Domain Predictions — View

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PF08033

Source: Pfam

Description

Sec23/Sec24 beta-sandwich domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 24

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0201099.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein SEC23-like isoform 1 [Glycine max] gi\|356540108\|ref\|XP_003538532.1\|	Domains G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR002035 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 PF00626 PF04811 PF04815 PF08033 PTHR11141 SSF53300 SSF81811 SSF81995 SSF82754 cd11287	19
Lj0g3v0203219.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein Sec24-like At4g32640-like [Glycine max] gi\|356534416\|ref\|XP_003535751.1\|	Domains G3DSA:3.40.50.410 IPR002035 IPR006895 IPR006896 IPR006900 IPR012990 PF04810 PF04811 PF04815 PF08033 PTHR13803 PTHR13803:SF4 SSF53300 SSF81811 SSF81995 SSF82919 cd01479 mobidb-lite	18
Lj0g3v0242929.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein SEC23-like isoform X1 [Cicer arietinum] gi\|502135229\|ref\|XP_004502262.1\|	Domains G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR002035 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR11141 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919	21
Lj0g3v0332229.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein SEC23-like isoform X1 [Cicer arietinum] gi\|502135095\|ref\|XP_004502219.1\|	Domains G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR002035 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 PF00626 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF4 SSF53300 SSF81811 SSF81995 SSF82754 cd11287	20
Lj0g3v0332229.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein SEC23-like isoform X1 [Cicer arietinum] gi\|502135095\|ref\|XP_004502219.1\|	Domains G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR002035 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 PF00626 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF4 SSF53300 SSF81811 SSF81995 SSF82754 cd11287	20
Lj0g3v0344259.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23 [Medicago truncatula] gi\|357513131\|ref\|XP_003626854.1\|	Domains G3DSA:2.60.40.1670 G3DSA:3.40.50.410 IPR002035 IPR006896 IPR012990 NON_CYTOPLASMIC_DOMAIN PF04811 PF08033 PTHR11141 PTHR11141:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53300 SSF81995 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	19
Lj1g3v4804040.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein Sec24-like At3g07100-like [Cicer arietinum] gi\|502113027\|ref\|XP_004494519.1\|	Domains G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR002035 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 PF04810 PF04811 PF04815 PF08033 PTHR13803 PTHR13803:SF11 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01479 mobidb-lite	22
Lj1g3v4830280.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein Sec23A-like [Glycine max] gi\|356572844\|ref\|XP_003554575.1\|	Domains G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR002035 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF6 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01468 cd11280 mobidb-lite	24
Lj4g3v2576080.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein Sec23A-like [Cicer arietinum] gi\|502135226\|ref\|XP_004502261.1\|	Domains G3DSA:2.60.40.1670 G3DSA:3.40.20.10 IPR006900 IPR007123 IPR012990 IPR029006 PF00626 PF04815 PF08033 PTHR11141 SSF81811 SSF81995 SSF82754 cd11287	14
Lj5g3v2241210.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein transport protein Sec24-like At4g32640-like [Glycine max] gi\|356534416\|ref\|XP_003535751.1\|	Domains G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR002035 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR13803 PTHR13803:SF4 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01479 mobidb-lite	23
LotjaGi1g1v0750200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein Sec24-like; TAIR: AT3G07100.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q9SFU0\|SC24A_ARATH Protein transport protein Sec24-like At3g07100; TrEMBL-Plants: tr\|I1NBN5\|I1NBN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0750200	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR041742 PF04810 PF04811 PF04815 PF08033 PTHR13803 PTHR13803:SF4 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01479 mobidb-lite	28
LotjaGi1g1v0750200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein Sec24-like; TAIR: AT3G07100.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q9SFU0\|SC24A_ARATH Protein transport protein Sec24-like At3g07100; TrEMBL-Plants: tr\|I1NBN5\|I1NBN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0750200	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR041742 PF04810 PF04811 PF04815 PF08033 PTHR13803 PTHR13803:SF4 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01479 mobidb-lite	28
LotjaGi1g1v0754600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23; TAIR: AT4G01810.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q0US25\|SEC23_PHANO Protein transport protein SEC23; TrEMBL-Plants: tr\|K7MZM9\|K7MZM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0754600	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR037364 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF6 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01468 cd11280 mobidb-lite	28
LotjaGi1g1v0754600.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23; TAIR: AT4G01810.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q0US25\|SEC23_PHANO Protein transport protein SEC23; TrEMBL-Plants: tr\|K7MZM9\|K7MZM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0754600	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR037364 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF6 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01468 cd11280 mobidb-lite	28
LotjaGi1g1v0754600.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23; TAIR: AT4G01810.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q0US25\|SEC23_PHANO Protein transport protein SEC23; TrEMBL-Plants: tr\|A0A151TXC4\|A0A151TXC4_CAJCA Protein transport protein Sec23A; Found in the gene: LotjaGi1g1v0754600	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR037364 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF6 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01468 cd11280 mobidb-lite	28
LotjaGi3g1v0268900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23; TAIR: AT2G21630.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q4PE39\|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr\|G7LEA6\|G7LEA6_MEDTR Protein transporter Sec23-like protein; Found in the gene: LotjaGi3g1v0268900	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR037364 IPR037550 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF2 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd11287	30
LotjaGi3g1v0268900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23; TAIR: AT2G21630.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q4PE39\|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr\|G7LEA6\|G7LEA6_MEDTR Protein transporter Sec23-like protein; Found in the gene: LotjaGi3g1v0268900	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR037364 IPR037550 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF2 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd11287	30
LotjaGi4g1v0368900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23; TAIR: AT1G05520.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q4PE39\|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr\|A0A1J7GI99\|A0A1J7GI99_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0368900	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR037364 IPR037550 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF23 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd11287	30
LotjaGi4g1v0368900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23; TAIR: AT1G05520.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q4PE39\|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr\|A0A1J7GI99\|A0A1J7GI99_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0368900	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR037364 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF23 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919	28
LotjaGi5g1v0346900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein Sec24-like family; TAIR: AT4G32640.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q9M081\|SC24B_ARATH Protein transport protein Sec24-like At4g32640; TrEMBL-Plants: tr\|A0A151TQ51\|A0A151TQ51_CAJCA Protein transport protein Sec24-like family; Found in the gene: LotjaGi5g1v0346900	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR041742 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR13803 PTHR13803:SF34 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01479 mobidb-lite	30
LotjaGi5g1v0346900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein Sec24-like family; TAIR: AT4G32640.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q9M081\|SC24B_ARATH Protein transport protein Sec24-like At4g32640; TrEMBL-Plants: tr\|A0A151TQ51\|A0A151TQ51_CAJCA Protein transport protein Sec24-like family; Found in the gene: LotjaGi5g1v0346900	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR041742 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR13803 PTHR13803:SF34 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd01479 mobidb-lite	30
LotjaGi5g1v0346900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein Sec24-like family; TAIR: AT3G44340.1 hypothetical protein; Swiss-Prot: sp\|Q9M291\|SC24C_ARATH Protein transport protein Sec24-like CEF; TrEMBL-Plants: tr\|A0A151TQ51\|A0A151TQ51_CAJCA Protein transport protein Sec24-like family; Found in the gene: LotjaGi5g1v0346900	Domains G3DSA:1.20.120.730 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 IPR036175 IPR036180 IPR036465 IPR041742 PF00626 PF04811 PF04815 PF08033 PTHR13803 PTHR13803:SF34 SSF53300 SSF81811 SSF81995 SSF82754 cd01479	24
LotjaGi6g1v0038800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23; TAIR: AT5G43670.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q4PE39\|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr\|G8A123\|G8A123_MEDTR Protein transporter Sec23-like protein; Found in the gene: LotjaGi6g1v0038800	Domains G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR037364 IPR037550 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF22 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd11287	30
LotjaGi6g1v0103600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein transport protein SEC23; TAIR: AT1G05520.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp\|Q4PE39\|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr\|G7JBC0\|G7JBC0_MEDTR Protein transporter Sec23-like protein; Found in the gene: LotjaGi6g1v0103600	Domains Coil G3DSA:1.20.120.730 G3DSA:2.30.30.380 G3DSA:2.60.40.1670 G3DSA:3.40.20.10 G3DSA:3.40.50.410 IPR006895 IPR006896 IPR006900 IPR007123 IPR012990 IPR029006 IPR036174 IPR036175 IPR036180 IPR036465 IPR037364 IPR037550 PF00626 PF04810 PF04811 PF04815 PF08033 PTHR11141 PTHR11141:SF20 SSF53300 SSF81811 SSF81995 SSF82754 SSF82919 cd11287	31

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd11287	CDD	1	4.17