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LotjaGi6g1v0170500.4

Overview

Field Value
Gene ID LotjaGi6g1v0170500
Transcript ID LotjaGi6g1v0170500.4
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Serine/threonine-protein phosphatase; TAIR: AT2G42810.2 protein phosphatase 5.2; Swiss-Prot: sp|Q84K11|PPP5_SOLLC Serine/threonine-protein phosphatase 5; TrEMBL-Plants: tr|A0A0B2NRB4|A0A0B2NRB4_GLYSO Serine/threonine-protein phosphatase 5; Found in the gene: LotjaGi6g1v0170500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:45714190..45721330) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCAACTGAAAATTCTAATGTTTCAAAGGCTGAGGAACTGAAACTCCTTGCGAATGATGCATTCAAAGGTAATTACTA ATTAATAATGAGATTATTTCTTTGTGATTTGATTCTCACACAATGAGAGCAAATATGTGAAGTGTTTTATGCCGAATTGT TGGTTAACATAGTCATGAACGTTTACATTTCTTTGCTAAGACTTGTTGATCCCGTGGGTTACTTTTTCAGCTCGGAAATA TGCCCAAGCTATTGAGCTTTACACAGAAGCAATTGAGCTAGATAGTCAAAATGCAGTTTACTTGGCTAATCGTGCCTTTG CTCATCTTCGGCTTGAGGAATATGGTAGTGCAATACTAGATGCCACAAAGGCTATTGAAGTTGATCCTAAATATTCAAAG GTGCTCTGAATCCTTGAACTTCAGGGGCTGTCTTGTATTTTGATTTTTTGAATAAAAATATATTTCCTGATTATGGTTTT TTGTTACAGGGTTATTACAGGCGAGGTGCAGCTCATCTTGGGCTGGGAAAGTTCAAGGAAGCACTGAAAGATTTTCAACA GGTAACTAATGCAATTATAAATATCTGTTTTTTACCAGTCTGGAAATGGTGGAGCCTGGGTTGGGAATAACATGTTCGTA TTACTAGATCAGTCATTTTGCAACATTGGAGAACTTTGTTAGGCTAATATTCGTAGTTTTTTTACTAATCACGTAAATAA ACAATATCAAAGATAATATGGGAGAAGCAAAATCAAATTCACTAACGTTACTCAGTATATTTATTAAACATTATTGGCCT TAGTACTTTAGAGGAACATATGTGGCAGAATTTGACATTATTCGATAGTAACTGGAACAAGAAATAGGCATTATTCATTA GATATATGCACTGTATAGGTTCCTGCTCTTATCAATGTGATATTAGTCCCAAAAATGGTTTACAGCCACTGTAAAAGGAA GGAAAATAAAGAGCAAGTGAAAAAAAATAGATAAAGATGTTGCAGGCATTGTGCTCAAGATTGACCTCATCCAACCTAGG ATCCGGAGGGGGGTAGCAGACGCATAAAAACTTGAGATGTAACAGGAATTATGAGATCCTAGTAATATACACAGGTATAT TCAAACATATAGGATAAATATAAAACATAAGAAAGCACCTCCGCCCCTGACATTTCTACTTACAGGCTTACAGCCACACA GAACTGCCAACCATTGAACAAAACAAAGGCAATACAGGGTACTAACACACAAATAAATGCAGCACTCAAACTTCGAGGTT TCTACGAATATCTGTTCCTTCTCTCGTGCTCTCCTCATTTTTCATGTGGATGTTGAAGCCTTTGCTTTCTTTATGTTGTT CACCTTAATCATGGGAGGGTTCCTATCAATATAACTCTAAATAATCCTGCCGTGTGGACATCCTGTACAGCTGTGGGCCT GTGGCATAGAAGTCTAATTTGGAAGTTGGAATCAACTAATGATCATTGCAGATATTGTGATACCAAGTACCCGTTTGGGT GCAAACGAAAGAGCACTTATTACAGCTTATTTAGTGCTTTTCCTACTAGATAAGCTCCAATAAGCCCATATCCAAATGGG CTCAAGTATAACTTGGAAGCAACTATAATGATCATTATAGTTTTACGTAATGAAATATATTAATTGTTGCCTACTTAAAT AGGTTATCAATATAGGACTAGAGTACTTGCTATAGAAATAAGTAAACAATGTGATAGTCACAGATTTTGTTCTTAAATAA CACACTTATTATTTATATTCATAAATATCTAAGAGTTGAATGTCAAGTTAGCCACTGAAAGCATCCATATTGTAGAAAAA AGAAAAAGAAAGTATTGTCTTCTCTGTCATTATGTAATTTACAACTTATGTTACAAATAGCAAATTAGCAATACGACTAT AGCAAATTGTGGTTATGGTTGCAATGTGATTTTGGAAGGCTTATGCAGGCCAATGTGATCTGCAACTTCAGCCTAATATG GTTGCAGAGGATGCTGCAACCATGTGAGTTCTTTTTTTGTTTGGAACCATTCGGGCAAAAAGAAGCTGGCCTGTCAACTT ACTTTCTAACTCAAGAAATGAAACTCATTTTTTAAAAAATTTACTTGCTAGTTGCTAATGTTTGTCGAAATTGTTGGAGT CTGAAAATATTTCTTGGCCAGCAACCTTATTGAAATGTGAGTCAGGCAGTCAGCTGTACTACTGGCTGAAGCAGACAGTT TGTTAACCTTTAACATTGTCATGTGTTCTTGTAACTTTTGTTTCAGCCATACCTTGTTCCAATATACTGCTTCACTTTAA TAGTTCTGCAACATGCACTCCTTTCAATGTGCAAACATGTTTGACTTGGCATACTTATATTGACCAGGTCAAAAAAATGT GTCCAAATGATCCTGACGCAACAAAGAAATTGAAGGAATGTGAAAAGGCTGTTATGAAACTTAAATTTGAAGAAGCAATT GCTTTACCAGAGTCTCAAAGGCGTTCAGTAGCTGAATCCATAGATTTCCATTCAATAGGTACTACTATGAATATGGTTTC TTATGCTAGTATATTTATTTTATCGTATTTTCCCTTGCGTACATCTTTTTTTGTCATCTGGTTTTTTGTGTTTTATTATT CATCATGCTGTCATTCTATTAAGGGAACTAATGCAGCTTTAATCTTGTAAGCTTCGAATAATATCTTGTGCACAACATTC CCTTTAAAGGTGGCTGCAGCTTTGTTTTGATTATTTGAAAGTTTAGTAAGGTGTCTCCTGTTATGAGTATCTTTTGACCT TGACTGTGTTCTTCGTAAGTAGATGCAAGTTTTTCAAGGATCTTGACATCCTCAATGTGGGGAATGACGCAATCATTTTT GTTATTTCAATAATTAAGTTATGGATGTGGTTTTCAGTTTTTATCAGATTATTTGACTGAGTGTGGTCCTGTGTCTTCTC CTCATTTAATTGTGTTGTCGATCTAAACTGGTAATTTTCGTGGAGCACATTAGATGGATAAGGTGCCAGTGCCACTCAAT ACCTAGTTTTTTTTTTTTGAAAGCTTCAATTCACCACCGTATGACTGTCTTTTTATGAATGTTTGTCATACTTTACAATA AATTATCACTTTTTGTACATATTGTATCATTATAGGAAAGGGCCGCAAATCTGCGGTGCCAACCGAAGTGGCCATAGCAG CAGTGACAGCAGCAGTTATGGCAGTGGTGGTGATGTTGTTCAGGACATCAAAGACCACGATAGTAGCTGTAATTGTGGTT GGTTTGCTGTTGCTCCTTGGGGCATATTGGTGGAGTGGTCGCAATACTGGTACATTTAGGAGTCATTTACGGGACCAAGG TCTTAGCTTCAAAATTAATATAGACCTAAACATTGTAAATCACAGGATCGTTGATCCTAATTAAATTGAGAATTTTGATA TAAGTCAAATGGAATCATTATTTAGAATACATTAGAAAATAGACTGCTTTATTTATAATGCAGCATGATTCTTTAAATTG GCTACTTTTCGGAACTAATTAATAATTCTGCACCATAAGAAATGTCTCTTAAGATATCAGTTCATTAGAATGTGTTTGTT ACCCTTCTTGGGGGTTTCTAGGACCAACGTAGGGCCATTCCTTTAGGCATTATTCCTTTGGGATTTCAAAATTTCAATTT GGTCTATTTTCCAATATGGATAGTGGACCCAATGTATTCTTCATTTTGTTTTTAAGAGTATATCTAAACGAGTAAGTGAA GTGCAAGAAAGGTGGATCTGTGCTCCAGCTAAATAAACTAATAAAGACTAGATATAAATGTCATGTCTATTTCCCACTAT TTTCTGTTGCTTGCAAACTTGTTTGAATTCTTTCTACTGGGTTGTTCAATTGCTACCTGGATTGGCATATCTACAAATTG TAATTTCATATTTGATAAGATTGTTATGCATTTTATAGATATCTTTGGATTCAGTGGAGATAATATAATTTTCCTGATCT TAAAACTCTCCTTTTTATTGAATTATTCATTTCAATGAGCATTAACTATTCCTATTATTTTTAATTGTCAGTTATCGTTG TGATTAGTAACCTTTGTTTTTTTTATCTCTAATCTCTATATTTACTTTTTGATAAGAATCTCTATATTTACTATAAGCTA ATTCATGTTCAACCGGGGCATTTGGTTTCACTCACTGGCATGAACAAATATTTGTGTTTCATTTTAATGCTAGATGTTGA GTCACAATATTCTGGAGCAAGAATAGAGGGGGACGTTGTTACTTTGGATTTTGTAAAGAAGATGATGGATGATTTCAAGA ATCAGAAGAGCTTGCATAAACGGTACTGAAGGAAGAAATTTGATTGCTTTTATGTCTGTTTCTTGAAGTGTCCCTTGACT TCGGTCCCATTTGAATGTTTTAGGTATGCATTCCAGATTGTATTGCAAACAAGAGAGATATTGCAAGCTTTGCCTTCTCT TGTTGATATAACTGTTCCTGATGGCAAACATTTTACTGTTTGTGGCGATGTTCATGGTCAGGTAATTGGTTTATTATTAT GTTCTTTGAATTGTTTAGATTAGTTTGTGTCTCAGAAGTTGGAGTTGAATTTGAATTTAAGCACTGCTAAGTTGATGAGT GACTTCTTAATATATCAAAACAAACTGTTGCTTATATATTCAAGGTGGCTTTTGCTATTTTTAATATTAAGGGGATAGAA TTGTTCCCATAGCCTATATTTGATTTGCCTCCCTAAGTCATAAACTGAGTTTCTGTTACCATTGTGCATGGACTGGAGAA CTATTTTGTGCTGGTGAGCTTGTTCATTAATGTTTTGTGTTTGTTTTATTCGTGGCACATTTGTTAGGGGGGACTGTACT GCCATGTTGAATTTAAGAATATCTATTGTTATTTTTTAATCTAGTGAATAATAGAATGTTATTAGAAGAGAAAAAACAAA GAAGAACAGAAACATGGGATATGAAATTCTTAAAGAGAAGGGAAAAAAAATTCAGTACAGCAAAAGAGAAATCATCCGTT AGAGTTCAAACATTCGACAAAGACATGAACTGAAACAGCTTCCTAACTTTATCGACTTAAAACTTTGATAGCAGTCGTGT ATTGCTGTGTATGTCTTAATCGTTCCTATTTTAGTCTTAACAGTAAAAAGAGCATCCTGTCTGAGTTCGGTAGGATAGGG TCATAGGGTGGGTGCTTGTGTGTAATTCACTAATTCTTGATTGGTAAATGAAAGAATTTAGAAAAAGTGTGCCTGTGAGG AAACAGACTTAGCCCAATTTTTGCTGAAATAATCAGCCTTAACAATGCTTTGGATTGTGTTTCCTGAGTAACTTGAATTG AATGGTAACAATCATCAAGCCCAATTTTTCTCCATTTTCATTTCTCTAACATACTTGAATGTGAAAACTTCTTATTAAAT TTGCACCATGTTGCTTGGCTTTTGAGTTTTCTTTTGTTTTTCTTTAATTCTTAACCATTCAATTTTTTCATGACTCCTGC AGTACTATGATCTATTAAATATTTTTGAGCTCAATGGGCTTCCTTCAGAAGAGAATCCATATCTATTTAATGGTGACTTT GTGGATAGAGGATCATTTTCTTTGGAAGTCATCCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGGTGAACCCTA GATCTTTATTAGTCTGTAAGTTTTGTTACTTTTTTTTTTGTGTACATTATATATTTACTATCTCTGAACTACCCATTAGC TACTTGTGAAGGTCTGTTAGAATAAAAAATACCTCTTTCTTTCATAACATTATATGTTCAAATTTGTTGCAAATCCTTTT GAAATTGAGGTCATAAATTGCTGTGTTTACTTTTATTGTTTCAAATGAGTTGTATGATGCTGTTTGTGTGATGGGATTTT GCATAAATCATTGCTTGCTCCTTTCCCCACTATATCCATATCACTTGTTTAAGGCAATATACTTTCTTCTGCCTGGGATA TTGTAACTTATTTTGTTGTCGCATAATTTTCAGCCATACATCTAGCTAGGGGAAATCACGAGAGTAAGAGCATGAACAAG ATATATGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGACACATTTATTGAACTATTTGCGGAAGTCTTCTGCTGTTT ACCTTTGGCTCATGTGATAAATGAGAAAGTTTTCGTAGTCCATGGAGGTCTTTTTAGCGTTGATGGGGTCAAACTCTCTG ACATCCGGTCTATTAATCGGTTTTGTGAGCCTCCTGAAGAAGGTTAGATGCATCCAATTTTTTGTCTTCAATGTTTCTGA CAGTTTCCCAGATATTCTTGCACTTCATATTCCTAAGTCCCTTTGCCTTTTCTCTCCCGCGTGGTATTGTAATTTTTTGT TTCTATGTGTGTCTGATATGTGTAGGGTTGATGTGTGAATTGCTATGGAGTGATCCGCAGCCTCTCCCTGGAAGAGGTCC AAGCAAGCGTGGTGTAGGCCTTTCTTTTGGTGGAGATGTGACAAAAAGGTTTTTGCAGGAAAATAATTTAGGTATGTTTT CCATTGGTGTGATACTTTGTTTCTGTATTCGTTCTTTAATCAGTGACTTCATACAAAAACCAATTTACAGATTTAGTTGT GCGGTCTCATGAAGTAAAGGATGAGGGTTACGAGATTGAACATAATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATT ATTGTGACCAGGTAACCAAATCCTTTTTGTTTCTATTTTTAAACAACTTTATGGCATTTACTTAAGAATCACTTTTGCTC CTATGAAGTACCAGAGTTAAATCCTACACCATGTTGATATTTCATTGTATGCTGCAGATGGGTAACAAAGGTGCCTTTAT TCGATTTAAAGCACCTGATTTGAAACCTGACATTGTTACATTCTCAGCAGTGGTTAGTATCTTCTGTATTTTATTGTCTG CTATGGTATCTTATATTGGGAGTTGGGACAATCAAGTTAATGAAGTTCAGATGAACATTTACCTTTCAATTTGTTTGACA TGCTTACATTTTGGGTCTTGTTCATTTTGTTGAATTTGCAGGCACATCCCGATGTTAAGCCAATGGCTTATGCAAACAAC TTCCTCCGGATGTTTCAATAG 

CDS sequence (LotjaGi6g1v0170500.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAACTGAAAATTCTAATGTTTCAAAGGCTGAGGAACTGAAACTCCTTGCGAATGATGCATTCAAAGCTCGGAAATA TGCCCAAGCTATTGAGCTTTACACAGAAGCAATTGAGCTAGATAGTCAAAATGCAGTTTACTTGGCTAATCGTGCCTTTG CTCATCTTCGGCTTGAGGAATATGGTAGTGCAATACTAGATGCCACAAAGGCTATTGAAGTTGATCCTAAATATTCAAAG GGTTATTACAGGCGAGGTGCAGCTCATCTTGGGCTGGGAAAGTTCAAGGAAGCACTGAAAGATTTTCAACAGGTCAAAAA AATGTGTCCAAATGATCCTGACGCAACAAAGAAATTGAAGGAATGTGAAAAGGCTGTTATGAAACTTAAATTTGAAGAAG CAATTGCTTTACCAGAGTCTCAAAGGCGTTCAGTAGCTGAATCCATAGATTTCCATTCAATAGGAAAGGGCCGCAAATCT GCGGTGCCAACCGAAGTGGCCATAGCAGCAGTGACAGCAGCAGTTATGGCAGTGGTGGTGATGTTGTTCAGGACATCAAA GACCACGATAGTAGCTGTAATTGTGGTTGGTTTGCTGTTGCTCCTTGGGGCATATTGGTGGAGTGGTCGCAATACTGATG TTGAGTCACAATATTCTGGAGCAAGAATAGAGGGGGACGTTGTTACTTTGGATTTTGTAAAGAAGATGATGGATGATTTC AAGAATCAGAAGAGCTTGCATAAACGGTATGCATTCCAGATTGTATTGCAAACAAGAGAGATATTGCAAGCTTTGCCTTC TCTTGTTGATATAACTGTTCCTGATGGCAAACATTTTACTGTTTGTGGCGATGTTCATGGTCAGTACTATGATCTATTAA ATATTTTTGAGCTCAATGGGCTTCCTTCAGAAGAGAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGATCATTT TCTTTGGAAGTCATCCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCCATACATCTAGCTAGGGGAAATCACGA GAGTAAGAGCATGAACAAGATATATGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGACACATTTATTGAACTATTTG CGGAAGTCTTCTGCTGTTTACCTTTGGCTCATGTGATAAATGAGAAAGTTTTCGTAGTCCATGGAGGTCTTTTTAGCGTT GATGGGGTCAAACTCTCTGACATCCGGTCTATTAATCGGTTTTGTGAGCCTCCTGAAGAAGGGTTGATGTGTGAATTGCT ATGGAGTGATCCGCAGCCTCTCCCTGGAAGAGGTCCAAGCAAGCGTGGTGTAGGCCTTTCTTTTGGTGGAGATGTGACAA AAAGGTTTTTGCAGGAAAATAATTTAGATTTAGTTGTGCGGTCTCATGAAGTAAAGGATGAGGGTTACGAGATTGAACAT AATGGTAAACTCATAACTGTGTTTTCTGCTCCAAATTATTGTGACCAGATGGGTAACAAAGGTGCCTTTATTCGATTTAA AGCACCTGATTTGAAACCTGACATTGTTACATTCTCAGCAGTGGCACATCCCGATGTTAAGCCAATGGCTTATGCAAACA ACTTCCTCCGGATGTTTCAATAG 

Protein sequence (LotjaGi6g1v0170500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MATENSNVSKAEELKLLANDAFKARKYAQAIELYTEAIELDSQNAVYLANRAFAHLRLEEYGSAILDATKAIEVDPKYSK GYYRRGAAHLGLGKFKEALKDFQQVKKMCPNDPDATKKLKECEKAVMKLKFEEAIALPESQRRSVAESIDFHSIGKGRKS AVPTEVAIAAVTAAVMAVVVMLFRTSKTTIVAVIVVGLLLLLGAYWWSGRNTDVESQYSGARIEGDVVTLDFVKKMMDDF KNQKSLHKRYAFQIVLQTREILQALPSLVDITVPDGKHFTVCGDVHGQYYDLLNIFELNGLPSEENPYLFNGDFVDRGSF SLEVILTLFAFKCMSPSAIHLARGNHESKSMNKIYGFEGEVRSKLNDTFIELFAEVFCCLPLAHVINEKVFVVHGGLFSV DGVKLSDIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLQENNLDLVVRSHEVKDEGYEIEH NGKLITVFSAPNYCDQMGNKGAFIRFKAPDLKPDIVTFSAVAHPDVKPMAYANNFLRMFQ 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 165 165 -
PIRSF 1 540 540 2.0E-251
Gene3D 2 164 163 8.2E-53
PANTHER 6 538 533 1.3E-228
PANTHER 6 538 533 1.3E-228
SUPERFAMILY 7 138 132 1.07E-34
ProSiteProfiles 11 44 34 9.204
SMART 11 44 34 7.9E-4
ProSiteProfiles 11 112 102 24.52
Pfam 17 77 61 8.3E-6
SMART 45 78 34 0.0013
ProSiteProfiles 45 78 34 7.405
ProSiteProfiles 79 112 34 10.797
SMART 79 112 34 4.2E-6
Pfam 80 112 33 1.3E-7
TMHMM 161 183 23 -
Phobius 166 183 18 -
Phobius 184 189 6 -
Phobius 190 207 18 -
TMHMM 190 209 20 -
Gene3D 206 539 334 9.0E-139
Phobius 208 540 333 -
Pfam 211 270 60 9.3E-18
CDD 218 533 316 0.0
SUPERFAMILY 227 534 308 1.88E-104
SMART 246 522 277 3.0E-127
PRINTS 278 305 28 2.3E-68
Pfam 278 471 194 6.1E-33
PRINTS 308 335 28 2.3E-68
PRINTS 341 365 25 2.3E-68
PRINTS 375 401 27 2.3E-68
PRINTS 405 432 28 2.3E-68
PRINTS 461 481 21 2.3E-68
PRINTS 483 499 17 2.3E-68

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Phosphoprotein phosphatase activity Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0170500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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