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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0008200 |
| Transcript ID | LotjaGi5g1v0008200.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase family protein; TAIR: AT3G26560.1 ATP-dependent RNA helicase; Swiss-Prot: sp|Q38953|DEAH5_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5; TrEMBL-Plants: tr|A0A1J7GSK6|A0A1J7GSK6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0008200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:1790558..1797484) extracted from Lotus japonicus Gifu genome v1.2.
TGGTGTTATCTTTTTTCACTTGGCACCGTCTTTGACTACACGCGCACACGCACGCGCTGCTGTAATCAAATCAGAGGTTC TAGATTTGGGGTTTAGGGTTTCGCCATTCCCAATCGATTCTCATCTTCTCACACACAGTTTTGCTGCTATCTTCTCCACC AATGGTTTCCGATAGTAGCCCTCATTCTCCTCCAGATGATGGATTGAAGAAGAAGCTCGATGATGGATTGAAGAAGAAAC TCGAGTACTTGTCGTTGGTATCAAAGGTGTGCACTGAGTTGGAATCTCACACCGGCACCGGCGACAAGGTCCTCGCCGAG TTCATCACCGAGTTGGGTCGCGACTCCGAGAACGTCGAGGAATTTGATGCCAAGTTGAAGGAGAATGGTGCTGAGATGCC TGATTACTTCGTCAAAACACTCCTCACCATCATTCACGCCATTCTCCCACCGAAACCGAGGAAGGAGAAGGAGAAGGAGA GGGGTGGTGCTGCCGGTGGGAAGACTAAGTTCAAGGCTCTTGCTATAGCGGATGATAGGGACCGTGTCAAGGAGCTTCAG AAGGAGATTGAGAGTGAGGCCAGGCAGAAAGAACCGGCAGATGATGATGATAGATACGTGGATAGGGATAGAAGAGATAG ACGCAGAGATCATCGGTATGGTGGAGATGACAGAAGGGATTATAGAAGGGGAAATGGTAGAGATAGAGATAGAGAGAGGG ATAGGGATAGGGATGTGGACAGAGAGAGAGATAGAGATCGAGGGAGAGACAGGTATGATAGGCGTAGGAGAGATGGGTAT GAAGAGGATGAGCGTGGAAGGGAGGATGATGAAGGGAGAGGTCGGAGGGATTCAAGACATGGGTATGAAGAGGATGAGCG CGGAAGGGGGGAGAATGGCGAAGGGAAAGGTCGTAGCGATTCAAGACATGGGTCTGGTGAGCCTGAACTGTATATGGTTT ATAAAGGTAGAGTGTCAAGGGTTATGGATACTGGCTGCTTTGTTCAGTTGGATGATTTTAGAGGGAAGGAGGGTTTGGTG CATGTTTCTCAGATTGCTACTAGAAGGATTACTAATGCCAAGGATGTTATCAAGCGAGATCAGGAGGTTTATGTGAAGGT GATATCGGTTTCTGGTAACAAGTTGAGTCTTGCCATGAGGGATGTTGATCAGCATACAGGGAAGGATCTTCTTCCGTTAA AGAAGAGCTCCGAGGATGATGCTCCGAGGATGAATCCGCAGGGCTTGAGGGATGGGCCGGTTTCCAGGACGGGGCTTTCT GGGATAAGGATTGTGGAGGAGGATTCTGTTGGTGGTTCTTCGCGGAGGCCTTTGAAGAGGATGAGCTCTCCTGAGATATG GGAAGCGAAACAGTTGATTGCTTCGGGAGTTATGAGTGTTTCGGAGTATCCGACTTATGATGAGGAGGGAGATGGGTTGT TGTATCAGGAAGAAGATGCTGAGGAAGAGCTCGAGATTGAGATGAATGACGACGAACCTGCCTTCTTGCAAGGGCAGAGC AGGTACTCAATGGATATGTCTCCTGTTAAGATTTTTAAGAATCCAGAAGGCTCTCTGGGTCGTGCTGCGGCGCTCCAGTC TGCACTTATAAAGGAGCGGAGGGAAGTAAGAGAGCAGCAACAGCGTACAATGCTTGATTCAATTCCAAAAGATCTCAATC GTCCTTGGGAAGACCCTATGCCAGAGACGGGTGAAAGACATCTTGCCCAGGAGCTCAGGGGTGTTGGTTTATCAGCCTAT GATATGCCTGAATGGAAGAAGGATGCCTATGGGAAAACCATTACTTTTGGGCAGAGGTCAAAGCTTTCTATTCAGGAGCA GAGGCAGAGTTTGCCAATTTACAAGTTGAAAAAAGAATTGATTCAGGCAGTCCATGATAATCAGCTGCTGGTGGTGATTG GTGAAACTGGTTCAGGTAAAACTACTCAGGTCACACAGTATCTTGCTGAAGCGGGTTACACCACAAGAGGTAAAATTGGA TGTACTCAACCCCGTAGGGTGGCTGCGATGTCAGTTGCAAAGAGAGTTGCAGAAGAGTTTGGTTGTAGATTAGGAGAGGA AGTTGGTTATGCCATTCGTTTTGAGGATTGCACTGGACCTGATACTGTAATCAAGTACATGACGGATGGTATGCTCCTTA GGGAAATATTGGTTGATGAGAGTCTATCACAGTATTCTGTTATCATGCTTGATGAAGCCCATGAAAGAACAATTCATACC GATGTTCTTTTTGGACTCCTGAAGCAGCTAGTGAAGCGTAGACCTGAATTGCGATTGATTGTCACATCTGCTACTCTGGA TGCTGAGAAGTTTTCAGGATATTTCTATAACTGTAACATCTTCAGAATTCCTGGGAGAACTTTTCCTGTGGAGGTACTTT ATACTAAACAGCCAGAAAGTGATTACCTAGATGCATCTTTAATCACTGTTCTACAGATCCACTTGACAGAACCTGAAGGG GACATTCTTCTATTTTTGACTGGTCAAGAGGAGATTGATTTTGCTTGTCAGTCTCTCTATGAGAGAATGAAGGGGTTAGG TAAGAATGTACCAGAGCTGATTATTTTGCCTGTTTATAGTGCCCTTCCTAGTGAAATGCAATCTAGGATATTTGATCCTG CTCCTCCTGGGAAAAGGAAAGTAGTAGTGGCTACTAACATTGCTGAGGCTTCCTTGACTATTGATGGAATATTTTATGTC ATTGATCCTGGATTTGCGAAGCAAAATGTTTATAACCCCAAGCAAGGTCTTGATTCTTTGGTCATAACTCCAATCTCTCA AGCATCAGCCCAACAAAGAGCTGGACGTGCAGGGCGCACTGGACCTGGAAAGTGTTATCGTCTCTATACTGAGAGTGCAT ATAGGAATGAGATGTCTCCTACTTCAATTCCAGAGATTCAAAGGATAAATTTGGGGACGACTACTCTTAATATGAAAGCT ATGGGGATAAATGATCTTCTGTCCTTTGATTTTATGGATCCGCCATCACCCCAAGCTCTTATTTCTGCCATGGAGCAGTT GTACAGTCTTGGAGCATTGGATGAAGAGGGCCTTTTAACCAAATTGGGGAGGAAAATGGCAGAATTTCCTTTGGATCCAC CGTTGTCCAAGATGCTGCTTGCCAGCGTAGACCTTGGATGCAGTGATGAGATTTTGACCATAATTGCCATGATCCAGACA GGCAATATTTTTTACAGGCCCAGGGAAAAGCAAGCCCAAGCAGATCAAAAGAGGGCAAAGTTTTTCCAGCCCGAGGGTGA CCATCTTACACTACTTGCTGTTTATGAGGCTTGGAAAGCTAAGAATTTTTCTGGGCCATGGTGTTTTGAGAATTTCGTTC AATCTCGATCCTTGAGAAGAGCACAGGATGTTAGGAAACAGCTTCTTACCATCATGGATAAGTAAGATATTTATCTATCA ATCATCCCACATGTTTTATTTGCTTTGATTTTTTTCTCTTTGCTATGTTCTCTACATGTCTTTGTTGTTCTACATATTTA GTTGCTCCCAATAGTATTATACATATGCATGTTCTTCTCTTTTTACATTGTGCTGTGACTTGTAGTTTTTTTGATGACAT TATTCTCATGCGTTTATTAGATTGAATTGTGTTCTAAATCACCATGACTTATATTCAGGTACAAGTTGGATGTTGTAAGT GCTGGAAAAAACTTCACGAAGATCAGGAAGGCTATCACTGCAGGTTTCTTCTTTCATGCAGCTAGGAAGGACCCTCAAGA AGGTTACAGAACTCTAGTTGAGAATCAGCCTGTTTATATCCATCCAAGCTCAGCTTTGTTCCAGAGACAGCCAGATTGGG TCATATACCATGAACTTGTGATGACTACTAAGGAATATATGCGTGAGGTCACCGTCATAGACCCCAAATGGCTTGTTGAA TTGGCTCCAAGGTTCTTCAAAGTGGCTGATCCTACAAAGATGAGCAAGCGAAAGCGTCAAGAGCGTATAGAACCACTTTA TGATAGATATCACGAACCAAACTCGTGGCGTTTGAGCAAGCGCCGCGCATGATATGTAACAATCTGCTTCCTCTTAATGC AATGTTTTGGATACAATTTATGTTGCATTAGTTTTGAATTTGAATTTTATCTATATGATTATTCATATGATATGAGATTT TAGAGCATGTTTGGTTTCAAGGTTAAATGATCTAGAAGCAATTCTAGTTAGAATGTAAAAGTTTTAGCTTCTGAGTGAAT TATGCTTTAGATTCTGTGCAAGTCATGAAATCAAACATGCTAGAAGACATATTTGTTTGTTAGTTGGATTATTTAAATTA TGCTTCAGAAAGGATTTTTTAGCAGAACTGAAACAAAGTGGTTGGATCTTGTCTCTAATTCAAACTCATCTTCAAAGAAA TAAAGACAACATTCTTGTTTAGTGCTACTGATCGGCATCAAGTCCTGAAATATAGTGAGATAGAGGATCTGACTTTGACA TTTGAAGATTATTGAAGTTTTTTGCACTGTTAGACTTTATTTTTAACTGTATGCAGCTCGATTCATCTTTGGATAAATGA GATGATAACTTTCAAAGGTTTTGAAAATACAAGAAGTAATTAATGTAGTCTTGTGAAGAGTAATGGCATCCGAAATTTAT GTTTGGGTACCTGTTGTGGTACAAGTGTAAAAAGATGTTGACACTTATTTTGAGACAAAGTGAATATATTTTCTTTTATG AATGGGATGTATGTCGGTTACGTTGCACTGAACTGGTATTTAGAAGTATTTAAGGATATATTAACAGAAATGAGATTTAC CACTTATGTAGTAGTTGTTTTTTTGTCCCTGTTGAGCAAGATACTTGGATCTATAGTATGATACATAGCTTGAGGTGGAG TTTCAAGTTAAAACAAAACTTAGTAATTTTGGCACAAAGAGCCATGAAGGGTAAACTGGGAGACTGGAAAGAGTTCTTGA ACAGTTATGATAAAAAGTTCTGGGCAAGTGGAAGTGATCAAGCATAGAGGCCCCATGAAATCTTGGCTGCATTTCTAAAG ACTTTCTCTATAGATGTTGGTGTTGAAGACTATCAAGAAAATACTGATACTAATGAGTTGGGTGAAGACTCATGTATTTA TTTTCTTTTCTTATATTACATCATTTGTCTCATTATATTGAACTCTTTTCTCTTCCTCCTTTTGTTTAGTTTCTTTAAAT AATGATGCTTCTGTGAAATTAAGCTCAATATTAAGGAGCAGCTTTTGAATGATGGGAAATGATAGTTTTAGTATCTAACC CTCTCCAATCTTAGCTTCTCCTATTTCATCTCAACTCCTTCAATGGCATCTGAAGGTATTTTTCCCTTTCTTTTTATTTT ACTTGTTTTTTGTGCTTAGGTAGGATGGTTAGTTACTTTTCTGTACAATTTCAGGGAACATGTTCTCAAACCTTGGTGGA TTTAAGTTATGGTTCTCTTGTCATCATGGAGCTTGAGCAATTGGTCTCCTAGAAGCACTTGGCCTCTGAGAACTTGTCTT TGGCAGCTGATTTCCTTGTGAAGCATCCTAATGTTCGTTTAACAGACAATTTACTTAGTAACAGATACAAGGGTTATGCT TACAACTGTAATTGTCTCTACTGGTCAGGTATTATCACTTGAACTAATGAAAGATCCTGTAGTTGTCTCTACTGGTTAGG TATTATCACAAATTACCTGTGTGTGGCACTGCTATGATAGTATCAGGTATGATTTTATTCATAAACTCTCTACTTTCTTT TGCAAATATATGAAAGATGCTTCATTCAAAATATGGGTCAATGCTGGTCACAGAACCTGCCCCGAGACACTTCAGCATAC AACCCTTACTCCTAATTATGTTTTGAAGAGTCTGATTGCTTTATGGTGTGGAAGCAATGGTGTTGAGCTACGGAAGAAAC AAGGGAGTTGTAGAACAAGAGTCTAATTGCTAGATGATTGATCATTTGTATGTTGAATATAATTTTTAGTGTTTTGTAGG TTTACTAGGGTAAGAAATTCCAATGATTTGAATGAGTATGGGGTCATTTAGCTTAAGGGTGCAATTTCCGTGTTTTATAT CATCACTGCCGCAATGGTTTTGTTTTTTCTGTAAACCCACTTTTACAGGTTCCGGTTGCAAGTCATAGTGAAAAAAAATA AAGTGCAGAAGTCATTGCTGCAGTGGATTTTCAAGGTCAACTTGATGACAAGTAAAAAACTGGGGGATGGCTTGCAACAT TGCTCATCTTAGGCTCTTCAAAAGGCGGCGGTGAACCCTCCATGGCTGGGAATCAAAAGGCTCTAGATACCATATTAGAA AAAAAGAGAGAGAATGAAAACTGTTTCTGGTAGAAAATGATTGATTGGTTACAGAGTTTTACTGATGTAACTATATGTAA AAGTATACTATGGAAGCTTCTAGAGGAAGCAACCGACTAACAATAACAGAGACTCTGTCCATAACCACTTACTAGACAAT ACTACACTAGTAAGCACATGCATTTTTGCAAATGCTAACCATTTATAATACTGGCTAAGGAGTCAAGATATAAGAAGTTT TAATTGGGATGTATAGCATTTAAGCTACATGAGCTTTTCACACCTCAATACAAATTACACCTTACATTGCACTCTCTTCT TTTCTCATCATAATTCTCATTTGCTCTCATGTCTCTTTCTTTTTCATTCTTACTTCCACCTCGTTAACACTTTTGAAAAG TATGGAAACATTCTTGTATGTTACCTATGTGTTAAACAATAAATGATTACTTTTTGTTTCTTAATGCTAACAATGGTGGT ACGACTACACTTTACATTTACCATGTAAAGTGAGCACGACAACTATTAATTGAGTTTTTTTTTTACTTTTCAAAAGTATG TAATCACTATTAATGGTTTTGATATACCTTTTACCGTGTAAAGTGAG
CDS sequence (LotjaGi5g1v0008200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCCGATAGTAGCCCTCATTCTCCTCCAGATGATGGATTGAAGAAGAAGCTCGATGATGGATTGAAGAAGAAACT CGAGTACTTGTCGTTGGTATCAAAGGTGTGCACTGAGTTGGAATCTCACACCGGCACCGGCGACAAGGTCCTCGCCGAGT TCATCACCGAGTTGGGTCGCGACTCCGAGAACGTCGAGGAATTTGATGCCAAGTTGAAGGAGAATGGTGCTGAGATGCCT GATTACTTCGTCAAAACACTCCTCACCATCATTCACGCCATTCTCCCACCGAAACCGAGGAAGGAGAAGGAGAAGGAGAG GGGTGGTGCTGCCGGTGGGAAGACTAAGTTCAAGGCTCTTGCTATAGCGGATGATAGGGACCGTGTCAAGGAGCTTCAGA AGGAGATTGAGAGTGAGGCCAGGCAGAAAGAACCGGCAGATGATGATGATAGATACGTGGATAGGGATAGAAGAGATAGA CGCAGAGATCATCGGTATGGTGGAGATGACAGAAGGGATTATAGAAGGGGAAATGGTAGAGATAGAGATAGAGAGAGGGA TAGGGATAGGGATGTGGACAGAGAGAGAGATAGAGATCGAGGGAGAGACAGGTATGATAGGCGTAGGAGAGATGGGTATG AAGAGGATGAGCGTGGAAGGGAGGATGATGAAGGGAGAGGTCGGAGGGATTCAAGACATGGGTATGAAGAGGATGAGCGC GGAAGGGGGGAGAATGGCGAAGGGAAAGGTCGTAGCGATTCAAGACATGGGTCTGGTGAGCCTGAACTGTATATGGTTTA TAAAGGTAGAGTGTCAAGGGTTATGGATACTGGCTGCTTTGTTCAGTTGGATGATTTTAGAGGGAAGGAGGGTTTGGTGC ATGTTTCTCAGATTGCTACTAGAAGGATTACTAATGCCAAGGATGTTATCAAGCGAGATCAGGAGGTTTATGTGAAGGTG ATATCGGTTTCTGGTAACAAGTTGAGTCTTGCCATGAGGGATGTTGATCAGCATACAGGGAAGGATCTTCTTCCGTTAAA GAAGAGCTCCGAGGATGATGCTCCGAGGATGAATCCGCAGGGCTTGAGGGATGGGCCGGTTTCCAGGACGGGGCTTTCTG GGATAAGGATTGTGGAGGAGGATTCTGTTGGTGGTTCTTCGCGGAGGCCTTTGAAGAGGATGAGCTCTCCTGAGATATGG GAAGCGAAACAGTTGATTGCTTCGGGAGTTATGAGTGTTTCGGAGTATCCGACTTATGATGAGGAGGGAGATGGGTTGTT GTATCAGGAAGAAGATGCTGAGGAAGAGCTCGAGATTGAGATGAATGACGACGAACCTGCCTTCTTGCAAGGGCAGAGCA GGTACTCAATGGATATGTCTCCTGTTAAGATTTTTAAGAATCCAGAAGGCTCTCTGGGTCGTGCTGCGGCGCTCCAGTCT GCACTTATAAAGGAGCGGAGGGAAGTAAGAGAGCAGCAACAGCGTACAATGCTTGATTCAATTCCAAAAGATCTCAATCG TCCTTGGGAAGACCCTATGCCAGAGACGGGTGAAAGACATCTTGCCCAGGAGCTCAGGGGTGTTGGTTTATCAGCCTATG ATATGCCTGAATGGAAGAAGGATGCCTATGGGAAAACCATTACTTTTGGGCAGAGGTCAAAGCTTTCTATTCAGGAGCAG AGGCAGAGTTTGCCAATTTACAAGTTGAAAAAAGAATTGATTCAGGCAGTCCATGATAATCAGCTGCTGGTGGTGATTGG TGAAACTGGTTCAGGTAAAACTACTCAGGTCACACAGTATCTTGCTGAAGCGGGTTACACCACAAGAGGTAAAATTGGAT GTACTCAACCCCGTAGGGTGGCTGCGATGTCAGTTGCAAAGAGAGTTGCAGAAGAGTTTGGTTGTAGATTAGGAGAGGAA GTTGGTTATGCCATTCGTTTTGAGGATTGCACTGGACCTGATACTGTAATCAAGTACATGACGGATGGTATGCTCCTTAG GGAAATATTGGTTGATGAGAGTCTATCACAGTATTCTGTTATCATGCTTGATGAAGCCCATGAAAGAACAATTCATACCG ATGTTCTTTTTGGACTCCTGAAGCAGCTAGTGAAGCGTAGACCTGAATTGCGATTGATTGTCACATCTGCTACTCTGGAT GCTGAGAAGTTTTCAGGATATTTCTATAACTGTAACATCTTCAGAATTCCTGGGAGAACTTTTCCTGTGGAGGTACTTTA TACTAAACAGCCAGAAAGTGATTACCTAGATGCATCTTTAATCACTGTTCTACAGATCCACTTGACAGAACCTGAAGGGG ACATTCTTCTATTTTTGACTGGTCAAGAGGAGATTGATTTTGCTTGTCAGTCTCTCTATGAGAGAATGAAGGGGTTAGGT AAGAATGTACCAGAGCTGATTATTTTGCCTGTTTATAGTGCCCTTCCTAGTGAAATGCAATCTAGGATATTTGATCCTGC TCCTCCTGGGAAAAGGAAAGTAGTAGTGGCTACTAACATTGCTGAGGCTTCCTTGACTATTGATGGAATATTTTATGTCA TTGATCCTGGATTTGCGAAGCAAAATGTTTATAACCCCAAGCAAGGTCTTGATTCTTTGGTCATAACTCCAATCTCTCAA GCATCAGCCCAACAAAGAGCTGGACGTGCAGGGCGCACTGGACCTGGAAAGTGTTATCGTCTCTATACTGAGAGTGCATA TAGGAATGAGATGTCTCCTACTTCAATTCCAGAGATTCAAAGGATAAATTTGGGGACGACTACTCTTAATATGAAAGCTA TGGGGATAAATGATCTTCTGTCCTTTGATTTTATGGATCCGCCATCACCCCAAGCTCTTATTTCTGCCATGGAGCAGTTG TACAGTCTTGGAGCATTGGATGAAGAGGGCCTTTTAACCAAATTGGGGAGGAAAATGGCAGAATTTCCTTTGGATCCACC GTTGTCCAAGATGCTGCTTGCCAGCGTAGACCTTGGATGCAGTGATGAGATTTTGACCATAATTGCCATGATCCAGACAG GCAATATTTTTTACAGGCCCAGGGAAAAGCAAGCCCAAGCAGATCAAAAGAGGGCAAAGTTTTTCCAGCCCGAGGGTGAC CATCTTACACTACTTGCTGTTTATGAGGCTTGGAAAGCTAAGAATTTTTCTGGGCCATGGTGTTTTGAGAATTTCGTTCA ATCTCGATCCTTGAGAAGAGCACAGGATGTTAGGAAACAGCTTCTTACCATCATGGATAAGTACAAGTTGGATGTTGTAA GTGCTGGAAAAAACTTCACGAAGATCAGGAAGGCTATCACTGCAGGTTTCTTCTTTCATGCAGCTAGGAAGGACCCTCAA GAAGGTTACAGAACTCTAGTTGAGAATCAGCCTGTTTATATCCATCCAAGCTCAGCTTTGTTCCAGAGACAGCCAGATTG GGTCATATACCATGAACTTGTGATGACTACTAAGGAATATATGCGTGAGGTCACCGTCATAGACCCCAAATGGCTTGTTG AATTGGCTCCAAGGTTCTTCAAAGTGGCTGATCCTACAAAGATGAGCAAGCGAAAGCGTCAAGAGCGTATAGAACCACTT TATGATAGATATCACGAACCAAACTCGTGGCGTTTGAGCAAGCGCCGCGCATGA
Protein sequence (LotjaGi5g1v0008200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSDSSPHSPPDDGLKKKLDDGLKKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRDSENVEEFDAKLKENGAEMP DYFVKTLLTIIHAILPPKPRKEKEKERGGAAGGKTKFKALAIADDRDRVKELQKEIESEARQKEPADDDDRYVDRDRRDR RRDHRYGGDDRRDYRRGNGRDRDRERDRDRDVDRERDRDRGRDRYDRRRRDGYEEDERGREDDEGRGRRDSRHGYEEDER GRGENGEGKGRSDSRHGSGEPELYMVYKGRVSRVMDTGCFVQLDDFRGKEGLVHVSQIATRRITNAKDVIKRDQEVYVKV ISVSGNKLSLAMRDVDQHTGKDLLPLKKSSEDDAPRMNPQGLRDGPVSRTGLSGIRIVEEDSVGGSSRRPLKRMSSPEIW EAKQLIASGVMSVSEYPTYDEEGDGLLYQEEDAEEELEIEMNDDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQS ALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQ RQSLPIYKLKKELIQAVHDNQLLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEE VGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLD AEKFSGYFYNCNIFRIPGRTFPVEVLYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLG KNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQ ASAQQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQL YSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGD HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQ EGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPL YDRYHEPNSWRLSKRRA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 95 | 119 | 25 | - | – | |
| MobiDBLite | 96 | 112 | 17 | - | – | |
| Coils | 122 | 142 | 21 | - | – | |
| MobiDBLite | 131 | 258 | 128 | - | – | |
| MobiDBLite | 131 | 261 | 131 | - | – | |
| PANTHER | 217 | 1216 | 1000 | 0.0 | – | |
| PANTHER | 217 | 1216 | 1000 | 0.0 | – | |
| Gene3D | 259 | 344 | 86 | 6.0E-25 | – | |
| SMART | 262 | 333 | 72 | 2.7E-16 | ||
| SUPERFAMILY | 263 | 340 | 78 | 2.01E-14 | ||
| CDD | 264 | 340 | 77 | 8.15933E-35 | – | |
| ProSiteProfiles | 264 | 333 | 70 | 16.624 | ||
| Pfam | 265 | 326 | 62 | 7.7E-13 | ||
| MobiDBLite | 341 | 358 | 18 | - | – | |
| MobiDBLite | 341 | 370 | 30 | - | – | |
| Coils | 475 | 495 | 21 | - | – | |
| Gene3D | 536 | 739 | 204 | 1.6E-89 | – | |
| SUPERFAMILY | 554 | 1087 | 534 | 3.51E-133 | ||
| CDD | 559 | 737 | 179 | 6.22935E-125 | – | |
| SMART | 562 | 746 | 185 | 1.2E-32 | ||
| Pfam | 570 | 720 | 151 | 1.6E-7 | ||
| ProSiteProfiles | 574 | 737 | 164 | 19.821 | ||
| ProSitePatterns | 679 | 688 | 10 | - | ||
| Gene3D | 740 | 914 | 175 | 3.1E-71 | – | |
| CDD | 741 | 902 | 162 | 5.62182E-82 | – | |
| ProSiteProfiles | 762 | 935 | 174 | 17.276 | ||
| Pfam | 764 | 894 | 131 | 2.0E-12 | ||
| SMART | 790 | 894 | 105 | 1.4E-18 | ||
| SMART | 955 | 1045 | 91 | 2.1E-41 | ||
| Pfam | 956 | 1044 | 89 | 5.1E-25 | ||
| Pfam | 1102 | 1177 | 76 | 7.7E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi5g1v0008200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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