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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0253800 |
| Transcript ID | LotjaGi4g1v0253800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent chaperone ClpB; TAIR: AT1G74310.1 heat shock protein 101; Swiss-Prot: sp|P42730|CLPB1_ARATH Chaperone protein ClpB1; TrEMBL-Plants: tr|A0A1J7I0F2|A0A1J7I0F2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0253800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:60779470..60781746) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATCCTGACAAATTCACCCACAAGACAAATGAAGCTCTTGCTGGGGCTCATGAACTGGCAATGAGTTCTGGACATGC TCAGATGACTCCTCTGCACCTAGCAAGCACCTTGATTTCTGACCCTAATGGCATTTTCTTCCAAGCAATTTCCAATTCCA GTGGAGAAGAATCTGCACGTGCTGTGGAGAGGGTTTTGAACCAGGCTTTGAAGAAGTTACCTTCTCAGTCCCCTCCTCCT GATGAGATTCCGGCGAGCACGACGCTTATTAAGGCCATTCGGAGAGCACAGGCGGCGCAGAAGTCCAGGGGTGATACACA TTTAGCAGTGGATCAGTTGATTTTGGGCATTCTTGAGGATTCTCAAATTGGTGACTTGTTGAAGGAAGCTGGTGTGGCTG CTGCTAAGGTTAAATCAGAGCTTGACAAGCTTCGTGGGAAGGTAGGGAAGAAGGTTGAGAGTGCATCTGGTGATACTACT TTTCAGGCTTTGAAGACTTATGGGAGAGACCTTGTGGAGCAAGCAGGGAAGCTTGATCCAGTTATTGGGCGTGATGAGGA GATAAGAAGGGTTGTGAGGATTTTGTCAAGGAGGACTAAGAATAACCCGGTTCTGATTGGAGAGCCTGGTGTTGGTAAAA CTGCTGTGGTGGAAGGCTTGGCACAGAGGATTGTTAGAGGGGATGTTCCCAGCAATCTTTCTGATGTTAGGCTTATTGCA TTGGACATGGGTGCTTTGGTTGCTGGTGCTAAGTATAGGGGAGAATTTGAGGAGAGGTTGAAGGCAGTTTTGAAAGAAGT GGAGGAGGCTGAGGGGAAAGTTATTCTGTTCATTGATGAAATTCATCTGGTTCTTGGTGCTGGTAGGACTGAAGGATCGA TGGATGCTGCCAACCTTTTTAAGCCTATGCTTGCTCGCGGCCAGCTTAAGTGTATCGGTGCCACAACGCTCGAGGAGTAT AGGAAGTATGTGGAGAAGGATGCAGCATTTGAAAGGAGGTTCCAACAGGTTTATGTGGCTGAACCTAGTGTGCCTGACAC CATTAGCATCCTTCGTGGACTAAAAGAGAGGTATGAAGGTCATCATGGTGTTCGGATTCTGGACCGTGCTCTTGTTGTGG CAGCTCAATTGTCTAGTCGGTACATTACAGGTATGCATTGCATTCTTTTCTCTTGGATGTGCTTGTCTTTTCCACCTTTC TCCTTTATGGAAACTTAATGATTTCATTGATTGTTCTTCTAATGTAATGAAATTGTGTTTTCTTTGTTCAGGGCGTCATC TTCCTGATAAGGCAATTGATTTAGTTGATGAGGCTTGTGCAAATGTGAGAGTTCAACTTGATAGCCAGCCTGAGGAAATT GATAACCTTGAAAGGAAGAGAATGCAGTTGGAAGTTGAACTTCATGCTTTGGAGAAAGAGAAGGACAAAGCTAGTAAAGC TCGCCTTGTAGATGTAAGTATTAGTCTGTTATGTTTAGTTCTTCAATTGATGTTTTCTACTCATATCTATTTTTGGCTTA TTTCAATGGTTCTAAATTTTGTTGCCATGTGCAGGTGAGGAGAGAACTTGATGACTTGAGAGACAAGCTTCAACCTCTGA TGATGAAGTATAGAAAAGAGAAGGAGAGGGTTGATGAGATTCGAAGGCTCAAGCAGAAAAGAGAAGAGCTTCTCTTTGCT GCACAAGAGGCTGAAAGACGATACGATCTAGCCAGAGCTGCTGACCTGCGATATGGTGCAATTCAAGAGGTGGAATCTGC AATTCAGCAGCTCGAAGGGAGCACTGATCAGGAGAACTTAATGTTGACAGAAACTGTTGGTCCAGATCAAATATCTGAGG TTGTGAGCCGCTGGACCGGTATTCCAGTGACAAGGCTTGGCCAAAATGAGAAAGAAAGGTTGATTGGACTTGGTGATAGA CTGCACAACAGAGTTGTAGGGCAAGACCAGGCTGTTAATGCTGTTGCTGAGGCTGTATTGAGATCAAGAGCTGGACTCGG GAGACCTCAACAACCAACTGGTTCATTCCTGTTTTTGGGTCCAACTGGTGTTGGCAAAACTGAACTTGCAAAGGCTCTTG CTGAGCAACTGTTTGATGATGAAAACCAGTTGGTGAGGATTGACATGTCTGAATACATGGAACAGCATTCTGTCTCAAGA CTGATTGGTGCACCACCAGGGTAAGTGTTGGTAATCAATTTAAGCTAGTTATTATTTATTCGCGTGTAAGAACAAAACGT AACTTCCTGTATTGAATTTCAGGTATGTTGGACATGA
CDS sequence (LotjaGi4g1v0253800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCCTGACAAATTCACCCACAAGACAAATGAAGCTCTTGCTGGGGCTCATGAACTGGCAATGAGTTCTGGACATGC TCAGATGACTCCTCTGCACCTAGCAAGCACCTTGATTTCTGACCCTAATGGCATTTTCTTCCAAGCAATTTCCAATTCCA GTGGAGAAGAATCTGCACGTGCTGTGGAGAGGGTTTTGAACCAGGCTTTGAAGAAGTTACCTTCTCAGTCCCCTCCTCCT GATGAGATTCCGGCGAGCACGACGCTTATTAAGGCCATTCGGAGAGCACAGGCGGCGCAGAAGTCCAGGGGTGATACACA TTTAGCAGTGGATCAGTTGATTTTGGGCATTCTTGAGGATTCTCAAATTGGTGACTTGTTGAAGGAAGCTGGTGTGGCTG CTGCTAAGGTTAAATCAGAGCTTGACAAGCTTCGTGGGAAGGTAGGGAAGAAGGTTGAGAGTGCATCTGGTGATACTACT TTTCAGGCTTTGAAGACTTATGGGAGAGACCTTGTGGAGCAAGCAGGGAAGCTTGATCCAGTTATTGGGCGTGATGAGGA GATAAGAAGGGTTGTGAGGATTTTGTCAAGGAGGACTAAGAATAACCCGGTTCTGATTGGAGAGCCTGGTGTTGGTAAAA CTGCTGTGGTGGAAGGCTTGGCACAGAGGATTGTTAGAGGGGATGTTCCCAGCAATCTTTCTGATGTTAGGCTTATTGCA TTGGACATGGGTGCTTTGGTTGCTGGTGCTAAGTATAGGGGAGAATTTGAGGAGAGGTTGAAGGCAGTTTTGAAAGAAGT GGAGGAGGCTGAGGGGAAAGTTATTCTGTTCATTGATGAAATTCATCTGGTTCTTGGTGCTGGTAGGACTGAAGGATCGA TGGATGCTGCCAACCTTTTTAAGCCTATGCTTGCTCGCGGCCAGCTTAAGTGTATCGGTGCCACAACGCTCGAGGAGTAT AGGAAGTATGTGGAGAAGGATGCAGCATTTGAAAGGAGGTTCCAACAGGTTTATGTGGCTGAACCTAGTGTGCCTGACAC CATTAGCATCCTTCGTGGACTAAAAGAGAGGTATGAAGGTCATCATGGTGTTCGGATTCTGGACCGTGCTCTTGTTGTGG CAGCTCAATTGTCTAGTCGGTACATTACAGGGCGTCATCTTCCTGATAAGGCAATTGATTTAGTTGATGAGGCTTGTGCA AATGTGAGAGTTCAACTTGATAGCCAGCCTGAGGAAATTGATAACCTTGAAAGGAAGAGAATGCAGTTGGAAGTTGAACT TCATGCTTTGGAGAAAGAGAAGGACAAAGCTAGTAAAGCTCGCCTTGTAGATGTGAGGAGAGAACTTGATGACTTGAGAG ACAAGCTTCAACCTCTGATGATGAAGTATAGAAAAGAGAAGGAGAGGGTTGATGAGATTCGAAGGCTCAAGCAGAAAAGA GAAGAGCTTCTCTTTGCTGCACAAGAGGCTGAAAGACGATACGATCTAGCCAGAGCTGCTGACCTGCGATATGGTGCAAT TCAAGAGGTGGAATCTGCAATTCAGCAGCTCGAAGGGAGCACTGATCAGGAGAACTTAATGTTGACAGAAACTGTTGGTC CAGATCAAATATCTGAGGTTGTGAGCCGCTGGACCGGTATTCCAGTGACAAGGCTTGGCCAAAATGAGAAAGAAAGGTTG ATTGGACTTGGTGATAGACTGCACAACAGAGTTGTAGGGCAAGACCAGGCTGTTAATGCTGTTGCTGAGGCTGTATTGAG ATCAAGAGCTGGACTCGGGAGACCTCAACAACCAACTGGTTCATTCCTGTTTTTGGGTCCAACTGGTGTTGGCAAAACTG AACTTGCAAAGGCTCTTGCTGAGCAACTGTTTGATGATGAAAACCAGTTGGTATGTTGGACATGA
Protein sequence (LotjaGi4g1v0253800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNPDKFTHKTNEALAGAHELAMSSGHAQMTPLHLASTLISDPNGIFFQAISNSSGEESARAVERVLNQALKKLPSQSPPP DEIPASTTLIKAIRRAQAAQKSRGDTHLAVDQLILGILEDSQIGDLLKEAGVAAAKVKSELDKLRGKVGKKVESASGDTT FQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLSDVRLIA LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLKCIGATTLEEY RKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYEGHHGVRILDRALVVAAQLSSRYITGRHLPDKAIDLVDEACA NVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVDVRRELDDLRDKLQPLMMKYRKEKERVDEIRRLKQKR EELLFAAQEAERRYDLARAADLRYGAIQEVESAIQQLEGSTDQENLMLTETVGPDQISEVVSRWTGIPVTRLGQNEKERL IGLGDRLHNRVVGQDQAVNAVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENQLVCWT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 631 | 631 | 0.0 | – | |
| PANTHER | 1 | 631 | 631 | 0.0 | – | |
| ProSiteProfiles | 3 | 147 | 145 | 40.604 | – | |
| Gene3D | 3 | 148 | 146 | 5.8E-39 | ||
| SUPERFAMILY | 4 | 158 | 155 | 1.77E-26 | ||
| Pfam | 17 | 55 | 39 | 2.5E-6 | ||
| Pfam | 96 | 146 | 51 | 3.5E-8 | ||
| Gene3D | 149 | 343 | 195 | 3.4E-71 | – | |
| SUPERFAMILY | 160 | 546 | 387 | 5.46E-94 | ||
| CDD | 182 | 337 | 156 | 4.29571E-23 | – | |
| SMART | 199 | 344 | 146 | 2.4E-10 | ||
| Pfam | 204 | 317 | 114 | 9.4E-14 | ||
| Coils | 253 | 273 | 21 | - | – | |
| ProSitePatterns | 295 | 307 | 13 | - | ||
| Pfam | 344 | 443 | 100 | 1.7E-35 | ||
| Gene3D | 344 | 545 | 202 | 2.0E-71 | – | |
| Coils | 406 | 440 | 35 | - | – | |
| Coils | 473 | 493 | 21 | - | – | |
| SUPERFAMILY | 547 | 631 | 85 | 1.75E-20 | ||
| Gene3D | 551 | 633 | 83 | 1.3E-22 | – | |
| CDD | 572 | 624 | 53 | 2.63209E-6 | – | |
| Pfam | 598 | 631 | 34 | 1.9E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein metabolic process | The chemical reactions and pathways involving a protein. Includes protein modification. |
Expression pattern of LotjaGi4g1v0253800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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