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Type-2 KH domain profile.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: 40S ribosomal protein S3-1-like [Cicer arietinum] gi|502131540|ref|XP_004501017.1| | 10 | ||
| – | PREDICTED: 40S ribosomal protein S3-3-like [Cicer arietinum] gi|502122563|ref|XP_004497806.1| | 18 | ||
| – | PREDICTED: GTPase Era-like [Glycine max] gi|356502167|ref|XP_003519892.1| | 23 | ||
| – | 30S ribosomal protein S3; TAIR: AT5G35530.1 Ribosomal protein S3 family protein; Swiss-Prot: sp|Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3; TrEMBL-Plants: tr|I3S6J8|I3S6J8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0556400 | 19 | ||
| – | GTPase Era; TAIR: AT1G30960.1 GTP-binding family protein; Swiss-Prot: sp|O82626|ERG_ANTMA GTP-binding protein ERG; TrEMBL-Plants: tr|G7KDM7|G7KDM7_MEDTR GTP-binding ERG-like protein; Found in the gene: LotjaGi2g1v0003800 | 26 | ||
| – | 30S ribosomal protein S3; TAIR: AT5G35530.1 Ribosomal protein S3 family protein; Swiss-Prot: sp|Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3; TrEMBL-Plants: tr|I3SJI7|I3SJI7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0314100 | 19 | ||
| – | GTPase Era; TAIR: AT5G66470.1 GTP-binding protein Era-like protein; Swiss-Prot: sp|B2V2K0|ERA_CLOBA GTPase Era; TrEMBL-Plants: tr|V7CCY5|V7CCY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0120100 | 23 | ||
| – | GTPase Era; TAIR: AT5G66470.1 GTP-binding protein Era-like protein; Swiss-Prot: sp|B2V2K0|ERA_CLOBA GTPase Era; TrEMBL-Plants: tr|V7CCY5|V7CCY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0120100 | 28 | ||
| – | GTPase Era; TAIR: AT5G66470.1 GTP-binding protein Era-like protein; Swiss-Prot: sp|B2V2K0|ERA_CLOBA GTPase Era; TrEMBL-Plants: tr|A0A0S3R4P9|A0A0S3R4P9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0120100 | 22 | ||
| – | GTPase Era; TAIR: AT5G66470.1 GTP-binding protein Era-like protein; Swiss-Prot: sp|B2V2K0|ERA_CLOBA GTPase Era; TrEMBL-Plants: tr|A0A0S3R4P9|A0A0S3R4P9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0120100 | 22 | ||
| – | GTPase Era; TAIR: AT5G66470.1 GTP-binding protein Era-like protein; Swiss-Prot: sp|B2V2K0|ERA_CLOBA GTPase Era; TrEMBL-Plants: tr|A0A0S3R4P9|A0A0S3R4P9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0120100 | 20 | ||
| – | GTPase Era; TAIR: AT5G66470.1 GTP-binding protein Era-like protein; Swiss-Prot: sp|B0TAF1|ERA_HELMI GTPase Era; TrEMBL-Plants: tr|A0A0L9TNW9|A0A0L9TNW9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0120100 | 23 | ||
| – | 30S ribosomal protein S3; TAIR: AT5G35530.1 Ribosomal protein S3 family protein; Swiss-Prot: sp|Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3; TrEMBL-Plants: tr|A0A151SP15|A0A151SP15_CAJCA 40S ribosomal protein S3-3; Found in the gene: LotjaGi6g1v0008800 | 21 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd02413 | CDD | 1 | 7.69 |