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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0103600 |
| Transcript ID | LotjaGi6g1v0103600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein transport protein SEC23; TAIR: AT1G05520.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q4PE39|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr|G7JBC0|G7JBC0_MEDTR Protein transporter Sec23-like protein; Found in the gene: LotjaGi6g1v0103600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:22749247..22756520) extracted from Lotus japonicus Gifu genome v1.2.
TAAAAATAGTGGTGAGTTGTATATTGTGTTAAAGAGCTCGCAGTGGGTTTGGCAGAATTGCAGTTTGCCCTTCTCCTCTC CTCTCCTCTCCTCTCCTCAATCGGAGTTCATTCGATCAATCAATCGATCAGGATGTCGGAGATGGCGAGCACGGATCCCG AGGGAGTAGACGGAGTACGGATGACATGGAACGTGTGGCCCAGCAGCAAAGTCGAAGCAAGCAAGTGCGTGATCCCATTA GCGGCCACCGTCGCCGTGATCCGCCCTCACCCCGACATCCCTCGCCTCCCGTACTCCCCTCTCCGCTGCAAAACCTGCAC CTCCGCCCTCAACCCCTTCGCCCGCGTCGACTTCACCGCCAAGATCTGGATCTGTCCGTTCTGCTATCAACGCAACCATT TCCCTCCTCACTACAACGCCATCTCCGAGACCAATCTCCCCGGTGAACTCTACCCTCAATACACCACCGTCGAATACACC CTCCCTCCTCCTCACTCCGATCCTTCCTCCTCCTCCTCCTCCTCCCCGGTGTTCCTCTTCCTCCTCGACACCTGCCTCAT CGCCGAGGAGATCGGTTTTCTCAAATCCGCTCTCAGTCAGGCAATTGAGCTTTTACCCGACAATGCCCTCGTCGGTTTCA TCTCGTTTGGGACTCAGGTTCAGGTTCATGAATTAGGTTTCTCTGATATCTCAAAGGTTTATGTCTTCCGAGGTTCTAAG GACATTCCCAAGGATCAGATTTTAGAGCAGCTTGGTCTTGCTTCTGCTTCTGCTTCTGCTAGGAGACCGCAGAAAGTTGC ACCTTCCTCCAATTCGCTCGTCTCGCGCTTCTTGATGCCTGCGTCGGATTGTGAATACACTCTCAATGCGGTAACTGGTT TATCAATGGCTTTGCTTTTGTTTACTTTACTTGCATTTATCACTCAGTGGCTTGATTGTGTTGTGACCTCAGCTGCTCGA CGAATTGCAAACCGATCAGTGGCCGGTTCCACCTGGCCGCCGCCCCGCTCGCTGTACTGGTGTTGCCTTGAGTGTTGCTG CCGGTTTGCTTAGTGCTTGTAATCCTGGGACGGGGGCTAGAATCATAGCTTTGGTTGGGGGACCCTGCACAGAAGGACCC GGCACGGTATATCAGTTTGTTTTCTCTTATATACTACTGTATAGTGTATACTCCAGTTTGCTTGTTTGTTATTATTATCT CTACTACTTTTATTGGGATATGAGATAAATTACTGTTTGTATACGAATACTCATCATTCATCAGGATTTTAACATTAGGA ATGAACGCGTTTTGGTGTCTTTAGTTCTGTGGTTGTGTGTTGATAGAGACAGAACTTTAAATTAGATAATTGCTTAAGAA ATTGATCTTTTTGTGTGTGGTAGCTCGCTCCCATTGAAGTGGAATTGTAGTGACGCCATAAATTTCCCTAGCAATCATAG AAACGGAGGTGTTTGAAGTCATGTAGAACTGATTATATTAGGTATTTTAGAAGATATAGGCATCCTGCCAACTATACTTA TGAGGATTGCATATTGAGAAGTTTGTGATATTCAGTTTCTTCTGTGCCATTGACATTTGGACAGAGAATAAAATAGGGGA TACTCTCATCCCTTTGTCTTAATTTGGGTCAAAAGGTTGTATGGTATATTTAGTAAATGTTGAGCAGAACTATGGTTCAT TCCGTGCTTGTTCTTGTTCATATTGACAGTTACTGAACACTCCATTCACAGAATGTCTCTGACACTGAAGATTTTATAAT TTATTTGCAGATTGTGTCAAAAGACCTGTCAGACCCTGTGCGCTCTCATAAGGATCTCGATAAAGACGCAGCACCATTCT TTAAGAAAGCAGTCAAATTCTATGAGAGTCTCGCGAAACAGCTTGTTAGCCAGGGTCATGTTTTGGATCTTTTTGCATCA GCACTTGACCAGGTGAGTGCTCACACTAATTTTCTCAAATTTTTCAAATTATTTCACTTGATAGTTGGATATAGAATGTA TGTATAGATCACAGTGCTTCTGAGTTTCAGAAAGTTAGACTTTTGAAGCATGCAGTATTATTGTGCAGTTCAATTTTCCC AAAGTCCACTTTTGAAGACATATAAGCCCACATTTCAAAACTTTTTAACTTTCAGTTTTGAAACAATCAACGCTTTGGAA AGAAGCCAAGTTTTTTAATAGATTAGTTCTCTAATTTTTTAAATCTTTAAAAAATAAAATAAATAATAATTATTTTTTCT TGAAATAAGTCCAGCTTACTAGTGGTGGATTTCAGAAATCATTTTCGATTTTTCGTATGCTTTTTCCTGATTTAACAGTT TTAATGCTTCAAAATTTTAAACTTTCAGTTTTGAAACAATCAACGCTTTGGAAAGAAGCTAAGATTTTTAATAGATTACC CAAGTTCTCTAATTTTTTAAATCTTTAAAAAATAAAATAAATAATAATAATTTTTTCTTGAAATAAGTCCAGCTTACTAG TGGTGGATTTCAGAAATCATTTTCGTATGCTTTTTCCTGATTTAATTTCATGAAAATATCTTATATTTATTGCATTTTTG TGATATATTTAAATAGAAGCATGCTATACATACCATAGTTCGCCTTCACTATAGTGAAATTTCCAGGGGCTTGTATACAT CCTCTGAATTTACCTTTGTTTCTCTCTAACTGCCAACACTTGTCTACAAGGCCTCTAAGGCTATATATATATATATATAT ATATATATATATATATATATATATATATATATATATTCAATGTGGGTGTTTGTAGTCATGGCACTTCGTTGGCCAATAGT TATATCTGCTTTAGATAGAAGCTGTTAATGTTTTCAAACTTCAATCTTGAATTCTTACTATCGACTTCTTTTTTTTTGAA AAGGATCTTACTATGGACTTTATTGGGGGATATGCTAGAAAGTTTTTGTTTATATTATGCATTAGGCAGTAATGAAAATG AAGTTGGTATTATTGTCAGATTGTTGCATTGAGAAACAATTAGGATCTAATTCTGCTCATTCTTTGTTTTGTGCTGATCC ATGTATGTTTTAAATATATAGGTTGGAGTTGCAGAAATGAAAGTTGTGGTTGAAAGAACTGGTGGCCTTGTTGTCCTGGC TGAAAGTTTTGGTCATTCAGTCTTCAAGGACTCTTTTAAGCATGTTTTTGAGGAAGGGGAGCAATCTCTTGGACTTTGTT TTAAGTGAGCATTGTCCCATATCAAATGTTTCTGATATTTTCTTTGTATTGATGCATTTTCATTTTTCTCTCCCCTTTCT CTTATTTTCTTAATTTCTTTAGATATCTTGCTCACCTGTTATCAGACATACTCACTGCCAAGTTTGTTTATATTTCAGTG GAACATTTGAGATAAATTGTTCAAAGGAAATCAAAATTCAGGGAATAATTGGACCTTGCACGTCGTTGGAAAAGGTTCGA TCATCTTATGTTTGAAACTCTTAACTACACGTTGCTTATTGACTCTGGAATTGTAGTTTGTGTTGGGTCAACGGTATTAA GAGTGAGCCGATACATGATATTTCTGGATTCTGATGGTTTACCATCACATATTGCAGAAAGAGCCTTCTGTTTCTGATAC TGTTATAGGAGAGGGGAACACAACTGCATGGAAGATGTGTGGTCTTGACAAGAGTACGTGCTTGACTGTGTTGTTTGATC TTTCATCAAGTGATCGTTCAAACACTCCAGGTGGTGCCAACCAACAACTGTACCTGCAGTTCCTTACAAGGTTATAATGG GGAAATTTCACTAATAGGATCTCATACATATATGATTTTGTGCATATTACGATTTGCACACTGGGCCTTGAATATTAATG ATAATGTTCTTATGGCAGTTACCAGGCGCCAGATGGTCAATTAGTGCTTCGTGTCACAACAGTAACCAGAAGATGGGTAG ACAGTTCTGTTAGCTCTGAGGTAGTTTCAGTCTTTTTTTTATCTATGGCTGAAGATGTCTTTTTATTTGTCATTGTCAAA GAAATAGTTGGAGCTTGTGAATTTCATGATATTAAGAAGCTTCAAAGTTTTTTCTTTAAGCACTTCTTGCTGTCTAGTCT AATTCTCAAGTTATTTCATTTGCAGATAGCTGACCTTATCACATTTACGTATTTATTTTCTATATTTATGACAAAGTGAA AGTTAGTTGTTTAGTCCTGTTAGAACTGACATCAGAAGAGAAGAAAATACATTGATTTTATTTAGAAAAATGAATGCAGC TTCTGAGGGTTTCGAGAGCCTAAGTTCTCCCTAGAATTCCCAATTTTACAATATGGATGCCTTACAATGAGTTCCCTTTT CCTTTTTATACTACACTAACTTCCTAACTAAATAAACCATTCACACTTTAGGTTAGTTACTTATTATTACAACAAGGTTA GTTACTTGTTATTACAATAACAACCTCTATCAACCTAACTATCACTCCCCTCCCTATTCCTATCAAGTCCGTATGTTGCT TGCTATTTAGGACTGCATTTTATTGGGAAGGAGATTGTTAAATTGATAATTGGCAGGACCTTTAATTGTTACATTACTAT GCAATTTAGGAATTGGTTCAAGGATTTGACCAAGAAACTGCTGCAGTGGTAATGGCTAGATATGCTTCTCTGAAGATGGA GACTGAGGTATGTCACAAATTATCTAACTATCCATTCTATATGGTATTTTAACACCATTGGGTTTTATTTGCTCAAGCTG CATTATTTTATAATTTGTTCGAATGGATATTGTTGGGAGTTTCAGTAAAACATGAAATTGGGAGAAATGGTTTTATAATT ATTAAAATTTGCACTTGTTTATTGTTTTGCTATTATCTTGCTACAAATAACCGTTTTGCCAGATATGAAATTGAGTTGTT GGACATGTATTACATGTTATATCTCTTTTAAGTAAACTATTTTTATAAACAAATGCCTTACTGGGCATCAATTTTTGTTT GATCAGGAAACATTTGATGCCACACGGTGGTTGGATAGGTTCCTCATCCGGCTCTGTTCCAAGTTTGGTGACTACCGCAA GGATGATCCATCATCTTTTACATTAAACCCGTCGTTTTCGCTGTTCCCCCAGTTTATGTTCAATCTTCGACGCTCACAGT TTGTACAGGTACCTTCGATTGTAATTTTCTTCCTTACCTACTTTTCAAACTTATTTGTTAACTTTGTGGCATATGGATGG TGAATTGTATTGGCAGGTTTTTAACAACAGTCCAGATGAGACTGCATACTTCCGCATGTTGTTAAACCGGGAAAATATTA GTAATGCAGCCGTCATGATTCAGCCATCTCTAATATCATATTCATTTAATTCACTGCCTGCACCAGCATTGTTAGATGTG GCTTCCATTGCCGCAGACCGGATTCTGTTGCTAGATTCATATTTCAGTGTGGTTATTTTTCACGGGATGACAATAGCTCA GTGGCGCAACTTGGGATACCAGAACCAACCAGAACACCAGGTCTGTGCATAGTCCTGCTAAGGAAATTTTTACCTCAAAA TTCAGCGTGCAAATTATATAGATTTTATAATTTAATCTTCTCATTGGGGAGGCATTAGTTACTTTCTGTTACTTTTTCTA TGGAACTTGTTTTGCTCTGAGCCATATTTATGTTTAGTGTTGTGAGTTGTATCTACCATTATTCCTTTCATCACTCTGCT GATAACTTTAATATATGGCACAGGCATTTGCCCAGCTATTACGAGCTCCACATGATGATGCCCAAATGATAATCAGAGAA CGGTTCCCTGTCCCTAGATTGGTAGTTTGTGATCAACATGGTTCCCAGGTCAGTACTGTTTAGCTAAAGCAATTTGAGTG TTATTTTTCTTATTAAATGTTGCAGAGTCTTTCCTGAATTCTCATACCATGAGCAATACTGATGTAAATTATTTCTAACC CTTCCATAACATACTGTCCTTTTCTCCCCGTCTATTAATTCCCTTAAGTTTAGATTTTCATCATGGAAAACTTAGCTTGG TTTTCATTGATGTTTTGAGCAGGCTAGATTTTTGTTAGCAAAGCTGAATCCCTCAGCAACATATAATAGTGCACATGAGA TGGCTGCTGGTTCAGATGTAATCTTTACTGATGATGTGAGCCTTCAAGTTTTCTTTGAGCATCTGCAAAGGCTGGCTGTC CAATCTTGACAGCAGATAATTGTAGAGACATACAGTTTAGGGTTCTGGACTTTTTGGTTTGGGGAATTCACCAATGATGT GTGTCCTGCCATATGCTGTTGCATTCAGTTATTTTCCTTTCTTTCCTATATTCTTAACGAAGTGAAGGTCGGAGGCCTGC ATAAATTGAGGAATAACGAAGGAAGACCTGAAACATGATTCTTTGAGGTTCTGGTGGAATTTTGTTTAATGGAGAAAATA AATGGTTCAAAAGTATGTAGAGTTTGGTTATTGCGGAAAGAAGGGATCGAGATTCGAGTTAACAGCTACCTCTGCCACAG CAGTATAGCAAATGAGGGAGATATTTATCTCATTTTTTTTTTCAGATTTGTTTTGTCCTGGATATTAATTTTGGGTTCCT CATCTGGTAAATTCATATAGTTGTTTACATTTACATGCTCCCTAGGTTGCAAAGTAACTTAAGTCATTTTGTCATGTTGG AGTTTGAAAGCATACCTCTTCATATTGTTTTGTATTGTATATTGAGAAGTAATGCATACAGGACTCATCGTGGTGAATGA ATGCTGTGATCCCTGTTTACGTTCTGACTTCCATGCCTGCCTAAAAAAGGTCAAAATCTCCTTATTATAAATGAACCGAG TCCACTAGCCTTTACTAGGGGTATTGGAGAATGGGGGCTAGACACCCTAAGCGAGGGAAATGAAGAGAACAAATGAGTAA AAGATGTGATATATGATTAGATGTGATAGAAAGAAAGATGTATAGAGGAAAATGAGTGTATGTCTCTTGTTTGTGTGTTT AATTGAGGGTGTATTCTGGTTGGTTATGTCTAAATACATGTCGGATTCTGTCAGAGCTATTATGTTGGGTTGGTTTGGGT TTTCTCAAATTTTACTAGTCATTCATAACTTAACTTGTGATAGGGTCATTCATAACATAGGGATATACAATGTCTTCAAA AATAAGAAAAACAATAGAAAATTATGGAATGTTTGATTGCAGTTTTAGTTTTCAGTTTTTAAAATAATTTATAAAAACAG TTTTCAGAAGAAGAAAACAATATGAATGACATATTTTCCAACATTTATAAAACTGATATCTGAAAACTAAATAT
CDS sequence (LotjaGi6g1v0103600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGGAGATGGCGAGCACGGATCCCGAGGGAGTAGACGGAGTACGGATGACATGGAACGTGTGGCCCAGCAGCAAAGT CGAAGCAAGCAAGTGCGTGATCCCATTAGCGGCCACCGTCGCCGTGATCCGCCCTCACCCCGACATCCCTCGCCTCCCGT ACTCCCCTCTCCGCTGCAAAACCTGCACCTCCGCCCTCAACCCCTTCGCCCGCGTCGACTTCACCGCCAAGATCTGGATC TGTCCGTTCTGCTATCAACGCAACCATTTCCCTCCTCACTACAACGCCATCTCCGAGACCAATCTCCCCGGTGAACTCTA CCCTCAATACACCACCGTCGAATACACCCTCCCTCCTCCTCACTCCGATCCTTCCTCCTCCTCCTCCTCCTCCCCGGTGT TCCTCTTCCTCCTCGACACCTGCCTCATCGCCGAGGAGATCGGTTTTCTCAAATCCGCTCTCAGTCAGGCAATTGAGCTT TTACCCGACAATGCCCTCGTCGGTTTCATCTCGTTTGGGACTCAGGTTCAGGTTCATGAATTAGGTTTCTCTGATATCTC AAAGGTTTATGTCTTCCGAGGTTCTAAGGACATTCCCAAGGATCAGATTTTAGAGCAGCTTGGTCTTGCTTCTGCTTCTG CTTCTGCTAGGAGACCGCAGAAAGTTGCACCTTCCTCCAATTCGCTCGTCTCGCGCTTCTTGATGCCTGCGTCGGATTGT GAATACACTCTCAATGCGCTGCTCGACGAATTGCAAACCGATCAGTGGCCGGTTCCACCTGGCCGCCGCCCCGCTCGCTG TACTGGTGTTGCCTTGAGTGTTGCTGCCGGTTTGCTTAGTGCTTGTAATCCTGGGACGGGGGCTAGAATCATAGCTTTGG TTGGGGGACCCTGCACAGAAGGACCCGGCACGATTGTGTCAAAAGACCTGTCAGACCCTGTGCGCTCTCATAAGGATCTC GATAAAGACGCAGCACCATTCTTTAAGAAAGCAGTCAAATTCTATGAGAGTCTCGCGAAACAGCTTGTTAGCCAGGGTCA TGTTTTGGATCTTTTTGCATCAGCACTTGACCAGGTTGGAGTTGCAGAAATGAAAGTTGTGGTTGAAAGAACTGGTGGCC TTGTTGTCCTGGCTGAAAGTTTTGGTCATTCAGTCTTCAAGGACTCTTTTAAGCATGTTTTTGAGGAAGGGGAGCAATCT CTTGGACTTTGTTTTAATGGAACATTTGAGATAAATTGTTCAAAGGAAATCAAAATTCAGGGAATAATTGGACCTTGCAC GTCGTTGGAAAAGAAAGAGCCTTCTGTTTCTGATACTGTTATAGGAGAGGGGAACACAACTGCATGGAAGATGTGTGGTC TTGACAAGAGTACGTGCTTGACTGTGTTGTTTGATCTTTCATCAAGTGATCGTTCAAACACTCCAGGTGGTGCCAACCAA CAACTGTACCTGCAGTTCCTTACAAGTTACCAGGCGCCAGATGGTCAATTAGTGCTTCGTGTCACAACAGTAACCAGAAG ATGGGTAGACAGTTCTGTTAGCTCTGAGGAATTGGTTCAAGGATTTGACCAAGAAACTGCTGCAGTGGTAATGGCTAGAT ATGCTTCTCTGAAGATGGAGACTGAGGAAACATTTGATGCCACACGGTGGTTGGATAGGTTCCTCATCCGGCTCTGTTCC AAGTTTGGTGACTACCGCAAGGATGATCCATCATCTTTTACATTAAACCCGTCGTTTTCGCTGTTCCCCCAGTTTATGTT CAATCTTCGACGCTCACAGTTTGTACAGGTTTTTAACAACAGTCCAGATGAGACTGCATACTTCCGCATGTTGTTAAACC GGGAAAATATTAGTAATGCAGCCGTCATGATTCAGCCATCTCTAATATCATATTCATTTAATTCACTGCCTGCACCAGCA TTGTTAGATGTGGCTTCCATTGCCGCAGACCGGATTCTGTTGCTAGATTCATATTTCAGTGTGGTTATTTTTCACGGGAT GACAATAGCTCAGTGGCGCAACTTGGGATACCAGAACCAACCAGAACACCAGGCATTTGCCCAGCTATTACGAGCTCCAC ATGATGATGCCCAAATGATAATCAGAGAACGGTTCCCTGTCCCTAGATTGGTAGTTTGTGATCAACATGGTTCCCAGGCT AGATTTTTGTTAGCAAAGCTGAATCCCTCAGCAACATATAATAGTGCACATGAGATGGCTGCTGGTTCAGATGTAATCTT TACTGATGATGTGAGCCTTCAAGTTTTCTTTGAGCATCTGCAAAGGCTGGCTGTCCAATCTTGA
Protein sequence (LotjaGi6g1v0103600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSEMASTDPEGVDGVRMTWNVWPSSKVEASKCVIPLAATVAVIRPHPDIPRLPYSPLRCKTCTSALNPFARVDFTAKIWI CPFCYQRNHFPPHYNAISETNLPGELYPQYTTVEYTLPPPHSDPSSSSSSSPVFLFLLDTCLIAEEIGFLKSALSQAIEL LPDNALVGFISFGTQVQVHELGFSDISKVYVFRGSKDIPKDQILEQLGLASASASARRPQKVAPSSNSLVSRFLMPASDC EYTLNALLDELQTDQWPVPPGRRPARCTGVALSVAAGLLSACNPGTGARIIALVGGPCTEGPGTIVSKDLSDPVRSHKDL DKDAAPFFKKAVKFYESLAKQLVSQGHVLDLFASALDQVGVAEMKVVVERTGGLVVLAESFGHSVFKDSFKHVFEEGEQS LGLCFNGTFEINCSKEIKIQGIIGPCTSLEKKEPSVSDTVIGEGNTTAWKMCGLDKSTCLTVLFDLSSSDRSNTPGGANQ QLYLQFLTSYQAPDGQLVLRVTTVTRRWVDSSVSSEELVQGFDQETAAVVMARYASLKMETEETFDATRWLDRFLIRLCS KFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAAVMIQPSLISYSFNSLPAPA LLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQAFAQLLRAPHDDAQMIIRERFPVPRLVVCDQHGSQA RFLLAKLNPSATYNSAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 766 | 763 | 0.0 | – | |
| PANTHER | 4 | 766 | 763 | 0.0 | ||
| SUPERFAMILY | 8 | 522 | 515 | 5.89E-57 | – | |
| Gene3D | 13 | 505 | 493 | 1.5E-194 | – | |
| SUPERFAMILY | 47 | 119 | 73 | 2.35E-22 | ||
| Gene3D | 53 | 112 | 60 | 1.5E-194 | – | |
| Pfam | 56 | 94 | 39 | 9.2E-16 | ||
| Gene3D | 131 | 403 | 273 | 1.5E-194 | ||
| Pfam | 131 | 394 | 264 | 7.1E-71 | ||
| SUPERFAMILY | 132 | 395 | 264 | 3.67E-82 | ||
| Pfam | 405 | 509 | 105 | 7.2E-30 | ||
| Gene3D | 519 | 764 | 246 | 3.2E-112 | – | |
| Pfam | 523 | 619 | 97 | 6.2E-23 | ||
| SUPERFAMILY | 523 | 625 | 103 | 1.26E-45 | ||
| CDD | 615 | 735 | 121 | 1.97329E-70 | ||
| Gene3D | 625 | 729 | 105 | 3.2E-112 | ||
| SUPERFAMILY | 626 | 766 | 141 | 1.7E-53 | ||
| Pfam | 635 | 723 | 89 | 2.9E-14 | ||
| Coils | 765 | 767 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | ER to Golgi vesicle-mediated transport | The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Cellular component | COPII vesicle coat | One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state. | ||
| Biological process | COPII-coated vesicle budding | The evagination of an endoplasmic reticulum membrane, resulting in formation of a COPII-coated vesicle. |
Expression pattern of LotjaGi6g1v0103600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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