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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0044900 |
| Transcript ID | LotjaGi6g1v0044900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT5G58300.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300; TrEMBL-Plants: tr|K7LR64|K7LR64_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0044900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:8418569..8420848) extracted from Lotus japonicus Gifu genome v1.2.
ACTGACATGTTGCCATTGCATTTAATTTATTTTACAGACTATGTTTGTTTGATATTATTTATTTCTTGATGCTGATGGAT CCTGACTATGATTTATGTTCATGGTGCTAAACCAGGAAAATATGAAGGCCAACAAAGTTTACACCCACTCTAATTGTCAA TATCCAATTCCTTTAAGCAAGCTACCCTCCATGAACTTCTATTCTACTTCAGCGGCTTATTTCCTTTTTGTCATGATTAT TCATTTTACTGTGGCTTCTTCTGACCTAAGTTCAGATAAGCAAGCTCTTCTTGATTTCGCTAATGCTGTGCCTCACGGTC GGAACCTTATGTGGAATCCGTCCACCTCTGTCTGTACATCTTGGGTAGGCATCACTTGCAATCAAGATGGAACTCGTGTT ATTTATGTCCGGCTCCCTGGAGTTGGACTAATTGGCTCTATCCCATCTAACACACTTGGCAAGCTTGATGCGGTGAAAAT TATTAGCCTTCGCTCCAATCTACTCAGTGGTAATTTGCCTGCTGACATTGCTTCTCTTCCTTCTCTCCAGTATCTCTACC TTCAAAATAATGACCTTTCTGGTGATATACCTGCCTCATTGTCACCCCAACTAATTGTACTTGATTTGTCATATAATTCC TTCACCGGTGGCATTCCAAAGACCCTACAAAATTTGACAGAATTAAATAGTTTGAATCTCCAGAACAACTCCCTATCTGG ACAGATACCAAATCTCAATGTTACCAACCTCAGGCATTTGAATTTAGGCTACAACAAATTGAATGGCTCTATTCCTAAAG CTCTTCAGAATTTTGCTAGTTCGTCATTTGAAGGAAACTCTCATTTATGCGGTCTGCCTCTAAAGCCATGCTCTGTGATT CCCCTGACACCTCCTGCTCCATCACCAGCTCCTGGAAGACCAAGCTCCAAAAATAAATTGAGTAAAGTAGCTATCATTGC AATTGCTGTTGGAGGAGGTGTGCTGCTATTTTTTGTAGTTCTTGTGATTGTTCTTTGCTGTTTAAAGAAGGACGTTGACA GGGGTTCTGACGAAATTAAAGCCAAAGGTCCTAGCGGTGGCAGGGGTGAGAAGCCAAAAGAAGAGTTTGGGAGCGGGGTG CAAGAACCTGAGAAGAACAAGTTGGTTTTCTTCGAGGGCAGTTCTTATAATTTTGATCTTGAGGATTTGCTGAGAGCTTC AGCCGAAGTTCTTGGAAAGGGTAGCTATGGCACTGCATATAAGGCTATATTGGAGGAGTCAATGACAGTTGTGGTGAAAA GGTTGAAAGAAGTTGTGGTAGGCAAGAAGGACTTTGAACAGCAGATGGAGATTACGGGAAGGGTTGGACAGCACGCAAAT GTTGTGCCGCTTCGTGCTTACTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTATGTCCCAGCTGGAAACCTATC GTCTCTCTTGCATGGTATGCATTTCTTTTCTTATTAGCAGTTTCAGTTAAATCTTCTGGAAGTAAAGTTTTGTTTGTTGG TACAAAAACTTGTTTTATTTTGATCCTTTTGTGGGCTTCTTTGATTTCTTTTAAGATCATTCATATGTTTGAAGTCCTAG ACCATCCAAACACTTCACTTCCCCTTACATTGGATCTCAATTTGATTACAGGCAGCCGGACAGGTGGAAGAACACCGTTA GATTGGGACTCCCGAGTAAAAATTTCCCTGGGAACTGCCAGAGGAATTGCTCACATCCATTCTGTTGGTGGTCCCAAATT CACCCTTGGAAACATTAAGTCCTCAAATGTCCTCCTCAGCCAAGATAATGATGGCTGCATTTCTGACTTTGGCCTGACCC CGCTTATGAATGTTCCTGCAACCCCTTCTAGAGTTGCAGGTTATCGCGCTCCTGAGGTGATTGAAACGCGCAAGCACTCT CATAAATCAGACGTGTACAGCTTTGGCGTCCTCCTTCTGGAAATGCTTACCGGGAAGGCTCCTCTGCAATCTCCAGGCCG CGATGATATGGTTGATCTCCCCAGGTGGGTTCAGTCTGTTGTTAGGGAGGAGTGGACAGCTGAGGTTTTCGATGTGGAGC TAATGAAATACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGTGTAGCGAAGATGCCAGAT ATGAGACCGAGCATGGATGAAGTAGTGAGAATGATTGAAGAGATCCGGCAATCTGACTCAGAGAACCGACCATCTTCAGA AGAGAATAAATCTAAAGACTCAAATGTCCAAACTCCATAG
CDS sequence (LotjaGi6g1v0044900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCATGGTGCTAAACCAGGAAAATATGAAGGCCAACAAAGTTTACACCCACTCTAATTGTCAATATCCAATTCCTTT AAGCAAGCTACCCTCCATGAACTTCTATTCTACTTCAGCGGCTTATTTCCTTTTTGTCATGATTATTCATTTTACTGTGG CTTCTTCTGACCTAAGTTCAGATAAGCAAGCTCTTCTTGATTTCGCTAATGCTGTGCCTCACGGTCGGAACCTTATGTGG AATCCGTCCACCTCTGTCTGTACATCTTGGGTAGGCATCACTTGCAATCAAGATGGAACTCGTGTTATTTATGTCCGGCT CCCTGGAGTTGGACTAATTGGCTCTATCCCATCTAACACACTTGGCAAGCTTGATGCGGTGAAAATTATTAGCCTTCGCT CCAATCTACTCAGTGGTAATTTGCCTGCTGACATTGCTTCTCTTCCTTCTCTCCAGTATCTCTACCTTCAAAATAATGAC CTTTCTGGTGATATACCTGCCTCATTGTCACCCCAACTAATTGTACTTGATTTGTCATATAATTCCTTCACCGGTGGCAT TCCAAAGACCCTACAAAATTTGACAGAATTAAATAGTTTGAATCTCCAGAACAACTCCCTATCTGGACAGATACCAAATC TCAATGTTACCAACCTCAGGCATTTGAATTTAGGCTACAACAAATTGAATGGCTCTATTCCTAAAGCTCTTCAGAATTTT GCTAGTTCGTCATTTGAAGGAAACTCTCATTTATGCGGTCTGCCTCTAAAGCCATGCTCTGTGATTCCCCTGACACCTCC TGCTCCATCACCAGCTCCTGGAAGACCAAGCTCCAAAAATAAATTGAGTAAAGTAGCTATCATTGCAATTGCTGTTGGAG GAGGTGTGCTGCTATTTTTTGTAGTTCTTGTGATTGTTCTTTGCTGTTTAAAGAAGGACGTTGACAGGGGTTCTGACGAA ATTAAAGCCAAAGGTCCTAGCGGTGGCAGGGGTGAGAAGCCAAAAGAAGAGTTTGGGAGCGGGGTGCAAGAACCTGAGAA GAACAAGTTGGTTTTCTTCGAGGGCAGTTCTTATAATTTTGATCTTGAGGATTTGCTGAGAGCTTCAGCCGAAGTTCTTG GAAAGGGTAGCTATGGCACTGCATATAAGGCTATATTGGAGGAGTCAATGACAGTTGTGGTGAAAAGGTTGAAAGAAGTT GTGGTAGGCAAGAAGGACTTTGAACAGCAGATGGAGATTACGGGAAGGGTTGGACAGCACGCAAATGTTGTGCCGCTTCG TGCTTACTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTATGTCCCAGCTGGAAACCTATCGTCTCTCTTGCATG GCAGCCGGACAGGTGGAAGAACACCGTTAGATTGGGACTCCCGAGTAAAAATTTCCCTGGGAACTGCCAGAGGAATTGCT CACATCCATTCTGTTGGTGGTCCCAAATTCACCCTTGGAAACATTAAGTCCTCAAATGTCCTCCTCAGCCAAGATAATGA TGGCTGCATTTCTGACTTTGGCCTGACCCCGCTTATGAATGTTCCTGCAACCCCTTCTAGAGTTGCAGGTTATCGCGCTC CTGAGGTGATTGAAACGCGCAAGCACTCTCATAAATCAGACGTGTACAGCTTTGGCGTCCTCCTTCTGGAAATGCTTACC GGGAAGGCTCCTCTGCAATCTCCAGGCCGCGATGATATGGTTGATCTCCCCAGGTGGGTTCAGTCTGTTGTTAGGGAGGA GTGGACAGCTGAGGTTTTCGATGTGGAGCTAATGAAATACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTG CCATGGCCTGTGTAGCGAAGATGCCAGATATGAGACCGAGCATGGATGAAGTAGTGAGAATGATTGAAGAGATCCGGCAA TCTGACTCAGAGAACCGACCATCTTCAGAAGAGAATAAATCTAAAGACTCAAATGTCCAAACTCCATAG
Protein sequence (LotjaGi6g1v0044900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFMVLNQENMKANKVYTHSNCQYPIPLSKLPSMNFYSTSAAYFLFVMIIHFTVASSDLSSDKQALLDFANAVPHGRNLMW NPSTSVCTSWVGITCNQDGTRVIYVRLPGVGLIGSIPSNTLGKLDAVKIISLRSNLLSGNLPADIASLPSLQYLYLQNND LSGDIPASLSPQLIVLDLSYNSFTGGIPKTLQNLTELNSLNLQNNSLSGQIPNLNVTNLRHLNLGYNKLNGSIPKALQNF ASSSFEGNSHLCGLPLKPCSVIPLTPPAPSPAPGRPSSKNKLSKVAIIAIAVGGGVLLFFVVLVIVLCCLKKDVDRGSDE IKAKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEV VVGKKDFEQQMEITGRVGQHANVVPLRAYYYSKDEKLLVYDYVPAGNLSSLLHGSRTGGRTPLDWDSRVKISLGTARGIA HIHSVGGPKFTLGNIKSSNVLLSQDNDGCISDFGLTPLMNVPATPSRVAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT GKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMKYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEVVRMIEEIRQ SDSENRPSSEENKSKDSNVQTP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | - | – | |
| PANTHER | 30 | 647 | 618 | 0.0 | – | |
| PANTHER | 30 | 647 | 618 | 0.0 | – | |
| TMHMM | 32 | 54 | 23 | - | – | |
| Phobius | 33 | 53 | 21 | - | – | |
| Gene3D | 53 | 214 | 162 | 4.0E-40 | ||
| Phobius | 54 | 284 | 231 | - | – | |
| Pfam | 59 | 96 | 38 | 1.6E-8 | ||
| SUPERFAMILY | 60 | 259 | 200 | 5.29E-31 | – | |
| Pfam | 113 | 161 | 49 | 5.9E-7 | ||
| Pfam | 173 | 194 | 22 | 0.12 | ||
| Gene3D | 215 | 260 | 46 | 1.3E-7 | ||
| Pfam | 218 | 240 | 23 | 0.04 | ||
| Phobius | 285 | 307 | 23 | - | – | |
| TMHMM | 285 | 307 | 23 | - | – | |
| Phobius | 308 | 662 | 355 | - | – | |
| MobiDBLite | 320 | 342 | 23 | - | – | |
| Gene3D | 336 | 442 | 107 | 3.6E-19 | – | |
| ProSiteProfiles | 367 | 662 | 296 | 31.185 | ||
| Pfam | 370 | 633 | 264 | 1.2E-35 | ||
| SUPERFAMILY | 371 | 645 | 275 | 1.91E-58 | ||
| ProSitePatterns | 373 | 404 | 32 | - | ||
| CDD | 373 | 638 | 266 | 6.98317E-86 | – | |
| Gene3D | 443 | 661 | 219 | 4.1E-48 | – | |
| MobiDBLite | 636 | 662 | 27 | - | – | |
| MobiDBLite | 636 | 653 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0044900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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