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LotjaGi5g1v0090000.1

Overview

Field Value
Gene ID LotjaGi5g1v0090000
Transcript ID LotjaGi5g1v0090000.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT2G36570.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SJQ1|PXC1_ARATH Leucine-rich repeat receptor-like protein kinase PXC1; TrEMBL-Plants: tr|I1LZE4|I1LZE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0090000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:15635779..15644178) extracted from Lotus japonicus Gifu genome v1.2.

ACCTTAATAAAATAATCATACTTAGTATATATCTTTGTTTGTTCCACAAGTATCTTGCTCTTACTAAATTCGTCCTAACA TTGGATCAAACTAAGGCTGGATCCATTCTATAGAAGTAGTACTATAAAGCTCTGGCAGACTGGCACAATACATTATACAT GAGATCACCAGAATCAAGAAGCATGGCATTTTTCCCTTTTCTTTTACCCTATATATCACACAACATACCAACCAAAAGAA AAAGCAAAAACCTTGTTGTTCAGCCTCAGTGACTGTATCTTCAATAAAGGAGTAGTGGACAACAGCAATCATTCACACAA CAACCATTCCCTCCCTTTAATCATCAAAAGATTCCCTCTGTCCTTATCACAAAGAACATATAATAATACCTCCACACTCA CCCTCATCATTCCCATGATAATCACTTTACAATTTTTGCCTCAAAATTCTTCATCATAATATAACTCTTATTCACTCTCA CTCATTTATTAAATTTTTGAAAAACACAACCATTGTTTTGTTTCCACTTCATTCCCGCCAGAGAGTACAAACAACAACAT GAACCATGTCTTGTTCTTCTTGTTGTTCTTCTTCTTCCACTTGGTGTTACCATGTCTGTCGACACTGAGTCTCCACCATA ATGACACACATGCACTCACCCTCTTCCGCCGCCAAACTGACTCACACGGCCGCCTCCTCTCCAACTGGACAGGAGGCGAT GCCTGCGTCGCCGCCTGGCGCGGCGTCGCTTGCTCCCAAAACGGCCGAGTCACTTCCCTCTCCCTCCCTTCCCTCAACCT CCGAGGACCCATCGACGCTCTCTCCCCTCTCTCCCACCTCCGCCTCCTCGACCTCCATGAAAACCGCCTCAACGGCACGG TTTCCCCGTCGCTCCTCTCCAACTGCACCAACCTCAAGCTCCTCTACCTCGCCGGAAACGACTTCTCCGGCCACATCCCG CCGGAGATTTCCTCCCCGAAGTTCCTCCTCCGCGTCGATCTCTCTGACAACAACCTCGCCGGCGACCTCCCCGGAGAAGT TTCTCATCTCTCCAGCCTCCTCACCCTCCGCCTCCAGAACAACGCCCTCACCGGCCGCGTCCCCGACCTCTCCGCCGCCA TGCCGAACCTCACAGAACTCAACTTGACCAACAACGAATTCTCCGGCCACGTACCCTCCTCCATGCTCAGCAAATTCGGC GAAGAAACATTCTCCGGCAACGAAGCTCTCTGCAGTGCCAGCGCCGGAACACTCCCTGCTTGCTCCACCGCCGACAACCT CCCTTCTCATCCTCCTGTTCAAACCGTTCCTTCAAACCCGAGCCGGTTCCCGGAAACCAGCATAATCGCCAGACCGGGAA CCAAACCACCGCGCAAGGGTTTAAGCCCCGGCGCCATCGTCGCCATAGTGGTGGCGAATCTCGTCGCGCTGCTAGTTGTA ACTTCCTTCGTTGTAGCTCATTGCTGTGCCCGAGGAAACGGGTCCCACCCTAACTCCCTGGTGGGTCCCAGTGAGAAACG GAAGAGTGGGAGCAGTTACGGCAGCGAGAAGAAGGTGTACGCGAGCGGCGACAGCGACGGAACCAGCGGCACGGAGAGGA GCAAGCTGGTGTTTTTCGACCGGAGGGGTGAGTTTGAATTGGAGGATCTTCTCCGTGCTTCGGCGGAGATGCTCGGGAAG GGTAGTTTGGGAACGGTTTATAGGGCGGTGCTTGATGATGGATCCACCGTTGCTGTGAAGAGGCTCAAGGATGCAAATCC ATGTGCTAGACATGAATTTGAACAGTATATGGATGTGATTGGGAAGCTTAAGCATCCAAACATTGTTAAGCTTAGAGCTT ATTACTATGCTAAAGAAGAAAAGCTTCTTGTCTATGATTACCTCTCCAATGGAAGCCTACATGCTCTTCTTCATGGTTAG TTTTTCTCTATATTCATTTTAGACTTAATTGCACTTTTCGTCTCTAATTTTAGACCCTTGTGCAATTTTGTGTTTGTGTA CGGACGTTGCTCTCATAACATAAAGTTTCTGGATCTGTCACTTTCAACTGATAATTAGTCTTTGCCTATTCACTAGTTTG TTGCGCTCATAACATAAAGTTTATGGATACGTTACTGATTTGGTTGGATGTTGATAGGGAATCGTGGTCCGGGGAGAATT CCGTTGGATTGGACTACTAGAGTGAGCTTGGCGTTAGGAGCGGCGAGAGGGTTGGCTCGGATTCATGCGGAGTACAGCAC GGCGAAAGTGCCTCATGGGAATGTGAAATCTTCCAATGTGCTTCTGGACAAGAATGGTGTGGCTTGCATCTCTGATTTCG GGTTGTCATTGCTGCTGAACCCGGTTCATGCGATTGCGAGATTGGGTGGTTATAGGGCACCGGAACAGGCTGAGCAGAAG AGGCTTTCACAGCAAGCTGATGTGTATAGTTTTGGGGTGTTGTTGTTGGAAATTCTAACAGGGAGAGCTCCTAATTCATC ATCACAGTATCCTTCCCCTGAGAAACAAGAAGCTAGTGTGGATCTTCCAAATTGGGTTCGCTCTGTTGTGAAGGAAGAGT GGACTGCGGAGGTGTTTGATCAAGAACTTTTGCGGTACAAGAACATTGAGGAAGAGCTTGTGTCAATGCTGCAAGTTGGG TTGGCTTGTGTAGTGCCGCTTCCGGAGAAGAGGCCAACCATGGCGGAGGTTGTGAAGATGGTTGAGGATATCAGGGTGGA GCAATCTCCTCTGGGGGAGGACTATGATGAATCGCGAAATTCGCTTTCGCCTTCAGTTCCAACCACTGAAGATGGTCTTG CTTAGCAGTACTAGCATATATTTAGCAGTAAACTGTGTTTGCATGCTCCTCTTCTAGTTGCATTGTCTTGCTGCAAATTA TTTATTGATGTTTCTGGCTCTTAATTCTGTTAAGTGTTCTTGTAAAATTTAATTGTGAGCTTTGTGGAACTCCATTGTTT AACGTAGCAGAAATCTTATGATCTTGAGATTGAGCTTAGAATAAGTCTTCTTGTGTAGTTGAAATTGTATAATGTACATT TGAAGTTTGCAGCAGTGGACATTACTGATATATTTCAATGGGCAATCATGAGTTGTGTCACTGACTCACTGTCTGGTGTT TATTTGACACTTGTTAATTGAAAATTGCTTTGTTAAATTTCTACCATTGGTTAAGGGGGAAAGCTAGTTCACAAGCACCA AATCTCTCTCACAAGCAACTTTGAAATCATGGGATTTGCTTAAAAGCGCTTTCAAAAGCTAGCATGCGACATATGATTTC AGTTAACTGCATGCCATTACAATTAGTGAATACCTTTAAATTATTCAACACAAGAACTATAAATCTCAGGCAAAATTCAA AAAGTTTTCACGTTCCACATTAAGATATTGTTTTAAGGAAAGACAGCTTCATTGTCAAAAAATGAAAAAAAAAAAAAAAA AAAAAAAAAAAGAAGAGGAAAGAAAGCTACTTCTCAAAATCATTTCAATTGAAATGACTAAATAAAGCTGAAGACATGCC TCAATTATTCCACACCTCTGTTTTCTCAATTCTTTTTCCACTTTTTTTTTTTTAACCTATCTCTTCTTTTCTCTGTATAT TATTTATTAATTTTTTACTTTATCTTTTTTATTTCACTTTTCTTTTTACTTCTCTTCCCTGCATATCTTTCTCCCTTTTT TTCTTTTTCTTTTTCATCCGTCGGTGTCATTACACTCAAACCTATAATATATTCAGCCCCCTTTGGAATTCACTTTGCCC TCCCCCTAGTCGATAGTGAACTTTTCCCAAGATTCACCAGATGGAATATTAGGTTTTCTTTTTTTTTTCTCTGCTATATT TTTTTTTTACTCTTTTTTTCTCTACTTCCGCGGGAAACACCTTGCTCTAAACGAATAATGACACTCAGAAACTACTCATA AGAGTTTTAAAATCAATTATAAAAGGATTTTCACACATTAACCTAAACAAAGTGATTATAAGTGCACTTGATAACAGACA AAGTTGAATGTGTTGAATGACACCTTCTCTATATTCCCAACAAAGGAAGGTACTACTAATACATTAACATTACTATGCTA ATGCTACAATTAATCTGGGAACAATATACACAAGCATTTTTTTTTCTTTTTACAGATATATATTAAAGGTACAACAACTA CCACCTAAAAAACATGGTGACAGGGAATTTGTGACTTCGGCTCCAAAATACAATTTCCACTACACACACTCTGAATCTCT GCAGCTTTGATATTTCCTTATCCAAGTATCTCCATGGTGGTCAGAATCCCACTTAATTTAGTGACGCCTAATAATAATTA AATCGGTTGAAGCAAATGTTAGCTTATTGCTCCAGCTTGGTCAATTAGTGTGCCAACTTGTTCTCCACACAAAGCTTTTG AGATGTTCCCAGGTGCCAATAGATTAAAAACCACAACTGCACATTTAAATGGCAGCAAAATCCATCAAATAACTACGTAA TAAATTGTCTGCTTCCTCGGTGGCTTCAATAATCTCGTGCGTGTTTGTTTTACGGTCAAGTTAGCCAAAAGTACATTCAA ACTTCAAAGTGCCTATTTGAGACAACTTATAAAATGAAAACAATGTTGGGATACTCATAAACTTCAATATAAAAGCAAAA TGGCACCAAGGAGGCAGTGTCTAGGGATTCAAGTGTGCTACAGGACCTATTTGAGACCCACTGTAAGTGCAAGGCGCAAA TAGAAATGGCAATGCATATGTATTTCCTAAGCAAAGGAATAGTTGAAGCACCAAAGTCAGAAACACACCCATAAAAGGAC CAAATGCAACATACTAACCTGGAATAGCATTTTCCTCACAGAATGTCAGTGCTGACATATCCATAGAGGTGACTCCTCTC GATGCCAATTCCCTGAAGGATATATGCTCGAAAGTGAAATTGTTGTCTCGTGAGTTGCAGTCATATACGCCATCTACGTT GGTACCTTTGAGGACAGCCTGAGCATTAACTGCAAAGTAGAAGGAGAAAGATAATTAGATATATGCTAATGCTTACTAAA AAGAAAAAGTATGAAAAAAGATGGACGGGAGCATACGCTCTGAAGCACGAAGAGCTGCAGCAATGTCAGTTGAGAATAGG GGGTTGCCAGCACCTATACCAACACCGCCAAATATAACAACTCTTCCTTTCTCAAGATGTCTGATGGCCCGCTGCCTATT GTATGGTTCAGCAAACTCCTGCATGGCTAATGAAGTTTGTACACGAGTCTGAACACCCATCTTCTCTAGAGTTGATTGGA GCAATATTGAATTCATCACAGTTGCCATCATGCTGCGCTTAAGAAGCCACTATTCGTTCAGGTCAATGTTTTAAAGTAAA GTAGAAACAAAAGCAAATCACTTCAGAAAATATATTAACCAGGAAGATTAAGAAGATTTTATGGCAATACAAGTACGTAA CATATGGACTAAAACGCCAGAGAGGCGGCCCCAATATTAACCCATGTGCAAGGCATCAGGATGATACTTGCCTGAGCACA ATGGGAAGCCTACAAAGTCAAATAACATAAGTTGGAAGCACTTAAACTATTACAAAGGAAATAACTTTTATACGTAGTTC AATACAAATATATTCGTTAAAATCGAAAGTGCCCAAATTTGAATATGCAACTAAATGAAAGAAACTCAGAATAGCAACTA TAGGAAGGAGAAGAATGGGTTTATGCAAATCATAAGCAGAGGCACATCCAGTCAGAAGAGATAATAAACATAGACAAGAC ACAGGACAAATGAAATCCCTCCTAGGTGATTCTAACCGCGGTGGCCTTCTCTAGCAGTAGCACCACCAAGGAGCTCTCTC TCGCCCACATCACATTTTCGATTAGAAGTTCTCTTTTATTTTTTGGCTCGTCCATTAGTAATAACTAACAAGGGCACGGA TGCTGAGATCAAAATCCATTTTTCCATTTATTTTCTTTGTGTGAAAGACTACTAGTAAATTTTCAGTGGCATTATTAGAA TTTGCATTGAATTTTTAGTGATTAACCTTACCCAACTTGGTATGCAGTACATCTTTCTAAGCCTGTCGCAGTCACCCAAG CATCTCCACAGAAGAAATTACGACCTCCAACAACAATCACCACCTGAAATATCAAACAGAAAGACATAAGCTTCAGCTAA ACTGAAAGGGTGGCAGAATGCCAGAACCAGAAGACAATGAAGAGAATTGATACCTCGACGCCAAGGCGGGAAGCTATTGC AACTTCACTTGAAACTAACATGGCCACCTGACAATTAATTTCAACAAACAAGTGGAATAAGTTTCGTCATATGCAGAAAA CATTTAGACCCCTACTTGGAAAAGGCTAGGGTCACGAATCAAACAAAATAGTCAAATTTTCTCCATATGAATAACCATAG CACAACTGTTTTTCCATTTGAGCCGAGGTACATCCAAACCACAAACCTTAGGGTCAAGATTGCAGGTATCAGATCCAGTA AGAGCTGCTCCACTAATTTTGAGCACTACCCGCCGCCATCTAAGGTTTGACAATGCTTTGGACTTCATGCTGTTTACTTG ACCTCCACTGCTAGGCGTTGCTACTCCATATCTACAAATAAGGCAGTGGAAGGTTCAATATTCATAATATCACTAGAATA TGGACTAGAAAAAAGAAAAAAAAAAATCATATTGAATGGCATTCATCATGAAATAGTCCAAGTGCAACACAGTCCACATT CCACTCCACCCTGGTAATACCTATGGCATTAAACAATTCACTGATTAAGCTCAGAAGTAATTTGTGAACTAGAAGTATGC TAGCAGAGATTGCATGATGTTATTTGTAACAACAGCACTGAAGAAAATTGCAAATTTTCAGAATCAGTCAAACCCATCGT AGTACTAAGATTCCAACATCCTATTCTTCTGTATAACAAATAACATGACAAAGAGCCTATATCAGGTAATACTAAGATTC CATAAATTGTAACACGCTACACGCTGCACACCTGTAGTATAAAGCAATTCTACGAAGTTTTATATGTTTCAGGTTCCAAA TTGTTAGCATGTAAGAAATTAAGAGCCAGTTTGTATGAGCATTCACATGGCCTTAGACGCCCTTTTTTTCAGAATTGACA ATGTATAGCTGTTGGAGAAACGAGGGCATGGCAGGTTCAAACGTCTATACGAACAGGCACTAAGTAAAATGGTGAAAAAG CTGCTCAAATCAGAAACCAAGTGAACAAATTCTATGCATAACAAAGCACAGTTAAACCCATATATATATGTCATAAAGTA GTCAAATTTTCCAGAATCCTATCCTAAAGTCAGCAAATCTGTACCACAAAGTAATGTCATAAAGTTTCAATTATTATTAT TATTAAAATTATTATTCGAATCCATAAGCATATGAGTTAATTAAGCACTAAGTAAAACAGATTAAAAATGAACAAAACAA AGCAAGGAGAAGATAAGAGTGTGGAAAACCTCTTTGATTGTCTGGGTGAATTGGAAGCTGGAACAAGTGCTTTGTCCTCG TCGGAGAATTTGGTCGGAAGAGAATTTCCAACGATGTGTTCCATCTGCTTGAACCAAGGCCAGTGACTACTGGAGATGCA ACCATTGTTCATCCTATGCCTCTCCAGCTTATACCGCTTCTTCAGATTATCCACCTTGTTCTTACACTGCTCCACGCTCT TCGATTGATTCTCACACCGTTCACTCACCACCGCCGCAACCTCCTCCCAATCCCTCCCTCTCAGGTTCCCCCGATTCAGC TGCGTGAACTTCTCCGTGTACGCCTCAAGCAAGCACATAATCGCCGTATCGCTCCACTCCTCACGATCCTTCCGATACTC TGCACCGCCGCCGCCGGATCCGCACGTGGACGTCGACCTCGGCCTCTTGTTGAACGCGTACGGTGAAGTCCCTTCGCCGA TCTCGTCATGGTCCTTACGTTTCTCGCTCACGGCGTCGTCGTCGAACGGGTTTCCGTAATCCTCGGCGGCGGCGTCGTCG TCGACGTTGACGGGTTTCGGTTGGGAGGTGAAGTGGTGGTTGTGGTGATGAGGCGCGTAGGGTTGGTGGAGGTGGTGGTC GTGGTTGTCGTCACGGAGGAGTGAGAAATCGTCGTCGTCGTCGTCGCCGCAAGAGGCCATAAACGGCGTCGGAGACGTTA GGGAAAGAGATAGAGAGATGAGGGAGATGTGGTTGACGGAGCGTTTCTTCCGTGAGCAGATCTGGTATCTGCCGTCACGC GTGGTGACGGTCCCGTTAAGTGACAAGAGCGAGTGTACTGTACGCGCTTTCGCGAATGACGCGCCATACTCACCCAAACA TGTTTTGGGCCAATTGATGTTTCAGTTTGGTTTTTTTTTTTAAAGTGATCAAGGTTTTTGTTAACAAAAAAAAGTTATCA 

CDS sequence (LotjaGi5g1v0090000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAACCATGTCTTGTTCTTCTTGTTGTTCTTCTTCTTCCACTTGGTGTTACCATGTCTGTCGACACTGAGTCTCCACCA TAATGACACACATGCACTCACCCTCTTCCGCCGCCAAACTGACTCACACGGCCGCCTCCTCTCCAACTGGACAGGAGGCG ATGCCTGCGTCGCCGCCTGGCGCGGCGTCGCTTGCTCCCAAAACGGCCGAGTCACTTCCCTCTCCCTCCCTTCCCTCAAC CTCCGAGGACCCATCGACGCTCTCTCCCCTCTCTCCCACCTCCGCCTCCTCGACCTCCATGAAAACCGCCTCAACGGCAC GGTTTCCCCGTCGCTCCTCTCCAACTGCACCAACCTCAAGCTCCTCTACCTCGCCGGAAACGACTTCTCCGGCCACATCC CGCCGGAGATTTCCTCCCCGAAGTTCCTCCTCCGCGTCGATCTCTCTGACAACAACCTCGCCGGCGACCTCCCCGGAGAA GTTTCTCATCTCTCCAGCCTCCTCACCCTCCGCCTCCAGAACAACGCCCTCACCGGCCGCGTCCCCGACCTCTCCGCCGC CATGCCGAACCTCACAGAACTCAACTTGACCAACAACGAATTCTCCGGCCACGTACCCTCCTCCATGCTCAGCAAATTCG GCGAAGAAACATTCTCCGGCAACGAAGCTCTCTGCAGTGCCAGCGCCGGAACACTCCCTGCTTGCTCCACCGCCGACAAC CTCCCTTCTCATCCTCCTGTTCAAACCGTTCCTTCAAACCCGAGCCGGTTCCCGGAAACCAGCATAATCGCCAGACCGGG AACCAAACCACCGCGCAAGGGTTTAAGCCCCGGCGCCATCGTCGCCATAGTGGTGGCGAATCTCGTCGCGCTGCTAGTTG TAACTTCCTTCGTTGTAGCTCATTGCTGTGCCCGAGGAAACGGGTCCCACCCTAACTCCCTGGTGGGTCCCAGTGAGAAA CGGAAGAGTGGGAGCAGTTACGGCAGCGAGAAGAAGGTGTACGCGAGCGGCGACAGCGACGGAACCAGCGGCACGGAGAG GAGCAAGCTGGTGTTTTTCGACCGGAGGGGTGAGTTTGAATTGGAGGATCTTCTCCGTGCTTCGGCGGAGATGCTCGGGA AGGGTAGTTTGGGAACGGTTTATAGGGCGGTGCTTGATGATGGATCCACCGTTGCTGTGAAGAGGCTCAAGGATGCAAAT CCATGTGCTAGACATGAATTTGAACAGTATATGGATGTGATTGGGAAGCTTAAGCATCCAAACATTGTTAAGCTTAGAGC TTATTACTATGCTAAAGAAGAAAAGCTTCTTGTCTATGATTACCTCTCCAATGGAAGCCTACATGCTCTTCTTCATGGGA ATCGTGGTCCGGGGAGAATTCCGTTGGATTGGACTACTAGAGTGAGCTTGGCGTTAGGAGCGGCGAGAGGGTTGGCTCGG ATTCATGCGGAGTACAGCACGGCGAAAGTGCCTCATGGGAATGTGAAATCTTCCAATGTGCTTCTGGACAAGAATGGTGT GGCTTGCATCTCTGATTTCGGGTTGTCATTGCTGCTGAACCCGGTTCATGCGATTGCGAGATTGGGTGGTTATAGGGCAC CGGAACAGGCTGAGCAGAAGAGGCTTTCACAGCAAGCTGATGTGTATAGTTTTGGGGTGTTGTTGTTGGAAATTCTAACA GGGAGAGCTCCTAATTCATCATCACAGTATCCTTCCCCTGAGAAACAAGAAGCTAGTGTGGATCTTCCAAATTGGGTTCG CTCTGTTGTGAAGGAAGAGTGGACTGCGGAGGTGTTTGATCAAGAACTTTTGCGGTACAAGAACATTGAGGAAGAGCTTG TGTCAATGCTGCAAGTTGGGTTGGCTTGTGTAGTGCCGCTTCCGGAGAAGAGGCCAACCATGGCGGAGGTTGTGAAGATG GTTGAGGATATCAGGGTGGAGCAATCTCCTCTGGGGGAGGACTATGATGAATCGCGAAATTCGCTTTCGCCTTCAGTTCC AACCACTGAAGATGGTCTTGCTTAG 

Protein sequence (LotjaGi5g1v0090000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNHVLFFLLFFFFHLVLPCLSTLSLHHNDTHALTLFRRQTDSHGRLLSNWTGGDACVAAWRGVACSQNGRVTSLSLPSLN LRGPIDALSPLSHLRLLDLHENRLNGTVSPSLLSNCTNLKLLYLAGNDFSGHIPPEISSPKFLLRVDLSDNNLAGDLPGE VSHLSSLLTLRLQNNALTGRVPDLSAAMPNLTELNLTNNEFSGHVPSSMLSKFGEETFSGNEALCSASAGTLPACSTADN LPSHPPVQTVPSNPSRFPETSIIARPGTKPPRKGLSPGAIVAIVVANLVALLVVTSFVVAHCCARGNGSHPNSLVGPSEK RKSGSSYGSEKKVYASGDSDGTSGTERSKLVFFDRRGEFELEDLLRASAEMLGKGSLGTVYRAVLDDGSTVAVKRLKDAN PCARHEFEQYMDVIGKLKHPNIVKLRAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRVSLALGAARGLAR IHAEYSTAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQAEQKRLSQQADVYSFGVLLLEILT GRAPNSSSQYPSPEKQEASVDLPNWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLQVGLACVVPLPEKRPTMAEVVKM VEDIRVEQSPLGEDYDESRNSLSPSVPTTEDGLA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 21 21 -
Phobius 1 3 3 -
SignalP_EUK 1 18 18 -
TMHMM 4 26 23 -
Phobius 4 17 14 -
PANTHER 15 646 632 3.3E-175
PANTHER 15 646 632 3.3E-175
Phobius 18 21 4 -
Phobius 22 278 257 -
SUPERFAMILY 26 210 185 7.37E-33
Pfam 27 66 40 1.5E-5
Gene3D 27 140 114 7.5E-27
SMART 91 115 25 46.0
SMART 116 140 25 370.0
Gene3D 141 219 79 5.1E-15
SMART 164 187 24 60.0
SMART 188 212 25 21.0
MobiDBLite 241 272 32 -
TMHMM 278 300 23 -
Phobius 279 300 22 -
Phobius 301 674 374 -
MobiDBLite 309 344 36 -
MobiDBLite 311 344 34 -
Gene3D 342 441 100 1.4E-22
ProSiteProfiles 366 646 281 32.442
SUPERFAMILY 370 641 272 1.01E-61
Pfam 370 639 270 1.7E-34
CDD 372 644 273 3.97168E-89
Gene3D 442 662 221 9.1E-49
MobiDBLite 649 674 26 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0090000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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