTTCCAGGT GAATGTTGTAAGCTATAAGGCTCGACCGAATGCGAAAGATTTCATACAAGTCGAGATTTTGGTTGAGAAAAACTCACAAA AGATGATCGTTATTGGAAGAGTATGTAATTTATATCCATTGTGAAAAACCAGAATAGATCAATCCAAAAATCAATGAACC AGTTAGATGTCTTGTTTTTAAATTAAAAAACCCAGTTGATTTTCCATGAAAAACTGGTGACGATGAATTGCTTTTGATTG GTTGTTTTTAATTTTATTAATTTTTGTATTTTTTAATTTAAAAAAAGAATTTTAGCAAAATAAAAATCAATGCTAAGTTG TAGAAGTTCACATGTGGATTATTACAATTTAAGCTTTCATTATTGATAGTTTTTAATATTAGAATGTATAATATGGTCAA TTTTTGTTAATTCTAAATTTTGCTTAGCTTAAATTCTTGGTTTTTTATTTATTTTACTCCGTGATGTATTTTATAATATT AAAAATATATTTAATTATCACCTTTTTAACCACGGTTTAACCATAGTGAAACCAAAGAATTGTGAACTAGAATTTTCATC AGTACAATAGTAGTCTGTTACTCTGATATTTAAGCAATTGCTTATCTCATAATTCAGTAAATTGTTTGTGAACTTATGGA ATTGATTTATACAAGACACAGTGAAGTGCAATACTGTGATTGGTATTTCTTTGATTCTGTCTTTTTGGCATTTGTTTTGA ATTTACTCACTTTAAACTGTATATGACAACATTTTGTATGAAAGGATTTTTTTATATGCTTGAGGTGTTGACCCTTGACA TGGCTTGCAACCAAAATTAATACCAATTTCCTAATGTTTTGTTCATATTGAATTCTTACGCATTATGTTTCCATTGGGTG AAATAATCTAATACTGCTAATATATGCTTCTGCCCCCCTCAAATGATCTGTTGCATAGTTATGCTTGAATAGTAACCCAC ATGTATGTTGTGATCAACTACTTCAGGAAGGAAAGGCTTTGAAACTGCTTGCTACAGCTTCCCGCCTTGACATAGAAGAT TTTCTACAGAAGAAAGTTTATCTTGAGGTGCATATCCACAGAATTTTATTTTGTATCTATGCTACATTTGAACCTGAACC TGCATATTTTGCTGGTTTATTTATTAATCTTGATTCTTGAGAGTCAAGTTGTAACAATCATCATGCATTTTACTTCGAGA GTTGAAAAATATTTACTCAACACTGGTGTCTGAACAGATTGAAGTGAAGGTTAGAGAAAATTGGCGACAAGACGAAGGCC TCCTTAAGGACTATGGTTATGGGGGTCAGATACGTGTTTTATGATGTGAAGAAGTAACGAATAACTCGTTGGACATCAAT CATAATATGTAAGTTTCGATCCCTTGCTACAGGTACCATAGAAACTTAAAGTGAATATATGATTTTGGCAGACAGTAACC CTGTTCCGCTCCTTGTAGGCTTATCCAATGATCCCCTATTTGGTAAATGTGAAATAAAACTAAGTTAAATAGAAAGTTTA AGACATGGAAACAATGTTCCATGTCATGTTTAGATTACCATTAATTTTGGTTGAACAGTTCAAACGAATGTGAAACATGA ATGAAAGAAAACGTAATTGTTATGGTTTGTCACTTTATTTGGAAAATAGGAATTCGAATTGACTAAATATGTCGAAAGTG TAGGGATTTAGGCAAGGTAGAATATATCAATGTCATTTGTTGTATGTATATACATAATACTAGTCATAGTACTAGACTAC TAGGGATGTATATAAAAAAAATCTGAAATAGGATTTTTTTTTCTGATAAGTACAGATAATAATGAAAATAGAAAATACCA AATCTGGACTATGGCCCCGTGGAAGAGCTTGTTTGAGCTTATCTATTAGCATAAGCGTTTATGCAAGTGTTTGGTAGAAC TTGTGTAAATAGTTTATGGCCTACCTATATGCTGTTTTAAGCTTATGAAGCTGTTCATATTAGTTTATGAATAAAAGCTT ATGCTTATTTATAACCTATTTTAATTTTATTTCACTAAGTTTCTCTAATTAGCTCACAAATAAGCGCTTATGCGATAAAC ACCTATTGCCATAAGCGCTTAATTAAACTGTTTACATAGATGCACCGTATGTCTGGTTGTGGTAAGACAAGATGAAACGG AGAAACTCTATTGAAAGACAAGCTATCCAGGAGGCTAGAGTGTATCTAGGACTGAGCCAACCTATAGAAAGATAGGTTGG GAAGGAGCCAATCAAATGAAAAAAACAGAATACATGATTCAACAGCAACTTTGCGAGGGATTAGCCTCACTGAGCTTTCT GAATTTAGATTCTTGTGCAGCACAACAGGATTATATGTCTGCTTGATCCTGCAAGACACGATACTACACAATGTGCATGC TGCTGCAGAGGGTCCTTCTCTGAAGTTCTTCAGGTTATGTTGTTGTCTGGTTTTGACATAAGACGGTGGTCGCAAAGCAA GCAGGAATGGAAGTGAAATATCAATCAACAAACCAATCCCACATTTTTGGCCTAATTGCTCTGTTTTACCATGAAATGTG AACGCATGAGCCCAATCTCAATAGTGTAAGAAAATTATGTTTGTTCTTGGTTAAATTATTTTGAAGTCTATTTTACTTTG TTTCTTGGTAAGGTAATAAAAGTAACCTTTTTTAGTACTTAATCTTGAAGAAATTTTAGAACATTATTCTAAACAAAGTA AGTGTTGATGTAGTGATAAGATTGTCAGGAAGACTTGTGTATTGCAAGATCCTATAAAAAAATGTGTTTATTAATAGAAG AATTAATATCCACTGATATCACATTGGTTGTATGAATTCAATTTTGGATGAACCAAAATAAAATGCATTAGCCCTCACAA CATGGTACAATGTGTAACAGGATTTTTATTCGCGTTTAAGCCAATGTTGAATCACATGTAAAAGAAAACCTAAGCAAAAT CCTACAGACCCCAAAACAACGATGATTCTGACCCACGAAGAGGATACAAAAACATCCAGCATAAAAGAATTCCATAGCCA TTGCCACAAGATAGCGCAAATGGACCCTGTAACAGCTCCAACAATCACCTGGCTCACCGTGTGAAGTTTTTGCGACACCC GCAGGTATGA
CDS sequence (LotjaGi4g1v0120100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGACACTGGCTATGCGCGCGGCATCAGCTGCATCTGCAACCGTTCCCCAACCTCAATTCTCATTCCAACTTCAACA CTCTCTCTTCCCCGTTCATGGCTTCACACTCTTCCACCGAAACCGCACCGATTCGCCTTCACATCTTTGTTGCAGAACCA GGCACCGCCATTCCCAACCATTCGCCAACAAACAACACCACCTCGTGCTCCATGAAGAACCACAACAACAAGAAGAGGAA GAAGATGAAGAAGTAGAAGTTGAAGAAGAAGAAGCTTCGTATTCGGATGATGACACTTCCTTCTTGTCCCTCACCGTTAA GCCTGACCGGAACATGGCCTTGCTCGACGATTACGAGACGGAGGAGCTCGATTTCGACGATGGCCCTAACCACAGAAGCG GATATGTGGCTTTACTTGGCAAGCCAAATGTTGGCAAGAGTACACTAGCAAACCAAATGGTTGGTCAAAAGTTGTCGATA GTTACCGATAAACCGCAAACGACAAGGCATCGAATTCTCTGTATATGTTCTGGAACGGATTATCAGATGGTACTTTATGA CACGCCTGGCGTTCTACAGAAGGAAATGCACAAGTTAGACTCAATGATGATGAAAAATGTTCGCAGTGCGGCGGTTAATG CGGACTGTGTATTGGTTCTTGTTGATGCATGTAAAGCACCTGAAAAAATTGATGAATTGTTGGAAGAAGGCATAGGAGAT CTCAAAGATAAACCTCCCGTTCTACTGATTCTGAACAAGAAGGATCTTATAAAACCTGGAGAAGTTGCAAAGAAACTTGA GTGGTATGAGAAATTTACCAACGTTGATGAGGTTATACCAGTTAGTGCTAAATATGGTCATGGGGTTGCAGATGTCAAGG ACTGGATACTGTCAAAGCTTCCTAATGGACCATCTTATTATCCAAAAGACATTGTCAGTGAGCATCCAGAAAGATTTTTT GTTGCTGAAATTGTTAGAGAAAAGATTTTTATGCAGTATCGAAATGAAATTCCCTACGCATGCCAGGTGAATGTTGTAAG CTATAAGGCTCGACCGAATGCGAAAGATTTCATACAAGTCGAGATTTTGGTTGAGAAAAACTCACAAAAGATGATCGTTA TTGGAAGAGAAGGAAAGGCTTTGAAACTGCTTGCTACAGCTTCCCGCCTTGACATAGAAGATTTTCTACAGAAGAAAGTT TATCTTGAGATTGAAGTGAAGGTTAGAGAAAATTGGCGACAAGACGAAGGCCTCCTTAAGGACTATGGTTATGGGGGTCA GATACGTGTTTTATGA
Protein sequence (LotjaGi4g1v0120100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
METLAMRAASAASATVPQPQFSFQLQHSLFPVHGFTLFHRNRTDSPSHLCCRTRHRHSQPFANKQHHLVLHEEPQQQEEE EDEEVEVEEEEASYSDDDTSFLSLTVKPDRNMALLDDYETEELDFDDGPNHRSGYVALLGKPNVGKSTLANQMVGQKLSI VTDKPQTTRHRILCICSGTDYQMVLYDTPGVLQKEMHKLDSMMMKNVRSAAVNADCVLVLVDACKAPEKIDELLEEGIGD LKDKPPVLLILNKKDLIKPGEVAKKLEWYEKFTNVDEVIPVSAKYGHGVADVKDWILSKLPNGPSYYPKDIVSEHPERFF VAEIVREKIFMQYRNEIPYACQVNVVSYKARPNAKDFIQVEILVEKNSQKMIVIGREGKALKLLATASRLDIEDFLQKKV YLEIEVKVRENWRQDEGLLKDYGYGGQIRVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 34 | 34 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 8 | 16 | 9 | - | – | |
| Phobius | 17 | 34 | 18 | - | – | |
| Phobius | 35 | 431 | 397 | - | – | |
| PANTHER | 67 | 428 | 362 | 8.2E-156 | – | |
| PANTHER | 67 | 428 | 362 | 8.2E-156 | – | |
| MobiDBLite | 72 | 97 | 26 | - | – | |
| MobiDBLite | 75 | 96 | 22 | - | – | |
| Gene3D | 129 | 313 | 185 | 1.1E-42 | – | |
| CDD | 131 | 300 | 170 | 1.36614E-66 | ||
| Hamap | 131 | 424 | 294 | 31.2 | ||
| ProSiteProfiles | 132 | 302 | 171 | 46.405 | ||
| TIGRFAM | 134 | 407 | 274 | 2.2E-69 | ||
| TIGRFAM | 136 | 294 | 159 | 4.2E-20 | ||
| Pfam | 136 | 253 | 118 | 5.5E-22 | ||
| SUPERFAMILY | 136 | 334 | 199 | 8.64E-43 | ||
| SUPERFAMILY | 309 | 424 | 116 | 5.23E-36 | ||
| Gene3D | 314 | 428 | 115 | 1.2E-36 | ||
| ProSiteProfiles | 333 | 410 | 78 | 10.487 | ||
| Pfam | 336 | 413 | 78 | 1.7E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0120100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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