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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0346900 |
| Transcript ID | LotjaGi5g1v0346900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein transport protein Sec24-like family; TAIR: AT3G44340.1 hypothetical protein; Swiss-Prot: sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF; TrEMBL-Plants: tr|A0A151TQ51|A0A151TQ51_CAJCA Protein transport protein Sec24-like family; Found in the gene: LotjaGi5g1v0346900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66312650..66321595) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAACTCCACGGGACTACCACTGCAATTTGGGTCCAGATGGTCGGCGTAGAGATGCTGATGAAAGGCCTGAGTTGTGC AGAGGAACAGTTGAGTTTGTTGCTACAAAAGAATTCATGGTAAGGATATTTGTAAAATATTCAAGGCTGGACTTTTGAGT GTATTTCTTTCATTGATTGTTCATCATTACAAGAATATCATTAGTTTACTTGACGAGTGGTTGGCAATTCACTATTTTCC GTAGGTCCGTGAGCCAATGCCGGCGGTGTACTTCTTCCTCATTGATGTATCAATGAATGCTGTTCAAACTGGTGCAACAG CTGCAGCTTGCAGTGCCATAAAACAAGTCATTACAGACCTTCCTGTGAGTTCTAACTGTAGACAACTTATTAACCATTTA TATATGATAATCTGTGTGATGCTTCATGCTTAATAATTTCCAAATTTTTCTGTTGTTTGATTGGATTGAAAGTTGAAACT CATTGCTTCATTATGATCCATTTTATGTTGGTACTTAGATACCAAGAGACTAAACCTTTAAGATTCCTCCCTCCTCTCTC CACCTGCCTCTGAAACAAATAATGAAATACAGATATAAAATTGCATAAATTGTTTGAAATGAATGGTGTAATTTTAAAAA ATAATTTCCCACTATGATGGTATGTACTCTTAATTATAATAGTGGTATTTCTTATTTATTGTGTGGGATCTTTATGTTTT TTGACTCCTTTTGGCAACCCTCTGTTCTGATTGTGACTTTATGGTCAATTATTTGGCTGAATTTCTATTTAGAGGCTTCC AAGAATTTTTTTAATTGTGTTGTGGCCAGATATTCTTGCAAATATCTCATTTTATTTTGACATGCACTATATAATTGAAA TTTTTGGGCATATTGCTACAGGAGGGTCCTCGCACACGGGTGGGAGTTGCAACATTTGATTCAACAATTCATTTCTACAA CTTGAAACGTGCATTACAGCAGGTATCACATAAGTCCACTACTAAACATATACTGTTTCTTGTTTTGGAAGAATTAGTTG CAAGTGCATGGTTTCATTCAGTTTAAATTAATTAGATTTTTGAAGCATTAGTTTTACATTTTCTGCTTTCATAGGGTGAA TGACAATGGGATTTTTGTGCTGCATTTAATTGATGTCTTGGAAACTGAGCAGTCATATTGGCATTGTTTGTATCAGTTTT TCTGTCTCAGAGTAGTGGAACTGGAAAGTGGAAACATTGGTTTTCTATTATTATTCGTTTGCCTTGATGTTTTAACTTGT GACTGTATTATGATTTTAAGGACATGAAAAATATTCCTTCGCCAATCCTAGATATAGTTATTTACAATTCTGAATAACTA GTTTAGATACCTAGCTCTAAGCTCTTTGTTTTCTTTCCAGTATTAAGTAGTTGAGTATCAGGCTGATTTTGGAATTTATA ATTTTGTAGCCACTGATGCTCATTGTTCCTGATGTCCAAGATGTTTATACTCCTTTGCAAACTGATGTAATTGTACCACT ATCTGAGGTTAGTTTCACATACTTTTCTGCTTGCAGAGTTTTAGTGGATAAATTGAGCTATATTTGGTCACTGTGTTTAC TTTATTCTATTCCTCTTATTGTTGGTTTAGCCATGTGGTTTTTCATTAACTGGTTTGCTTCTTTCATGGTTAGTGCCGTC AACACTTAGAATTGCTTTTGGAAAGCATTCCTACCATGTTCCAAAATAATAGAACCTCTGAATCTGCCTTTGGTGCTGCT ATCAAGGTATTGCATTTTGTTTTCAAGTTATAGTCATGACTTAATTTGCAATGCTTTATGTTATTTGCCAAGATAGCTAT ATGGATGATGTCGGCACCCCCCCCCCCCAATTCATATACTTTATTGTCTTTTTGGATTGTCTTTACTTTCTCCATACCAA TGCTCATTGGCAAAATTTTATCTCAAAAAGAAGGAAAGAGAATAAAACAGTAGCCATAACTAGAGTCTTTGATTTCTTCA TCTCAGCCTCCTTGCTGCATGAGGTTTTGTCCCTCTTCCTCCTAAAACGAACTAATGTTCCTTGTATCTACAATGTTGTT TCATAGGGTGTCTTTTTATGGTATGTGTTAGTGGAAGTTGAAGGGTTTATAAAGTTACATGGCTAGGTTTTTTGTATGGT TTCTGTTGAGATATTAGATATGTTTTAATATAATATGATAATATTAGATTGGAGATATAATTTGATAAGATCCGTTATAG TAGGTATCCGTATCATCATGTTATCATGTACTAGACAGGATTAAATTTGTAGATATAGACTAGAAAACCTATTGTTGAGA TAGACTTGAACACATGTCTATATATTGGACTTCTAAGTCATGTGTAATCCACATTACATAAGTCAAATTATCAATCAGAA AACAATCTTCCTTTCAAATTGGTTTACGGGATGCCTCATTGCTAGGGAGCCGCGTTAGAAACCAAGAAAAATAAAGAATA ATTTTATTGCTTGATTGTAAATGAACAAAACAGGGAGAGAGATCTTCTCCAAGGATGTCCCCCTTCATTAAAGGCTTGCC CCTTCACAACTGAGCACTCGCTTGGTTCTTTCTGAATACAGTGCCCTGACTGACTTCCCTACCCTTATTTACCCCTAGTT ATTTATGATCTAATTCCCTCTAACTGTCCAACTGTTCTCATTGTCCAAGTTTACTTCTTTGTCTTATCATTCTTCGAAGC AAATACCCTTCTTTGTAACATTACCTTTTGCATATCTATTCTCCTTGTTTGAAGGCCCCAAATTCTCATTCAATGATTAG ATGCCCCCCACCAGAATCCTTCCCTCCCTTTTAACCTTTTTCCCAATCATTTTCTCCTTGCTTCCTGGTTCCTACACACC TTTCATACATTGGCAAAGTTGTCAATTGTCATTGGTCAGGATAAGAGGTTGTGAAAGAAATAGGCAAAGAATGGTAGACT TTGATTGATGTGATATTTTCTGTCCCTGGGCCTGGGTCATGGAGAATCCAAGTTTGGAAGAGAAACAATGATTCTTCCCC TCCCACAAATTATTAACCCATTAACTGTCTCCCTCTACCTACTCTTCCTCTATTTATAACTTCTTAATTAATTAACTACT CCAACAACTCACAAGGGCTACTCTCAACTAACCGGGCCTAACTAACAAGGGATGTCCCACTTGATTTCTTGGACGCATCC TTATTTCTATTGTTATTGACTTACCTATTTGAGGGTCGGGTGCTAAATGGTTTTTACAGCCCAAATCTCTATTTTTGCTT TGGTTTTCTATTACCTACTACCCTTTCTAATTCTCTTGACATGTACTTCAGTAGCTGAGCCTGAGAGATTCCTTACAAGC TCTTGTGCACATTTACTGTCTTCTCACTGGGATTTACAGTTTGGCACATGTTCCTTCATCCTAGACAGATCATTATATGG ATATAAAAATGTCTTAAAGCTTATACTTTTTGTTTTCTCCTTTTAGGCGGCTTTCCTTGCAATGAAAGACACAGGAGGAA AGCTGTTGGTTTTCCAGTCAGGTGAGCTTCTTAGCTTGTATATTTCCTAATTTATTGATATTTATATGACATTATTGTTG CTATATATATCCTTAGTGGGCCATGGTGGATGAAACATCTAAACTATGTTATGCACGCATCTGCCTCATTTGTTACTTGA CAAATTCTATCATGTTTTATGACTTTAGCAAAAGTCAATATCTAAATATAATAAAAGTTACTGGTATGCAGTAAGATGCA AAATTTTGCAATACTGCAATTTAAGATTAAATAAAGAAATATTTTTTAACAATTTATCTGTTTTAGTAACAGGATTTGAT TATAAAAAATGAATGAAAACTGTTGCCGCACAAGATGTCCTTAGTAAATACCATTGACTTAATCAAAAGGCTTTTGTTGT CTTATTCATGCAATGGAATTTTACCACGTCCTGAAACAATAAATATTACATTTAGTGTTCCATGGACAGTATTTGTTTGG ACTTGGTGTTTGATCTTCATTATTATGTTTGGTTGGGTCTTTCTTCTAATTTTTTGGATATTTTCTGGTCATCACCTTGT TTTATCTTACTCCATTTCCTTGTTATTTTTTTCCTTTTCTCTGCAACTGTATTTGTGCTTTATTGTTTGGTTTATATTAT ATTTGGTGATTCTCATGTTTTTTTGTTCTCCAGTCTTGCCGTCTATAGGCATTGGTGCACTTTCTGCACGTGAGGCTGAA GGTAGAACAAACATTTCTGCTGGAGAAAAGGTAGATTCATCTCAATTTCTATCTGATAGTAGGAAATGTTTTTAAATTCT GTTATGGCCTTTCCTGGTCATAAGTTTGAGCTTGATAGATGGTGCCGTGGGATTAGTTCTCTATATTTGCAAATCCCATT TATTTAGTAGTGGAATTGGAAAGGAGACCAAATTCCATAGATGTAATATTTGACATGATTTATATCAAAAAAGTGTAAAA ATTCATCTGCATACTGTATAAAATCATCTGTGATTACTGATTCATCTGACTCTGCATTGCTTTATCTGTTCTGCCTCCTA ATAGTGTAGTGCAGATACTGATTTGTTGTGCATATAGTTTTTGCATATTCTTCAATTGAAATTCCTCTGTTGAATTTCAG GAAGCCCAGAAATTACTTCAACCCGCAGATAAAACATTCAAGGAACTGGCAGTTGAATTTGCTGAGTATCAGGTCAAACT TAGTTCTTTTGCTTGGGATCCAGGCTTTACTTTTGGTCCCGTTGAAGTTACTAGTTGGTTTTTCTTGTGAGCTTGTTTGA TGGTCAACTTGACATGGAGAATTTAAGTATAACTATTTTGTATTGCTGCAGGTTTGTGTTGATGTATTTGTGACTACTCA GACTTATGTAGACATGGCTTCCATATCTGCCATCCCACGAACTACTGGTGGACAGGTATTCATGAATGTATTATTTAAGT AAATGATTGAAGTATTAGCTTTAGTAGTATCTTATGATAAATGAGGTGAAGATCTTATCTGAGTTTTTTGTATACTTGGT CAAATATTTGTAGTAAGGATGAAGAAATGTTATTTTTTAGTCTGTTTTACTTATAAAACCTGTCTTTCTGAAAATAATGG AGATGCATTCAACCAATGCTGAAAATTTTGAATGGCAAGGCAATTGAGGAAAGGAGGAAGTGGTTGAATAACAAATCATA AATTCAATTGGCTAGCAGTTCTTGTATATCTGAAGAAAAGGCAGCATTAATAGACTGTAATAGTAAAGGATTTTGCAACA ATATCATATTTGCTAAGGCCTCTATAATTTTTCACTAGTCAATAGCTGATGCCACAACAAAATATTTATGATCTTTTTTA GAATGGAAATATTTACTAAATAATTTATAATGTGGTTGTTGTTTACTCTTTTAAACTTGTTACATTTATACTCTTTTACA GAAAGTATTTTACGTAAAATATGCTATACAAATAAATATATATGTTGCCTGCATTAAATTTTTAGATGCTGAACTTCGCA CTTTTTTCCCAGGTCTATTACTATTACCCATTCTCAGCTCTTTCTGATTCTGCAAAGCTTTACAATGATCTTAGATGGAA TATCACTAGACCACAAGGTTTCGAGGCTGTAATGCGTTTGAGATGTAGTCAGGTAGTCTGCTTGTTTCACTCTCTTTGCT ACCTTGTCATTCAACATGTTGATTCTATAATGTTTATTTGAATTTTTTTTTCAGGGCATCCAAGTACAGGAATACTATGG CAACTTCTGTAAACGCATCCCAACAGATGTTGACCTACCTGGGGTCTGTATATTGTTTCTAGATGTTAAATATGCCTATA TGCATGTCTTGTATGCAACCTTAAGCATGAGTTTTTCTTATCTGCAGATCGATTGTGACAAAACTTTCATGGTAACTTTG AAACATGATGATAAGTTGCAGGATGGATCAGAATGTGCTTTTCAGGTATTAGAGAATTTCACCGCTCTACTTTCCTGTTG TTCAAGATCTTCAGATCAGCTTATATTACTCTTGAAAACATTTCATCATTTTTTGTTCTAAAATATTTACTCTTTTTCTT TTATTCAGTGTGCTCTTCTTTACACAACTGTGCATGGCCAAAGAAGAATACGTGTCATAACTTTGTCGCTGCCTGTCACG AGTATGCTCAGTAATCTGTTTCGAGCAGCTGACTTGGATACTCAATTTTGCTGTTTCTTGAAGCATGGTATCTCATTTAT CCCTCAGTTACATTGCTGTTCTGATTATTCTGTTTTTTGACATTTGTGGCTGCCATTTATGGATTTTACTGTTAACAGCT CTATATTGAATTCGCTTAGCTTTCTGTTAGCTGTATATATTGTAGCAGTTTCTGTGGTGGGGTCTTCCTGTTCTTATTTT AAACAAGTGTCTTAACTCTTAATTATGTACTGATGAATTTTAACACTTTTTTTTTACTGCAGCTGCTACTGAGGTTCCAT CAAAGCCACTCCCACTTGTTCGGGAACAAGTGACGAATCTTTGCATCAATGCACTATTTTCATATCGTAAATTTTGTGCT ACAGTGTCCTCATCTGGCCAACTTATTCTTCCAGAGGCCCTTAAGCTTTTGCCCCTGTACACACTTGGTATGTGTGAATT CTAATGCATTTTATGCAAACGTTTTCTAATAAACAAATTTGTGGAGCTAAAAGTATTAATTGTCATAGTTAATTTATCTG TGTAACATGTCATCAAAATCCTTAAATTAAAATATACCCTTTAGAAGAATTTTCCTGCAATTTTATTGGTGATAATGTTC ATTGACTTTGCATTATTTTCCTTATTCTTGTCCCTATGTTGAAGTAAGGTCTTGTTTTAGCTGTGAATTGGGGATGACTT TAAAAGCTGATATTCATATGCTTGATTTGTCGATGGTCAATCTTGATTGTTGAAATTCAAAATGTTATTATCTGGCCTCT CTAAGAAAGCCTGTTCAAGTAGTGCTAATTTCATTTTTTTCATTTCTTTTTCAGCATTAACTAAGAGTACTGGGTTGCGA ACTGAAGCAAAGATAGATGAACGGTCATTTTGGATAAACTATGTGTCCTCTCTGTCTGCTCCATTAGCAATACCACTCGT GTATCCTAGGATGGTGGCTATCCATGATCTTGACTCAAAGGTATATTTATTAATCGTTAAATAAATATATATATATAATA TTATAGAGTTAAATATATATATAATATTATATATTTATGTAGTTATGAATGATTTTAATGTATGTAGTGCTTATTCAGAA TTGGATGATGTTTGGTATTTTGAGAATGGTGATTTAAAAAAAAAAAACATGAGCGTGCCTTACATATTATTTAGTTGATA TGATATTTTGTGAGCATAATAAGCTATGCGATGAAGAGGATAAATGGTAGGTTTTCTTATGGTCTTCATCTGTTCTGCAC CTGTGTCTATTATATTAACCCTGACCTTATATTTACATCTTGAGAATTTTATAAGTTTCAGGAGGATGAAGAATCTGTTA TTCCTTCCTTTCTTCCCCTTTCTAGTGAACACATCAGTGATGATGGAATATATCTTCTTGAGAACGGCCTTGATTGTTTG ATCTATATTGGAGACTCCGTAAATCCAGATATTATACGAAGACTGTTTGGTGTTGCTACAGTTGAAGAAATTCCTACTCT GGTAATTTCTAAGTTATCTTCTATCTCTCTCTCTCTCCTGTTGCCAATGTCTAATATCATCACATAATCTGTCAAACTTT ACTACTAGCCGTGGTTATTTTCTATGGAATTTCTATTTTTGAGAGCTGCAAACTGTAACTTAAGATCATTTTTCCATTTC TAGTACCATATTATTCACAACTAGCAATGCGAAGTTAACAGTTATGTTTTATCAGTTTGTATTGCAGCAACATGACAATC CACTATCAAAGAAGTTAAATGAAGTGATAAATGAGATACGCCGGCAAAGATGTTCCTACCTACGGTAAGCTTATTGTTTT GATAATCATCCATATTTGAAACACTGTTGAATAATTTACATGTCATGTGACTTAAATGAAGTGTAATAAGATAATATTTT AACTGTTATTGCAGGTTAAAGCTCTGCAGGAAAGGAGATCCATCAGGTCAGTACATTAGAATGATTGCTTAAACCCAATT GCTTAATGCACGCTGGATTTTTAAGCATTAGCATGAATAGATGAAAGTTAATTTAGAACATGAAACCACATGACATCATT CCCCAATCCTGTTGGCAAATTTTCATTTTATTCTCCATCTTTTGAAAAAGTTGATTGTTTCGAGTCTTCAGGGCCAGCCC AACCCTAAAGCAAGTGATGCCGCCAAAAAAAAAATTCTAATTACTTTAGGCCTCCAAAAATCTGATTTATTTATTTATTT TTTTTTTGTCTCAACGAAAGTTAGTATTAGAAGTAAGATTTCTTTATTAAAAAATAGGCACCTCATGTTACAACTCTGTC TTTTAATTAGTAACTTCCTTATTTCTAGTGGTCTTTTCAATCTATTAATTCTAGTATCCTAGTTGAAATTATGTTCTATA ACAATCAAACTTGGCCTAGGTGCTGCATTGTTTACTAAATTTATCAAAATAGGCTCATATCCAGAACCAATTACTTCATT ATTTGATTAGTTCTCATTTGGATGGTAACTTGGTATGCTAGACTAGTTTAGAATAGGAATTATTCAAATAGAAGAAAGAA CTCTAGAGACAATTTTTAATTATTCAAATAGAAGTAAGAACTCTAGAGACAGTTTTTATGGTGTAAATTGTTCGTAATTT TTTATTATTAATTTAACCTATCTTTCTATCTGTCAGGAATGTTGTTCTTTTCATATATCGTAGAAGACAAGAGCGCAGGC GGCTTCTCCTATGTAGAATTTCTTATCCATGTTCATAGGCAAATCCAGAATAAAATGGCGTCATAA
CDS sequence (LotjaGi5g1v0346900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGCGGTGTACTTCTTCCTCATTGATGTATCAATGAATGCTGTTCAAACTGGTGCAACAGCTGCAGCTTGCAGTGC CATAAAACAAGTCATTACAGACCTTCCTGAGGGTCCTCGCACACGGGTGGGAGTTGCAACATTTGATTCAACAATTCATT TCTACAACTTGAAACGTGCATTACAGCAGCCACTGATGCTCATTGTTCCTGATGTCCAAGATGTTTATACTCCTTTGCAA ACTGATGTAATTGTACCACTATCTGAGTGCCGTCAACACTTAGAATTGCTTTTGGAAAGCATTCCTACCATGTTCCAAAA TAATAGAACCTCTGAATCTGCCTTTGGTGCTGCTATCAAGGCGGCTTTCCTTGCAATGAAAGACACAGGAGGAAAGCTGT TGGTTTTCCAGTCAGTCTTGCCGTCTATAGGCATTGGTGCACTTTCTGCACGTGAGGCTGAAGGTAGAACAAACATTTCT GCTGGAGAAAAGGAAGCCCAGAAATTACTTCAACCCGCAGATAAAACATTCAAGGAACTGGCAGTTGAATTTGCTGAGTA TCAGGTTTGTGTTGATGTATTTGTGACTACTCAGACTTATGTAGACATGGCTTCCATATCTGCCATCCCACGAACTACTG GTGGACAGGTCTATTACTATTACCCATTCTCAGCTCTTTCTGATTCTGCAAAGCTTTACAATGATCTTAGATGGAATATC ACTAGACCACAAGGTTTCGAGGCTGTAATGCGTTTGAGATGTAGTCAGGGCATCCAAGTACAGGAATACTATGGCAACTT CTGTAAACGCATCCCAACAGATGTTGACCTACCTGGGATCGATTGTGACAAAACTTTCATGGTAACTTTGAAACATGATG ATAAGTTGCAGGATGGATCAGAATGTGCTTTTCAGTGTGCTCTTCTTTACACAACTGTGCATGGCCAAAGAAGAATACGT GTCATAACTTTGTCGCTGCCTGTCACGAGTATGCTCAGTAATCTGTTTCGAGCAGCTGACTTGGATACTCAATTTTGCTG TTTCTTGAAGCATGCTGCTACTGAGGTTCCATCAAAGCCACTCCCACTTGTTCGGGAACAAGTGACGAATCTTTGCATCA ATGCACTATTTTCATATCGTAAATTTTGTGCTACAGTGTCCTCATCTGGCCAACTTATTCTTCCAGAGGCCCTTAAGCTT TTGCCCCTGTACACACTTGCATTAACTAAGAGTACTGGGTTGCGAACTGAAGCAAAGATAGATGAACGGTCATTTTGGAT AAACTATGTGTCCTCTCTGTCTGCTCCATTAGCAATACCACTCGTGTATCCTAGGATGGTGGCTATCCATGATCTTGACT CAAAGGAGGATGAAGAATCTGTTATTCCTTCCTTTCTTCCCCTTTCTAGTGAACACATCAGTGATGATGGAATATATCTT CTTGAGAACGGCCTTGATTGTTTGATCTATATTGGAGACTCCGTAAATCCAGATATTATACGAAGACTGTTTGGTGTTGC TACAGTTGAAGAAATTCCTACTCTGCAACATGACAATCCACTATCAAAGAAGTTAAATGAAGTGATAAATGAGATACGCC GGCAAAGATGTTCCTACCTACGGTTAAAGCTCTGCAGGAAAGGAGATCCATCAGGAATGTTGTTCTTTTCATATATCGTA GAAGACAAGAGCGCAGGCGGCTTCTCCTATGTAGAATTTCTTATCCATGTTCATAGGCAAATCCAGAATAAAATGGCGTC ATAA
Protein sequence (LotjaGi5g1v0346900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPAVYFFLIDVSMNAVQTGATAAACSAIKQVITDLPEGPRTRVGVATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLQ TDVIVPLSECRQHLELLLESIPTMFQNNRTSESAFGAAIKAAFLAMKDTGGKLLVFQSVLPSIGIGALSAREAEGRTNIS AGEKEAQKLLQPADKTFKELAVEFAEYQVCVDVFVTTQTYVDMASISAIPRTTGGQVYYYYPFSALSDSAKLYNDLRWNI TRPQGFEAVMRLRCSQGIQVQEYYGNFCKRIPTDVDLPGIDCDKTFMVTLKHDDKLQDGSECAFQCALLYTTVHGQRRIR VITLSLPVTSMLSNLFRAADLDTQFCCFLKHAATEVPSKPLPLVREQVTNLCINALFSYRKFCATVSSSGQLILPEALKL LPLYTLALTKSTGLRTEAKIDERSFWINYVSSLSAPLAIPLVYPRMVAIHDLDSKEDEESVIPSFLPLSSEHISDDGIYL LENGLDCLIYIGDSVNPDIIRRLFGVATVEEIPTLQHDNPLSKKLNEVINEIRRQRCSYLRLKLCRKGDPSGMLFFSYIV EDKSAGGFSYVEFLIHVHRQIQNKMAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 244 | 244 | 2.89736E-113 | ||
| PANTHER | 1 | 583 | 583 | 0.0 | – | |
| PANTHER | 1 | 583 | 583 | 0.0 | – | |
| Pfam | 1 | 240 | 240 | 1.0E-79 | ||
| SUPERFAMILY | 2 | 242 | 241 | 1.21E-65 | ||
| Gene3D | 2 | 242 | 241 | 4.7E-214 | ||
| Gene3D | 243 | 328 | 86 | 4.7E-214 | – | |
| SUPERFAMILY | 244 | 338 | 95 | 1.1E-38 | – | |
| Pfam | 245 | 329 | 85 | 7.4E-22 | ||
| Gene3D | 329 | 580 | 252 | 4.7E-214 | – | |
| SUPERFAMILY | 340 | 443 | 104 | 7.85E-25 | ||
| Pfam | 340 | 436 | 97 | 2.7E-20 | ||
| Gene3D | 444 | 562 | 119 | 4.7E-214 | ||
| SUPERFAMILY | 444 | 582 | 139 | 5.75E-29 | ||
| Pfam | 460 | 520 | 61 | 4.4E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | ER to Golgi vesicle-mediated transport | The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi. | ||
| Cellular component | COPII vesicle coat | One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state. |
Expression pattern of LotjaGi5g1v0346900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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