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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0349400 |
| Transcript ID | LotjaGi5g1v0349400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone-lysine N-methyltransferase, H3 lysine-9 specific; TAIR: AT5G13960.1 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein; Swiss-Prot: sp|Q8GZB6|SUVH4_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; TrEMBL-Plants: tr|A0A0R0FUI7|A0A0R0FUI7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0349400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66488392..66491484) extracted from Lotus japonicus Gifu genome v1.2.
GAGAAAAAAAAAATTAAAAAAAAATATGATGAAATAGGAAATGGATCACCGGAAAAGGAAAACACCGTTTGACGATTCGC CATGATTTCCCAAATTCTCGGCAAACAACGTTTCACCTTTCCGAGAACAACGAAGCTATAAATCAAACTCACTCCAACGT TGTTCTCACCACACTCTCACTCTCTCTCTCTCTAAACCCTAAACCCTTTCTCTCTCTACTCTCATCATGGCTGTGGGTTC CATTCCGATTGCCAACGGCGCCGGCAGCGGCGGAGCTGATGTTCCGAGCTCCTCTGGGCTCAAAAACCCCGCCGTGAAGC CGCCAATGCCGCAGCGGAGAACCAGTCTTCGAATCCAAGCTCTGCAGATTGCCACTCAGGCTCGCCGCAACGCAGAGCTT GAACAAGACAAAGGGAAGAGACCCGCCGAGACGGTGGCTCCGGCGGCAGCTGCTAAGGTGAACAAGCGAGGCCGAGCTAG CAGCAAGGAGCAGAGTGTGGGTGAGGCAGAGGCAGAGGATGTTTCGGAGCAGCAGAGGAAGAGGAAGATGAAGATGAAGA TGAAGATGAAGATGAAGATGGTTGAGGGTGATGGAGACGATGTTTCGGTGGATTTGGGAAATGAGACTGATACTGACACC TGTTCCCCTCAGGTGAAGGAGACGATCAGGGTGTATACCAAGCACTACCTTCATTTTGTTCAGGAAGAGGAGAGGAGGTG TACTAAAGCGAAAGCTATTCGCGACGCGTTGAGGAAATCCGGGGAGCCTGTTCCGCCGGAAGCTTTGAAGATCACAATGT CGCGAGCTGATCTCAAAGCTATAACCCATATGAAGGAAAACAATGAGATATTGTTCCCTGAGAAACGAATCGGCGAAATT CCAGGTGTTCACGTTGGACATCAGTTCCATTCTCGAGCTGAAATGGTTGCTGTTGGTTTTCATAACCACTGGTTGAATGG CATTGATTTTATAGGCCAATCCTGTTCTAATGTCCACAGCAGCAGCAGCAGTGGCTACAAATTCCCGGTGGCTATCTCGG TTGTTATCTCCGGCATGTATGAGGATGATGTTGATCAAGCTGAAGAGGTTGTGTACACAGGTCAAGGTGGGAATGATCTG AATGGCGGTAAGCGGCAATTTCAGGATCAGAAGCTGGAGAGGGGTAATCTAGCATTGCAGAACTGTGTTAAGCAAGGTGT GCCTGTTAGGGTGACTCGTGGTCTGAGAATTGGGAAAGGGAAAAACTCTCCTAAAGTCTACATATATGATGGCTTATACA TGGTTACCAAAGATTGGATTGAGAAGGGAATTTCTGGATTTACAGTCTACAAGTTTAAGCTGAAGAGGCTTCAGGGACAG CCTGATCTAAGAACACAACAGGTTTATTTCACCAATGGGCGTGCACCTCAATCTGTGACACAGATACGAGGATTGGTCTG TGAAGATATAACTGGAGGTCAGGAAAAGATTCCTATTCCTGCTACAAATTTGGTTGATGATCCTCCTGTTCCACCAACAG GTTTCACTTATCTCAAGTCTCTGAGGCTTGCGAAGAATGTGAAGCTTCCTCCCCCGACTGCGGCCGGATGCAATTGCAAA GGCAATTGTGCTGAGTCAACTACCTGTGAATGTGCAATGCGTAACGGGGGTGATATAACCTATGTGTCTAAGGAGGGTGG CAGGTATGAAACAAAATTGGTGAATTATCAAATGTACTTTGTCTATTGTAATATTTAATGTCTTCTTTTGTATCTGTTGA TAGGTTGGTGGAAGCCAAGGATGTTGTCTTTGAGTGTGGTCCCAATTGTGGTTGTGGTCCCAATTGTCTCAACAGGACTT CTCAAAATGGCATCAAATATCGTCTTGAGGTTGTATATTGTATTGGTTTCATTACATCTTTGAGTTATTATTAAGTGTAG CTTCTAATGTGTCTTTGATGAAATTCTCACATAGGTTTTCCGCACGGCAAAGAAAGGTTGGGCTGTTCGATCCTGGGATT ACATACCTTCTGGAGCACCAATTTGTGAGTACACTGGAGTACTTGCAAGGACTGAAGATATAGACCGTGTGGAGGAAAAC AGTTATATTTTTGAGATTGATTGCTTGCAAACAATCAAAGAGATTGGTGTAAGAGAGAGGCGGTCAAAGAATGCTGCAGC TGCAGTTCCTGCAAACCTTTTGGATGACCAAGGTTCTGATAATGGCCCGGAGTTTTGTATTGATGCAGCTTCGACCGGAA ATATTTCTAGGTTCATTAACCACTGCTGTGAACCTAACCTGTTTGTTCAATGTGTTTTGAGCACACACCATGATTTGAGA TTGGCTAAAGTGATGCTTTTTGCTGCTGACAACATAGCCCCTTTGCAGGTAACTTCACTTTTCTATATATCCCTCTGTTT ATCAACTTTTGGATAGTCTTAACATATGGGTTGGGAATTGTTGGCTGCCTGGTTATGCATGAAATGGGGTTTTAACAAGT TTCCTGTAAATTGATAATAGTAGTCATTGTGGGTAGTGGGGTGTTCCTTATTTTCTTCTTCCTTTATCACATAATTTGCT AACTATAACCAAGGCTTTCCCTGCTTTATGCGACTAGAGTTAGGTACTTTTAATGTTGGGAGTGATAACTTATATGTGTG TGAATAGAGATAGGAGAGCTCATTTTTTTTGAGAGGGTGTATTCTGTTGTCACCATAGCCTTGAATTTGAATCTCTTTGG TTTCTTGCAGGAGCTGACATATGACTATGGCTATGAGCTTGATAGTGTCATGGGCCCTGACGGCAAGATAGTGCAGATGC CATGCTATTGTGGAGCCCCAAACTGCAGGAAGCGATTGTATTAAATCTCAATTTTCTCTTTTTTTGATATAAGTTGTGTA CTTGATGCAAAGCTAGGTTGCAGCTTTGCATATTTTTTGTTGCTCATCAAAACTTTGGGTCTCATTTCCCCTTTTTTGAT ATAAGTTGTGGACTTCATGCAAAGCTAGATTGCAGCTTTGCATATTTTTTGTTGTTCATCAAAACTTTGGGTCACCTTAA ACTTGAGGTGCAAATAAAGGAATGAAGAAGCTACATTGATGAATTGATTACAG
CDS sequence (LotjaGi5g1v0349400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGGGTTCCATTCCGATTGCCAACGGCGCCGGCAGCGGCGGAGCTGATGTTCCGAGCTCCTCTGGGCTCAAAAA CCCCGCCGTGAAGCCGCCAATGCCGCAGCGGAGAACCAGTCTTCGAATCCAAGCTCTGCAGATTGCCACTCAGGCTCGCC GCAACGCAGAGCTTGAACAAGACAAAGGGAAGAGACCCGCCGAGACGGTGGCTCCGGCGGCAGCTGCTAAGGTGAACAAG CGAGGCCGAGCTAGCAGCAAGGAGCAGAGTGTGGGTGAGGCAGAGGCAGAGGATGTTTCGGAGCAGCAGAGGAAGAGGAA GATGAAGATGAAGATGAAGATGAAGATGAAGATGGTTGAGGGTGATGGAGACGATGTTTCGGTGGATTTGGGAAATGAGA CTGATACTGACACCTGTTCCCCTCAGGTGAAGGAGACGATCAGGGTGTATACCAAGCACTACCTTCATTTTGTTCAGGAA GAGGAGAGGAGGTGTACTAAAGCGAAAGCTATTCGCGACGCGTTGAGGAAATCCGGGGAGCCTGTTCCGCCGGAAGCTTT GAAGATCACAATGTCGCGAGCTGATCTCAAAGCTATAACCCATATGAAGGAAAACAATGAGATATTGTTCCCTGAGAAAC GAATCGGCGAAATTCCAGGTGTTCACGTTGGACATCAGTTCCATTCTCGAGCTGAAATGGTTGCTGTTGGTTTTCATAAC CACTGGTTGAATGGCATTGATTTTATAGGCCAATCCTGTTCTAATGTCCACAGCAGCAGCAGCAGTGGCTACAAATTCCC GGTGGCTATCTCGGTTGTTATCTCCGGCATGTATGAGGATGATGTTGATCAAGCTGAAGAGGTTGTGTACACAGGTCAAG GTGGGAATGATCTGAATGGCGGTAAGCGGCAATTTCAGGATCAGAAGCTGGAGAGGGGTAATCTAGCATTGCAGAACTGT GTTAAGCAAGGTGTGCCTGTTAGGGTGACTCGTGGTCTGAGAATTGGGAAAGGGAAAAACTCTCCTAAAGTCTACATATA TGATGGCTTATACATGGTTACCAAAGATTGGATTGAGAAGGGAATTTCTGGATTTACAGTCTACAAGTTTAAGCTGAAGA GGCTTCAGGGACAGCCTGATCTAAGAACACAACAGGTTTATTTCACCAATGGGCGTGCACCTCAATCTGTGACACAGATA CGAGGATTGGTCTGTGAAGATATAACTGGAGGTCAGGAAAAGATTCCTATTCCTGCTACAAATTTGGTTGATGATCCTCC TGTTCCACCAACAGGTTTCACTTATCTCAAGTCTCTGAGGCTTGCGAAGAATGTGAAGCTTCCTCCCCCGACTGCGGCCG GATGCAATTGCAAAGGCAATTGTGCTGAGTCAACTACCTGTGAATGTGCAATGCGTAACGGGGGTGATATAACCTATGTG TCTAAGGAGGGTGGCAGGTTGGTGGAAGCCAAGGATGTTGTCTTTGAGTGTGGTCCCAATTGTGGTTGTGGTCCCAATTG TCTCAACAGGACTTCTCAAAATGGCATCAAATATCGTCTTGAGGTTTTCCGCACGGCAAAGAAAGGTTGGGCTGTTCGAT CCTGGGATTACATACCTTCTGGAGCACCAATTTGTGAGTACACTGGAGTACTTGCAAGGACTGAAGATATAGACCGTGTG GAGGAAAACAGTTATATTTTTGAGATTGATTGCTTGCAAACAATCAAAGAGATTGGTGTAAGAGAGAGGCGGTCAAAGAA TGCTGCAGCTGCAGTTCCTGCAAACCTTTTGGATGACCAAGGTTCTGATAATGGCCCGGAGTTTTGTATTGATGCAGCTT CGACCGGAAATATTTCTAGGTTCATTAACCACTGCTGTGAACCTAACCTGTTTGTTCAATGTGTTTTGAGCACACACCAT GATTTGAGATTGGCTAAAGTGATGCTTTTTGCTGCTGACAACATAGCCCCTTTGCAGGAGCTGACATATGACTATGGCTA TGAGCTTGATAGTGTCATGGGCCCTGACGGCAAGATAGTGCAGATGCCATGCTATTGTGGAGCCCCAAACTGCAGGAAGC GATTGTATTAA
Protein sequence (LotjaGi5g1v0349400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVGSIPIANGAGSGGADVPSSSGLKNPAVKPPMPQRRTSLRIQALQIATQARRNAELEQDKGKRPAETVAPAAAAKVNK RGRASSKEQSVGEAEAEDVSEQQRKRKMKMKMKMKMKMVEGDGDDVSVDLGNETDTDTCSPQVKETIRVYTKHYLHFVQE EERRCTKAKAIRDALRKSGEPVPPEALKITMSRADLKAITHMKENNEILFPEKRIGEIPGVHVGHQFHSRAEMVAVGFHN HWLNGIDFIGQSCSNVHSSSSSGYKFPVAISVVISGMYEDDVDQAEEVVYTGQGGNDLNGGKRQFQDQKLERGNLALQNC VKQGVPVRVTRGLRIGKGKNSPKVYIYDGLYMVTKDWIEKGISGFTVYKFKLKRLQGQPDLRTQQVYFTNGRAPQSVTQI RGLVCEDITGGQEKIPIPATNLVDDPPVPPTGFTYLKSLRLAKNVKLPPPTAAGCNCKGNCAESTTCECAMRNGGDITYV SKEGGRLVEAKDVVFECGPNCGCGPNCLNRTSQNGIKYRLEVFRTAKKGWAVRSWDYIPSGAPICEYTGVLARTEDIDRV EENSYIFEIDCLQTIKEIGVRERRSKNAAAAVPANLLDDQGSDNGPEFCIDAASTGNISRFINHCCEPNLFVQCVLSTHH DLRLAKVMLFAADNIAPLQELTYDYGYELDSVMGPDGKIVQMPCYCGAPNCRKRLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 104 | 104 | - | – | |
| MobiDBLite | 40 | 54 | 15 | - | – | |
| ProSiteProfiles | 46 | 696 | 651 | 156.429 | ||
| PANTHER | 79 | 696 | 618 | 1.2E-253 | – | |
| PANTHER | 79 | 696 | 618 | 1.2E-253 | – | |
| MobiDBLite | 81 | 104 | 24 | - | – | |
| Gene3D | 127 | 380 | 254 | 7.5E-68 | ||
| Coils | 158 | 178 | 21 | - | – | |
| SUPERFAMILY | 198 | 393 | 196 | 3.98E-59 | ||
| SMART | 211 | 378 | 168 | 2.7E-55 | ||
| Pfam | 214 | 378 | 165 | 5.7E-49 | ||
| ProSiteProfiles | 216 | 374 | 159 | 50.846 | ||
| SUPERFAMILY | 401 | 673 | 273 | 2.22E-67 | – | |
| SMART | 405 | 502 | 98 | 2.4E-18 | ||
| Pfam | 409 | 510 | 102 | 4.3E-19 | ||
| ProSiteProfiles | 453 | 515 | 63 | 11.411 | ||
| SMART | 518 | 672 | 155 | 1.7E-36 | ||
| ProSiteProfiles | 518 | 666 | 149 | 16.587 | ||
| Pfam | 529 | 666 | 138 | 6.3E-17 | ||
| SMART | 680 | 696 | 17 | 2.0E-4 | ||
| ProSiteProfiles | 680 | 696 | 17 | 9.74 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Biological process | Histone methylation | The modification of histones by addition of methyl groups. | ||
| Molecular function | Histone-lysine N-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives. | ||
| Biological process | Histone lysine methylation | The modification of a histone by addition of one or more methyl groups to a lysine residue. |
Expression pattern of LotjaGi5g1v0349400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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