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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0052800 |
| Transcript ID | LotjaGi6g1v0052800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT3G53380.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LFH9|LRK81_ARATH L-type lectin-domain containing receptor kinase VIII.1; TrEMBL-Plants: tr|A0A0S3S5S3|A0A0S3S5S3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0052800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:9428809..9431404) extracted from Lotus japonicus Gifu genome v1.2.
GTTCTCTCTGAGTCTATAGAAAGTGAAAGAAATAACCGTTGTGAGAGCAAGAAACTATGCCTGCAATGGTGCTATCCACC TGTTTTCTCCACTTCCCCGTTTGGAATTTTCTGCCATGCTTTCCATCATTGCTTCTAAAATTCAAAGCCAAACAAACATA AGTACATAACAATAACATAGCAAAAACATTAACTCATCTTTCTCTTACAACCTGCGAATGTGAAGCAGAAAATCTATCTT ATATTCTTATTCTTAACCTTTCCATCCATCCATCACTCTCACTGTTTCCTTAACAATTCACCAATGCCATCATCACTTCC CATGATCTCCATCATCGTCTTCTTCTTCTTCGCCGGCGCCGCCACACAATTCGACTTCGCGACCATAACATTGAGCACAC TCAAGCTTCTCGGCGATGCTCACCTCACCAGTAACAACACCATCAGCCTCACTGGCGACCCTGCTGTCCCCAATTCCGCC GCCGGCAGGGCACTCTACTCCACCCCGGTCAGATTCCGGCAGCCGGGGAGCCTCCTCCCGGCGAGCTTCACCACCTTCTT CTCCTTCTCCGTCACCAACCTCAACCCCTCATCCGTCGGCGGCGGCCTCGCCTTCCTCATCTCGCCAGACGCCGCCGCCG TTGGCGACCCCGGCGGGTTCCTCGGCCTCGGCGGCTCATCTTCCTCCTTCCTCGCCGTGGAATTCGACACCCTCATGGAT GTTGACCTTCATGACATTAACGGGAACCATGTCGGGTTGGACCTCAACACCGTCGTTTCCACCCAGGTTGGTGATTTGGG GACCATCGGAATCGATCTCAAGAGCGGTGACTCGGTGAACGCGTGGATTGAGTACGATGCGAGGAGCAAAGGGTTTCGCG TTTGGGTCTCGTACTCCAATGTGAAGCCCAGGGATCCGATTCTGAAGGTGGATCTTGATGTGGGTCAGTACGTGAATGAG TTCATGTTCGTGGGGTTTTCTGGGTCAACACAGGGAAGCACAGAGGTTCACAATGTGGAGTGGTGGAGTTTCACCTCCAC CTTTGATTCTACGGCGGCGCCGTCGTTGCCTCCGTCTGCTCCACAAAAGGAGAGGAAATCCTCTTCTTGCCACAGTGGGT TGTGTAAGCAGGGAATGGGAGCGGTTGCTGGTGTTGTCACTGCTAGTGCTTTTGCTCTTGCTCTGTTTGCAGGTGCATTG ATTTGGGTGTATTCCAAGAAGGTGAAGAGGCGTGAGTCACTTGAGTCAGAAATCATCAAAACCCCTAAAGAGTTTGCTTA TAAGGATCTCAAATTGGCCACTAGGGGCTTCAGTGCTAATAGGATTATTGGTCATGGTGCCTTTGGGACTGTGTATAAAG GAGTATTGCCAGAGAGTGGTGACATTGTTGCTGTGAAGCGGTGTAACCATGGTGGTCAGGGGAAGAATGAGTTTTTGTCT GAATTGTCCATAATTGGAAGTCTCCGGCATCGGAATCTTGTTCGGCTTCAAGGTTGGTGCCATGAAAGAGGTGAAATTTT GTTAGTCTATGACTTGATGCCAAATGGGAGTCTAGATAAGGCTTTGTATGAGGCCAGAACACCTTTACCATGGCCTCACA GGCTCAAGATTCTGTTAGGTGTGTCAACTGTTTTGGCCTACTTGCATCATGAGTGTGAAAATCAGGTGATTCACAGGGAC ATTAAGACTAGCAATATAATGCTAGATGAAGGATTCAATGCTAGGTTAGGTGATTTCGGATTAGCGAGGCAAACGGAGCA TGACAAGTCCCCTGATGCAACCGTGGCTGCTGGCACAATGGGGTACCTGGCTCCTGAGTATGTCCTCACAGGTAGAGCCA CTGAGAAAACTGATGTGTTCAGTTTTGGTGCTGTGGTTCTTGAAGTGGCCAGTGGGAGAAGACCTATAGAGAAAAACGCC ACTGAGAAAACCAATTTAGTTGAATGGGTTAGGAGTTTGCACCAGGAAGGGAAGTTACTAATGGCTTCTGATCCAAGGCT TCAGTGTAATTTTGATGAAGGGGGGATGAGGAGGGTGCTCTTGGTTGGGTTAGCTTGCTCACACCCTGATTCAATTGTAA GACCATCTATGAGGAGTGTGGTTCAGATGCTGCTTGGTGAGGCTGAAGTTACTATTGTCCCTAGAACAAAGCCATCTACT AGTTATAGTACTTCTGAGCTCTTGATGAACTTGCAAGATAGTGAATCTGACAGCAATGCCATAATCACCATCTCTACCTC CCCATCAGAGGACAGCTTCAATCATAGAGATATATAGCATCATGTGATCGGTCTCTCTCTCATCAGAATCAATTTTGAAA CCTAGAAGCTACTCACAAAAGCTTCTCCCCAAAATTGGTTATAGCTCCAAAATCATTTATAAAAGAGTTTCCAAACATGA AATGCATGGCTAGGAACTTGCCATTTTTAAATATAGACTCAAAATGTAGATAGAGAAATATTTATACTTTTGCTTCATGC ATGTAAATGCCAAATTGCCAATACCATACAATTACAGACCTTGAGAAGGAAAGAAATTTTGGGCTTTATGCAATTTTGAG TGGTCTCTTGTTTATGATTTATTGTATAGTTCTGGT
CDS sequence (LotjaGi6g1v0052800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCATCATCACTTCCCATGATCTCCATCATCGTCTTCTTCTTCTTCGCCGGCGCCGCCACACAATTCGACTTCGCGAC CATAACATTGAGCACACTCAAGCTTCTCGGCGATGCTCACCTCACCAGTAACAACACCATCAGCCTCACTGGCGACCCTG CTGTCCCCAATTCCGCCGCCGGCAGGGCACTCTACTCCACCCCGGTCAGATTCCGGCAGCCGGGGAGCCTCCTCCCGGCG AGCTTCACCACCTTCTTCTCCTTCTCCGTCACCAACCTCAACCCCTCATCCGTCGGCGGCGGCCTCGCCTTCCTCATCTC GCCAGACGCCGCCGCCGTTGGCGACCCCGGCGGGTTCCTCGGCCTCGGCGGCTCATCTTCCTCCTTCCTCGCCGTGGAAT TCGACACCCTCATGGATGTTGACCTTCATGACATTAACGGGAACCATGTCGGGTTGGACCTCAACACCGTCGTTTCCACC CAGGTTGGTGATTTGGGGACCATCGGAATCGATCTCAAGAGCGGTGACTCGGTGAACGCGTGGATTGAGTACGATGCGAG GAGCAAAGGGTTTCGCGTTTGGGTCTCGTACTCCAATGTGAAGCCCAGGGATCCGATTCTGAAGGTGGATCTTGATGTGG GTCAGTACGTGAATGAGTTCATGTTCGTGGGGTTTTCTGGGTCAACACAGGGAAGCACAGAGGTTCACAATGTGGAGTGG TGGAGTTTCACCTCCACCTTTGATTCTACGGCGGCGCCGTCGTTGCCTCCGTCTGCTCCACAAAAGGAGAGGAAATCCTC TTCTTGCCACAGTGGGTTGTGTAAGCAGGGAATGGGAGCGGTTGCTGGTGTTGTCACTGCTAGTGCTTTTGCTCTTGCTC TGTTTGCAGGTGCATTGATTTGGGTGTATTCCAAGAAGGTGAAGAGGCGTGAGTCACTTGAGTCAGAAATCATCAAAACC CCTAAAGAGTTTGCTTATAAGGATCTCAAATTGGCCACTAGGGGCTTCAGTGCTAATAGGATTATTGGTCATGGTGCCTT TGGGACTGTGTATAAAGGAGTATTGCCAGAGAGTGGTGACATTGTTGCTGTGAAGCGGTGTAACCATGGTGGTCAGGGGA AGAATGAGTTTTTGTCTGAATTGTCCATAATTGGAAGTCTCCGGCATCGGAATCTTGTTCGGCTTCAAGGTTGGTGCCAT GAAAGAGGTGAAATTTTGTTAGTCTATGACTTGATGCCAAATGGGAGTCTAGATAAGGCTTTGTATGAGGCCAGAACACC TTTACCATGGCCTCACAGGCTCAAGATTCTGTTAGGTGTGTCAACTGTTTTGGCCTACTTGCATCATGAGTGTGAAAATC AGGTGATTCACAGGGACATTAAGACTAGCAATATAATGCTAGATGAAGGATTCAATGCTAGGTTAGGTGATTTCGGATTA GCGAGGCAAACGGAGCATGACAAGTCCCCTGATGCAACCGTGGCTGCTGGCACAATGGGGTACCTGGCTCCTGAGTATGT CCTCACAGGTAGAGCCACTGAGAAAACTGATGTGTTCAGTTTTGGTGCTGTGGTTCTTGAAGTGGCCAGTGGGAGAAGAC CTATAGAGAAAAACGCCACTGAGAAAACCAATTTAGTTGAATGGGTTAGGAGTTTGCACCAGGAAGGGAAGTTACTAATG GCTTCTGATCCAAGGCTTCAGTGTAATTTTGATGAAGGGGGGATGAGGAGGGTGCTCTTGGTTGGGTTAGCTTGCTCACA CCCTGATTCAATTGTAAGACCATCTATGAGGAGTGTGGTTCAGATGCTGCTTGGTGAGGCTGAAGTTACTATTGTCCCTA GAACAAAGCCATCTACTAGTTATAGTACTTCTGAGCTCTTGATGAACTTGCAAGATAGTGAATCTGACAGCAATGCCATA ATCACCATCTCTACCTCCCCATCAGAGGACAGCTTCAATCATAGAGATATATAG
Protein sequence (LotjaGi6g1v0052800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSSLPMISIIVFFFFAGAATQFDFATITLSTLKLLGDAHLTSNNTISLTGDPAVPNSAAGRALYSTPVRFRQPGSLLPA SFTTFFSFSVTNLNPSSVGGGLAFLISPDAAAVGDPGGFLGLGGSSSSFLAVEFDTLMDVDLHDINGNHVGLDLNTVVST QVGDLGTIGIDLKSGDSVNAWIEYDARSKGFRVWVSYSNVKPRDPILKVDLDVGQYVNEFMFVGFSGSTQGSTEVHNVEW WSFTSTFDSTAAPSLPPSAPQKERKSSSCHSGLCKQGMGAVAGVVTASAFALALFAGALIWVYSKKVKRRESLESEIIKT PKEFAYKDLKLATRGFSANRIIGHGAFGTVYKGVLPESGDIVAVKRCNHGGQGKNEFLSELSIIGSLRHRNLVRLQGWCH ERGEILLVYDLMPNGSLDKALYEARTPLPWPHRLKILLGVSTVLAYLHHECENQVIHRDIKTSNIMLDEGFNARLGDFGL ARQTEHDKSPDATVAAGTMGYLAPEYVLTGRATEKTDVFSFGAVVLEVASGRRPIEKNATEKTNLVEWVRSLHQEGKLLM ASDPRLQCNFDEGGMRRVLLVGLACSHPDSIVRPSMRSVVQMLLGEAEVTIVPRTKPSTSYSTSELLMNLQDSESDSNAI ITISTSPSEDSFNHRDI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 8 | 17 | 10 | - | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| PANTHER | 16 | 261 | 246 | 3.5E-292 | – | |
| PANTHER | 16 | 261 | 246 | 3.5E-292 | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Gene3D | 19 | 256 | 238 | 1.1E-61 | – | |
| SUPERFAMILY | 20 | 248 | 229 | 1.49E-55 | ||
| Pfam | 21 | 250 | 230 | 5.4E-55 | ||
| CDD | 23 | 247 | 225 | 2.62817E-74 | ||
| Phobius | 23 | 276 | 254 | - | – | |
| ProSitePatterns | 130 | 136 | 7 | - | ||
| PANTHER | 272 | 641 | 370 | 3.5E-292 | – | |
| PANTHER | 272 | 641 | 370 | 3.5E-292 | – | |
| Phobius | 277 | 303 | 27 | - | – | |
| TMHMM | 281 | 303 | 23 | - | – | |
| Gene3D | 299 | 411 | 113 | 7.9E-32 | – | |
| Phobius | 304 | 657 | 354 | - | – | |
| SUPERFAMILY | 318 | 641 | 324 | 1.15E-77 | ||
| SMART | 336 | 579 | 244 | 2.4E-35 | ||
| ProSiteProfiles | 336 | 628 | 293 | 37.559 | ||
| Pfam | 338 | 547 | 210 | 1.7E-47 | ||
| CDD | 342 | 603 | 262 | 3.92027E-94 | – | |
| ProSitePatterns | 342 | 365 | 24 | - | ||
| Gene3D | 412 | 616 | 205 | 1.3E-60 | – | |
| ProSitePatterns | 455 | 467 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi6g1v0052800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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