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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0172700 |
| Transcript ID | LotjaGi4g1v0172700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lectin receptor kinase; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1; TrEMBL-Plants: tr|G7LII2|G7LII2_MEDTR Lectin receptor kinase; Found in the gene: LotjaGi4g1v0172700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:34329295..34331769) extracted from Lotus japonicus Gifu genome v1.2.
AGATGAATATGTCATGATTATTAATTAAATCAATTTAATTGATAAAGCTTGGGATTCAACGTTGCATATAGTTGAGCCAG TCTTTGGGTACTCCACCATCACCATTCTCTGCTTCTCTTTCTCCTGTTCCTCACAGCCATAACTTTCTTCACCTCTGCTT CATGCTGTAACCAAACTCAAAACACCATGTTTCCAATATTCATCATCTTCACATGTTGTTCCTACGCACTCTTCAACACA GTAGACTCAATTTCCTTCAACTACACCACTTTCCAACCAAACCTTTATCTAATACATTTCGAGGGTGATGCCTTTTCCTC AAACGATGTTCTGCAGCTCACAAAGAACCAGCTCGATGGCCCGATCACAAGAAGCGTTGGTCGAGCCTCGTTCGACCAAC CTGTGAAGCTTTGGGACAGAGAAACAAATGAGCTAGCAGATTTCACCACCCATTTTTCATTTGTCATGAAATCTGTTAAT GAATCGCGATACGGTGATGGCTTATCCTTCTTCATTGCTCCATTTCAATCTTCAATCCCAAACAACTCAGCTGGTGGGTT CCTTGGTCTGTTCAGCGAGGAATCAGCATTGAACACTAGCAAGAATCAAATAGTTGCAGTTGAGTTTGACAGTTTCAAGA ATGACTGGGATCCAAGCTCGAATCATGTTGGAATTAATGTTAATTCCATCGAATCGGTTGAGAATGTGACTTGGAATAGC AGCATGAGAAACGGGAGAGTTGGTAATACTTGGATATCATATAATGCTACCTCAAAGAATCTCTCTGTGTTTCTTACTTA TGCCAACAATCCAAAGTTTAGCGGCAATTCTAGTCTTTGGCATGTTATTGATTTGAGGGAGGTTCTGCCAGAATTTGTTA GGATTGGATTCTCCGCCGCCACGGGTCAGTGGATTGAGTTACATAACATACGTTCTTGGTCATTCAATTCAAGTTTGGAT AATAATGGTGGTGGGAAAAACAACAAGGTTGAAATAGGAGTTGGAATAAGTGCTGGTTTTGGCTCTTTAACTTGTGTTAT GGGTCTGCTATGGTTCATCTTTTGGAGGAAAAGAAATGGGCCAAAAGGGGAAGATTTTGATGCTTCTATGGATGATGAAT TTGAGAGAGAAGCTGGTCCTAAAAGGTTCACCTACAAGGAACTAAGCAATGCAACAAAGGGCTTTGATGAGGCAGGAAAG CTTGGAGAAGGTGGATTTGGAGGTGTTTACAAAGGTGCTCTTGGAAAATCCAACCTCGAAGTGGCGGTGAAGAGGGTTTC AAAAGGATCAAAACAAGGGAAAAAGGAATACATATCAGAAGTAAGAGTAATCAGCAGGGTGAGACACAGAAATTTGGTTC AACTGTTAGGGTGGTGTCATGAGCAAGGAGAGCTTCTTCTTGTTTATGAATACATGCCTAATGGAAGCCTTGATTTTCAT CTATTTAAAAACAAAGTCATGCTTACTTGGACAATAAGGTACAAGGTAGCCCTGGGTTTGGCATCAGCCATTCTTTATCT TCATGAAGAGTGGGAACAGTGTGTGGTGCATAGAGATATTAAGTCAAGTAATATAATGCTCGATGCAAATTTCAATGCCA AGTTGGGTGACTTTGGTCTTGCAAGGCTGGTAGATCATGAACTTGGCTCTCAAACCACTGTTTTGGCTGGGACAATGGGG TATCTAGCTCCAGAGTGTGTCACAACTGGGAAATCAAGCAAGGAATCTGATGTTTACAGCTTTGGTGTTGTTGCACTTGA AATCACATGTGGTAGAAGACCAGTTGACTTAAAACAAGAGCCTGGTAAAGTTAGGCTTGTGGAGTGGGTTTGGGAGCTCT ATGGAAAAGGGAAGCTAGGTGAAGCAGCTGATGAGGAGTTGAATTGGGGATTTGATGGGAGGCAAATTGAATGCTTGATG ATAGTTGGCCTGTGGTGTTGTCATCCAGATCATACCATGAGGCCCTCTATTAGGCAAGTGATAAGTGTCCTCAATTTTGA AGCTCCTTTGCCTAGTCTTCCATCAAAGTTGCCTGTGCCAATGTACTATGCACCTCCCATGGAGATGTGCAAATTCTCAT ACACTACATCAGGAATCTCAAGTACAACCAATGGATCTTCCACCTACTCATCATTGTCTGCAGGGTCCAGAAAATCTCTA TTGTAGCATAGAAATGATTTTATTTTTTGATAAAAGTCTTGTATTGGACTTGTGATTTATGATTGCAAAACTTTTTTTTT TCACGACTATGTGCAAACTTTCAAATCTCTTGTCATGTACAATAGTGCCCCCATGATAAACTATCAGATTGAAACAATGT GGTATTTTGTAAACACCGAGTGAGAAAGGAGTGAAATAAAGTTGTATTTTACACACATCAAGAATACCAAGCCCCATCTA ATTTTATAAAATGATTCTTTTGACAGAGGTTTAGTAAAGATTTTAACCGATTATGCATGTGTATCAACAAATTAT
CDS sequence (LotjaGi4g1v0172700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCCAATATTCATCATCTTCACATGTTGTTCCTACGCACTCTTCAACACAGTAGACTCAATTTCCTTCAACTACAC CACTTTCCAACCAAACCTTTATCTAATACATTTCGAGGGTGATGCCTTTTCCTCAAACGATGTTCTGCAGCTCACAAAGA ACCAGCTCGATGGCCCGATCACAAGAAGCGTTGGTCGAGCCTCGTTCGACCAACCTGTGAAGCTTTGGGACAGAGAAACA AATGAGCTAGCAGATTTCACCACCCATTTTTCATTTGTCATGAAATCTGTTAATGAATCGCGATACGGTGATGGCTTATC CTTCTTCATTGCTCCATTTCAATCTTCAATCCCAAACAACTCAGCTGGTGGGTTCCTTGGTCTGTTCAGCGAGGAATCAG CATTGAACACTAGCAAGAATCAAATAGTTGCAGTTGAGTTTGACAGTTTCAAGAATGACTGGGATCCAAGCTCGAATCAT GTTGGAATTAATGTTAATTCCATCGAATCGGTTGAGAATGTGACTTGGAATAGCAGCATGAGAAACGGGAGAGTTGGTAA TACTTGGATATCATATAATGCTACCTCAAAGAATCTCTCTGTGTTTCTTACTTATGCCAACAATCCAAAGTTTAGCGGCA ATTCTAGTCTTTGGCATGTTATTGATTTGAGGGAGGTTCTGCCAGAATTTGTTAGGATTGGATTCTCCGCCGCCACGGGT CAGTGGATTGAGTTACATAACATACGTTCTTGGTCATTCAATTCAAGTTTGGATAATAATGGTGGTGGGAAAAACAACAA GGTTGAAATAGGAGTTGGAATAAGTGCTGGTTTTGGCTCTTTAACTTGTGTTATGGGTCTGCTATGGTTCATCTTTTGGA GGAAAAGAAATGGGCCAAAAGGGGAAGATTTTGATGCTTCTATGGATGATGAATTTGAGAGAGAAGCTGGTCCTAAAAGG TTCACCTACAAGGAACTAAGCAATGCAACAAAGGGCTTTGATGAGGCAGGAAAGCTTGGAGAAGGTGGATTTGGAGGTGT TTACAAAGGTGCTCTTGGAAAATCCAACCTCGAAGTGGCGGTGAAGAGGGTTTCAAAAGGATCAAAACAAGGGAAAAAGG AATACATATCAGAAGTAAGAGTAATCAGCAGGGTGAGACACAGAAATTTGGTTCAACTGTTAGGGTGGTGTCATGAGCAA GGAGAGCTTCTTCTTGTTTATGAATACATGCCTAATGGAAGCCTTGATTTTCATCTATTTAAAAACAAAGTCATGCTTAC TTGGACAATAAGGTACAAGGTAGCCCTGGGTTTGGCATCAGCCATTCTTTATCTTCATGAAGAGTGGGAACAGTGTGTGG TGCATAGAGATATTAAGTCAAGTAATATAATGCTCGATGCAAATTTCAATGCCAAGTTGGGTGACTTTGGTCTTGCAAGG CTGGTAGATCATGAACTTGGCTCTCAAACCACTGTTTTGGCTGGGACAATGGGGTATCTAGCTCCAGAGTGTGTCACAAC TGGGAAATCAAGCAAGGAATCTGATGTTTACAGCTTTGGTGTTGTTGCACTTGAAATCACATGTGGTAGAAGACCAGTTG ACTTAAAACAAGAGCCTGGTAAAGTTAGGCTTGTGGAGTGGGTTTGGGAGCTCTATGGAAAAGGGAAGCTAGGTGAAGCA GCTGATGAGGAGTTGAATTGGGGATTTGATGGGAGGCAAATTGAATGCTTGATGATAGTTGGCCTGTGGTGTTGTCATCC AGATCATACCATGAGGCCCTCTATTAGGCAAGTGATAAGTGTCCTCAATTTTGAAGCTCCTTTGCCTAGTCTTCCATCAA AGTTGCCTGTGCCAATGTACTATGCACCTCCCATGGAGATGTGCAAATTCTCATACACTACATCAGGAATCTCAAGTACA ACCAATGGATCTTCCACCTACTCATCATTGTCTGCAGGGTCCAGAAAATCTCTATTGTAG
Protein sequence (LotjaGi4g1v0172700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFPIFIIFTCCSYALFNTVDSISFNYTTFQPNLYLIHFEGDAFSSNDVLQLTKNQLDGPITRSVGRASFDQPVKLWDRET NELADFTTHFSFVMKSVNESRYGDGLSFFIAPFQSSIPNNSAGGFLGLFSEESALNTSKNQIVAVEFDSFKNDWDPSSNH VGINVNSIESVENVTWNSSMRNGRVGNTWISYNATSKNLSVFLTYANNPKFSGNSSLWHVIDLREVLPEFVRIGFSAATG QWIELHNIRSWSFNSSLDNNGGGKNNKVEIGVGISAGFGSLTCVMGLLWFIFWRKRNGPKGEDFDASMDDEFEREAGPKR FTYKELSNATKGFDEAGKLGEGGFGGVYKGALGKSNLEVAVKRVSKGSKQGKKEYISEVRVISRVRHRNLVQLLGWCHEQ GELLLVYEYMPNGSLDFHLFKNKVMLTWTIRYKVALGLASAILYLHEEWEQCVVHRDIKSSNIMLDANFNAKLGDFGLAR LVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRRPVDLKQEPGKVRLVEWVWELYGKGKLGEA ADEELNWGFDGRQIECLMIVGLWCCHPDHTMRPSIRQVISVLNFEAPLPSLPSKLPVPMYYAPPMEMCKFSYTTSGISST TNGSSTYSSLSAGSRKSLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| Phobius | 4 | 16 | 13 | - | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Gene3D | 19 | 271 | 253 | 3.2E-78 | – | |
| SUPERFAMILY | 20 | 257 | 238 | 1.73E-69 | ||
| CDD | 22 | 257 | 236 | 1.95784E-94 | ||
| Phobius | 22 | 269 | 248 | - | – | |
| Pfam | 22 | 260 | 239 | 3.8E-70 | ||
| PANTHER | 44 | 645 | 602 | 3.3E-244 | – | |
| PANTHER | 44 | 645 | 602 | 3.3E-244 | – | |
| ProSitePatterns | 143 | 149 | 7 | - | ||
| ProSitePatterns | 227 | 236 | 10 | - | ||
| Phobius | 270 | 292 | 23 | - | – | |
| TMHMM | 271 | 293 | 23 | - | – | |
| Phobius | 293 | 659 | 367 | - | – | |
| Gene3D | 304 | 409 | 106 | 1.3E-33 | – | |
| SUPERFAMILY | 314 | 604 | 291 | 8.09E-81 | ||
| ProSiteProfiles | 333 | 611 | 279 | 37.531 | ||
| SMART | 333 | 602 | 270 | 3.3E-41 | ||
| Pfam | 334 | 599 | 266 | 9.8E-50 | ||
| ProSitePatterns | 339 | 362 | 24 | - | ||
| CDD | 347 | 603 | 257 | 3.022E-90 | – | |
| Gene3D | 410 | 607 | 198 | 1.4E-58 | – | |
| ProSitePatterns | 453 | 465 | 13 | - | ||
| MobiDBLite | 638 | 659 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi4g1v0172700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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