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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212500 |
| Transcript ID | LotjaGi6g1v0212500.2 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51021891..51034172) extracted from Lotus japonicus Gifu genome v1.2.
GAGGTTCCTTTCCTCCTATGGTCACACTTGTGTTCTTCTTCTTCTTGTTCGAACGGGACAAAAATTCCATCTTTTTCTGC AAATTGAAACCCTCTACAATTTCCCATTATTCCATCGTTTTCTCAATCCAATTCCACCGCAAAGATTCACTCAAAATCGA AACTTTCACTCTGGGTACTCCTTCAATCTATCTTTGATTCGCTGTTTGTTTCCCTTCAAATTCATGCATTGATTGCGTTA ACCTTTTCATCACTGCGTCAATTTGATTGCAACTTTTTGTTTTGCGGTGTCTGTGTTATCAGATGTGGTAAAGTAGTGTT CTTTTCTCACTCTGAACCCTAGTACTAATTTCATCTTCTGTGTTTTTCGGCTTCTTTCTGTGTAGGTGGGTGTGTTTTTG TGAACACACCATACAAATATGGATCAACATGAGGATGAATGCCGCACCGGAGGCGAAAGTAACAGCAAACAAGATGATGA GGTTTGAATCATTCACCTGCTTGTGTGATTGCTAATGACCCATTTTTTGCTGTTTTTTTGTTTACTTCAATTGTTGTTAC TTGTTTCTGTTTTACTTTTTTGGGGCTTTATATGAATATTTGGTATGACTGTATGACTATTATGCATTTATAATTTTGCC CGCGTACTCGGTATGAAAGATGTAGTAATATCTTGTAAGTTACATCAGTGGCATAGGTTATTTAACTATGGTATCGAATA TCGATGTGCTTGCGCGGTTTTATTTTTGCGTCAGCATTTAGTGAGAAAATTATGCAGTGTTCCAATGGTAACTATAATTT TGATGATCAGGTTTTTTCTATGTATGCTTATTTGTGAATGAATGGGTTGTATAGTTTGTATTGGCTTTTAGCTTTACATG GTGAATTAAATGTTGTGTATGAAATCCTTGGGCAGGAAGCCGTTGCTCACCTTGAGGAAATAAAGAAGTCAATTGAGGCG AAGATCGCTTTACGACAAAGCAATTTGAATCCCGACAGGCCCGGTTAGTTATTGTTCCATTTTGTCGTCATTAATTATTA ATATGCGATTCAGTTTTGTCGCTTCTACTAGGAATGGTGAAAACTCTTTAAATTGCTGTAGAATGCAGGGTTACTTGAGC TCTAGCTCAAGTGATTCCAAGCTCTTTAATTGAACACTGGCGATTTTTCTCCATGTTTTCAATCCCAACTAATGAGGAAG TCTTGATTGTTATTGTTTTAACACATGCACTTAGGCTCCTTTGAGCACTGTTTTGTCGTTTCTCTGGTATGTGTACTGTC ATTATTTATTGCATGAATAGTAATACAATTTGCTTACATTGCATGCAGACTCAGGATTTTTAAGGACATTGGATTCTAGT ATTAAGCGCAACACGGCTGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCTGCGTGAAGCACTGATGGACGAGTTACG AACTGTCAACATGAGCAAATTTGTCAGTGAAGCAGTGGCGGCTATATGTGATGCCAAACTTAGGAGTTCTGATATACAAG CAGCAGTCCAGGTGTGTGCTGTGCATTTTTTCCCCTGGTTTCTACACAAAAAGAAATTAATTCCATAGAAGAAAGAATAT CTTTGATTAGTTGCAATAAATGTGCTAAGGGTCCATGAGTTTGTAAGTCGGCAGAGACTATTTGGACCATCCCTCTTTAC TATCCACACCATCCCCTTTTTTTTATAATTCCAAAAATACCCCCCACATAGAAAACAAACAAAGCAGTAAAAAAAATACT CTCACAATCTCACCTTCTTCTTCCTTCTTCCTCTTCCACTCTCACCTTCCCCCATCCCTATTTCATCTTCTAAATCAATA TATATCACACATCTTGAAGCTCCAAATCAGTGTAGAAGATAAGTGGGTGAGATCAAGAGAAGATTAGAAGCTCAAAATAG GTGAGATTTTGGGATTTTTACGGGTTTTTCGCGTAAATCTGGGTTGAATATGTGGGTTCTGATTCGTTCCGCCACTTAAA ATGCGGACGTTTAATTGCTACCGCTATTTTAGTAGCGGTAACTTCCGCTATCTTAATAGCGGTAACTACCGCTATCTTAG TAGCGGTAACTACCGCAATTAAAATAGCTGTAACGTCCGCTATCAAGGTAGCTGTAACTTCCGCTATTTTTGTCTAATGC TCACGTTTGTTGTGTCCGCTATCTTGATAGCGGAAGTTACCGCTATCTTGATAGCGGAAGTTACAGCTATCAAGATAGCG GAAGTTACCGCTATCATGACTGCGGTAGTTACCGCTATCTTGATTGCGGAAGGTTTTGAAACCGTGTGTGGGTTTTTAAG TAAACCAGAGGGAACAACTCAGAGGGACTTACCAGAGTCAAGGTTCCTTCTGAAATCGAGTGTGAGTTTTCCTTCCTCCT CTTTCTTTCTTTCTTCTCCTTCTGAAATCGTGATGGTGATGGACGACGGAGAATGGAGGCTAGGGTTTTGGTGGGGAAGG GTGAAGGACGTGATGGAGGCTGGGATTTTGGTGGGGAAACCGTGAGAGAAGGAGATGAGGAGGAGGAGATGAGGGCCACC GTCAGAATGAGAGAAGGAGATGAGGAGGGGGAGATGCGACCGAGAATGAGAGAGAGGGAGATGGTGGGATTAGGGTTTTT TTTTTAATTGGAGCAGTTATTTTTTAAAATATTTGGGGGTATAAATGTATTTTTGCACTTAAGGGGATGGTGTGGATAGT AAAGAGGGATGGTCCAAATAGTCTCTGCCTTGTAAGTCATACTGTTTGTTTACCTTGCAATTTTTTATTTCATCAATATT CAAATGAACTATGTTATTTGAGTTCAGATTGCTCCAAAAAAGCAAGGATCCTACCACTTAAATTAGTAAAAGTTTTTCAA TTAGACAAACTACATTCACGGGTCTTTTGATTAGAAAGAAGAAAAAAAATGAAAAAATCCTATAGAGATCCGGTATAGAT CTTGAGCACATTTTTCAGTCTTGTCATGAAAAAAAAATGTTCATAGTGTTTTTTAATGATTTAAAAAATATTAGAATTTG AAATAAAATCTCCTGATTATTTGACAAGCTACTTTGAGTAGTTTATAGAAAAAGCTATAATTGGAACTATTTTAAAATAA AAAGTGCTTTTTATAGAACGAACCTAACAAAAAGAGGTTTCAGCTGATATAATATGTCCAAAAAATATATATCATTTTTT ACACAATTTTAAATTCACTTCTTTTTAGATTAGAAAAACAGATCCCAAATTATGTTATGAAATTGTTAAATTGTTTTTTT TAGAAATATCTTTAAATATATACCATAATCTTAGAGGCTGTTGAAAGTAGAAACCATACGGTTTAGGTCATGTACTACTA TTCCTACAATGCTACTAGTGTTACTGTACGTTTACCAGTACAACCCCAAGCTTTCTAATACAAAATGCTCGTAACCCTAT TTTCTGAGTGAGGATCGAAGACTAATGTATACTAGAGATGTATGTCTATTTTCTCTAGTAGTCATTGGTATGACTTTTTA TCCTTGCTGTAGTTGTGTATCTCTTTGAATTCCAATGTTGTTAATTTTTGGCCTGTTATTGCACTATTGTTTTCTTTCCC TTCTTAATTGTTCTGTACTTGTCTTTCTGTTCTTGATACATTTTTCTAGTATGCTATACTTTGATAAACAATTAATTGCA TAGTTTAGCATGTAGGTTATTTTTTTCCACAGAATTTTAAAATTTTCCATTTTTTATGTGACATATACGTTACCTTAAAT ATGTGGCTCCTGATACATGGCCATCACTTGCTTCTTTTTGGAAAGATCTGCTCTTTGCTTCACCAAAGGTACAAGGACTT TGCACCAAGCCTGATTCAAGGACTTCTCAAAATCTTCTCTCCTGGAAAACCTGGTGATGAATCCGATACTGACAAAAACT TGAAGGCAATGAAGAAGCGCAGTAGTCTGAAACTTCTATTGGAACTTTTTTTTGTTGGAGTTATTGAAGATGGCGCCATT TTTATCACTATCATAAAAGACCTTACCAGTGTGGAGCAGCTAAAAGATCGGGATGCTACACAAACAAGTTTGACACTTCT TTCTAGCTTTGCTCGACAAGGGAGGATTTTTCTAGGACTTTCTGTTAATGGACCAGAAATTCATGAAGAGGTATTTCTTT TATTAATTCTTCACTAGTATAACCAGTGCTTTCTCTTATTCATTTTTGGCTAGACTTACTTTTTTGGTTTTCATTAACTT ATTCAATCTCTATTGTGTAGTCATTTTAAATCATGGCTATAAGTTTTGCTCCTGCCATTTTATTATATTATTTTGTGCCA AGGATTGTTCTGTACGCTAGCTGTGTTTTATATTCCTGCACTGACATTCTGATACAGTTTTTTAAAGGTCTTGCCATCAC GGCTGATCAAAAGAAAGTTCTTAGGAAAGCATGTTATGCATTTTATGATGCTGCAGCTGAGCTACTTCAGTCTGAGCATT CTGTAAGAGTTCCAGCCTTTGTAAAATAATTTTTGTCTGTCTTCATGTCCTCTGTTCTGGTTTCTTCTTTCCATCAAATC CTTTGTGCCAATAATTTTGTTTGTCCTTCTGATTAGTGATGGCTTTATATCTTGACAGTCACTTCGAGTAATGGAGCATG AAAATTCTAAGATTTTGAATGCAAAAGGTGAGCTCAGCGAGGAAAATGTTGCTTCATATGAAAAGCTTCGCAAATCCTAT GACCATTTGTACCGTAATGTCTCATCGTAAGTTTCTTTGTTTAGTTTTGACTACTAATATCTACATGTTTAATTAAGTTA TTGTTGATAGACTTAATATATTCTTGCAAAACTACGGACCCCTGTTCAAGGGTTACATATATCGTTGCACATGTATATGT ATATACCCAGCTGTTTGTTCCCTTTGATTCTTCTATCCTGTAATTATGATTGTGTTTTTACAGATTAGCAGAAGCACTTG ATATGCAGCCTCCAGTAATGCCAGAGGATGGACACACAACAAGGGTTACTAGTGGCGAGGAGGCTATTTCTTCTGCTTCT GGGAAAGATTCTTCTGTTGTTGAACCGATATGGGATGATGAAGATACACGGGCTTTCTATGAATGTTTACCCGATCTTAG GTTTGTACTTCTAAGAAACTTCTGTATGTATCACATTGCTACTTGGTCCTTCATAAATTAATTCTTCCACTAGCTCTTGG TCTTTGTACTCTTTCTTGTTTAAAAATTTATATTTGACATAAACATCAACGGTTTCATATTTTTCTCCAGAGCTTTTGTT CCTGCTGTGCTTTTGGGAGAAACGGAACCAAAAAGCAATGAGCAATCTGTAAAAAGTCAAGACCAGTCAACTGTAAGGGA AAAAATTTCAACCTATTTCACAATCTTCTAGTTGTTAGTTTTTGTAGTTTTTGAATTTTTCTTTCCTAATTGGATGAAGG TTACACCTAGATGTACCCAATTCTTATACCTTTAGGTCTTCGTGTTGGGATCATTCATGATTCTCTGAAACCATTCTTGT TGTTCTTTAAATACTTGATGGTAATATTATTCGTTGTTTTCTTATCATGTAGTTATGCAGTTTAATTTCCGTTGAGCATA CACCTAGCAGATTAAGTCTTTAGGAGAGTTGCCCCATGGCAAGAACATAATCCATTCTTTATATATAGCTTGGAATTAGC GATGGTTTCAACTACTTCATAGGTAGCAATGACAGTTGCTGATTCTCATAAAAAACAGCAACCTGGTGCTATGTCCTTGT GATAAAGCGTTGTTGCATTATTGATTGTTTCACTTTTTTTGTATGTAGTTTCCCAGTTTTGGAGAGTATCTTATTGTCTG CATACTCAAACTTCTCCTTTCTGTCTAATGAAATGTTTTTTTCTATATTTGAGCAACTTTAGATACTATTCCATAATTAT TCATGAAAAACTAATATGAAAGTTTTAATCATATAAAACCACGATGTTGGTTTTTTCTTACCAACCTTCTGCAACTGTTC ACTGACTGCAAGTTTGGTGAACTAGGAAATATTGCCTGAATCAGACAAAGGGCAAACCACCCGTGAAAGTGGAGAGGTCT CCACAGACCCTAGTGCTTTGCCAGAGGGAGAAAGCATACAAGGAGTGAAGGGTAAAGAAGAACAAGAGAAGTCTAAAGAA TTGGACCGAGAGAAGGAAAAAGACAAAGAAAAAGACAAGGACAAAGACAAAGAAAAAGACAAGGACAAAGAAAAAGAAAA AGAGAAAGATAATGACAAAAAGGGGGAAAATGAAAAGGACAAACTCAGAAGTCTTGAAGGAACAAACTTGGATGCTCTGT TGCAGAGGCTTCCTGGTTGTGTGAGCCGTGACCTTATAGATCAACTAACTGTGAGAATATCTTATGCAGTTGTTACTTAT CTTAGATTGTATTGTTATTTTTGTCATCATTAATTGTTATTTCCTTTTTGCTTAACACATGTTAGGTGGAGTTCTGTTAT CTAAATTCAAAATCAAATCGGAAAAAGCTCGTGAGGGCATTATTCAGTGTACCAAGGACATCTCTGGAACTACTACCATA TTACTCACGCATGGTTGCCACACTATCCACTTGTATGAAAGACGTCTCTTCAATTCTCTTGCAGATGTTGGAGGAGGAAT TCAACTTCTTAATAAATAAAAAGGTTATTTCATATAATTTTTTATTTCTTGTCACCTTTAAATATTTAGGTGATTACTTA TCTAGTTATTGAAATGTCTTAACAGGACCAGATGAACATTGAGACAAAGATCAAGAATATCAGGTTCATTGGAGAACTTT GCAAGTTCAAGATTGCCCCTGCTGGCCTAGTCTTCAGTTGTTTGAAGGTATAAGAGACTAATAATCAAATTATAAATCAA GGTGTTCCTTTTATCTACGATGACAATTTTCTTAAACTTGCAACTTATGTTTTGGATGTTAGAAATAAGTTAGAACCACA CACCACCACAAAACCTTAGGCTTAAGGCAATGGATGTGTGTGTTCTTTAACTTATATGCTAATCTAGACAATGTGGGACT TCTTTGAGTCACACTTGTTACTACTCTAATATGGAGCCACTCTTATGCTGTCAACACTCAACAGTGTTCAGTTTCACTTG ACTAAAGTCTTGTATTTTTATGCGTTAAGACGTTTAAATTATAATCTCCTTTTCCATTATTTTCTGTATTTTTCTTTCGA TACCTCGGAAAACTTATTTTCTGTTTTTTGTCACATAAGTCTTTTAGGGAATATGCAAATTATATGAAATACAATTTGGT ATGCTCCATTTTTCCACCTTCAAGCCTGTAACTTTTTTTCTTGGATCTAGTAGTAGTACTCTTACCCATCATAGTCTTTC TTCATATGACAAATAGCTCCTTTTTGTTGTATTGGACTAAAATGTGTTCTTTGTACATTTTTTACAATCTGGATTCAGAT GTTGTGCAAGCTTATCTTCTGTACAAGCTTACCTCTTCTTTTAGGAGATTGAATCCTTCATTGACGTTTTCTTGTCATTC CAGGCATGTTTAGATGACTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTCGAAACATGTGGCCGGTTTCTGTA TCGGTCTCCAGAAACTTCTATACGTATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTAAAAAACTTGGATC CTCGACATAGCACTTTGGTAGAGAATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGAGTTGCTAAAGTCCGT CCTCCCTTGCATCAGGTGAAATTCTTATTTCAATTTCTCTATCTCTAATAAGTTTCACAATCTCAGCTAACATTGTAATT GATATCTTTATTGCAGTATATCAGAAAATTACTTTTCTCTGATCTTGATAAATCTACCATTGAGCATGTGCTCCGGCAAC TTCGTAAATTACCATGGAGTGAATGTGAACCATATCTTTTAAAATGCTTCATGAAGGTCTACAAAGGCAAATACGGTCAA ATTCACCTGATTGCATCTCTTGCTGCCGGTTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATAGTTGATGAGGTTAT TATTTTTGATATGTTATTCCTTTCTTTATTTGATATCGCTTCATCATGTAATACCATGATTTGAATTTTGAGGAATGCGC ACCTATTTATTAATAAGCTCTTGTTTTGGTTGCCCAAAACTTTTTTGCATGTAAATTTCTTCACATTGAACAAGAGTGGG CTTTTAATTAGAAGTTACTCACTTGATTTAACATATTCAATTATAACTAAATCACTTTTATGTTTTAAATGATTGAATTT TTGAATTACTATTTCTAGTACTACTATCTACTAGACCTGAGGCAGAAGGAAGTCATTGCAAGTGAATATTTTATAGACAT TTACAAATTGTTATTTTACATTATGATTATTAGGTCCTGGAGGAGATTAGAATTGGGCTTGAACTAAATGACTATGGGAT GCAGCAAAGACGTGTTGCCTATATGCGATTCTTAGGGGAGCTTTACAACTACAAGCATGCAGACTCCTCTGTCATTTTTG AGACACTATATCTCATTCTTGTCTATGGTCACGGGACACCAGAGGTATTATTTTTTTACTGTTAAGTGTTAACTTGTATT TTTTTAAACAGGGAAGACATTAAGCTTTTGTTGTGACATTATGGAATTTGTTTATTCATCCTGCCAGCAAGATGTACTCG ATCCACCTGAAGATTTTTTTCGTATAAGGTTGATCATTACTCTGCTTGAAACTTGTGGGCATTACTTTGACCATGGCTCT TCTAAGAGGAAACTTGATCGATTCTTGATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCACTGCCACTGGATGTCGA ATTTGACTTGCAGGTCAGTCAGGCAGCGTTTATGTTGACTGTATTTCATTATGAGGGTATGATTGATGTGTTAATTTATT TATTTAATGATTTGGATTCCCAACCCTTCTTTATGTTTACTTCAGTGTTCAGTTTGGGCTACTAATCCAGTAGGTTTGGG ATTGCTTTCCAGTGGCTTTTATGTACCTTATTATGTCTTTGGAATTTCATCTTATATAATATATCTTTTCTTAGAATTTT GATTTGCAGAGAGACTAGGTAGCTTTATTCTTTCTTAGTTGACCTTGATTATTCTGGTTGTACACTTGCACTCAGTCAAA AAGATATCTTATTGTTCATATTCTGGTTCTCCGGAAGAAACATTATTTTTTTCTTGTCTATTGTTGTTCTTTATAAGTAC CTATGTTATCCGAGTGACCCTCTTGCCATGCCATACATTTAATTGGTGGGATTAAGTATCAACGTAAAATAGGATCTATC TATAGGACTTACCTGAAGAATCATCTAATTTGGCAATATCCAGTAATAGGATGTGTAGTTGTGTACATATGAGGTGAACT TTGGAACAAAAATATAATTTGCAAGTTATAACCATCTTAAGAATGCAGTAGTTTTTGTTGATAAAACGGTAGCTGCTTTC ATTTACCCCACACTCCCTTTCTCTCTCTCCTCATTCGATTGCCCATGGACTTTTAGTATCTCTTATACAATGCACTTGTT AGCAGACTTCAAAACTGTCATACTAGCCATTATATAATATGCATTTGTTCTTACATTTCATATTTTGGGTTCATTATTTC TTTTGTGTAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTTCGTTACTCTTCTATTGAGGAAGTGAATGCAGCTCTAG TAGAACTTGAGGAGCATGATCGCATTGTTTCTGCTGATAAGGCCAGTGGTGAAAAACAGTCTGAGAAGCCTCCAAGAAGG ACCACTTCCTCCATGGTCGTTGGCAATGGACAAAGCATTGATAATGGTGCAGAGGACAACGGAGTGCAAGATGATGTTAA TGACGGTGAGGCTGATTCAGGTAGCGATGTAATTGATGAGGAAGGACATGATGATGATGGGTTGGATGAGGAGAATCATG ATGATGGGTCTGGGACTGAGGATGAGGATGATGATGAAGGGCCTGGACCTGCTTCTGATGAGGAAGATGAAGTCCATGTA AGACAGAAGGTGACAGAGGTGGACCCTCTGGAAGAAGCCAGTTTTGATCAAGAGCTCAAGGCTGTATTACAGGCAAGGGT TTACATAATTTATTATGCTTGTCCCTTCACTTGTGCTAAGTTTCTACCTTTGTACATGCATACATACATCTGTGCATGCA TGTGTCTGTCTCCTTGTGAATTTTGATTCATTTTCAGAACATCGTAAAACGTTTCCTGGGAACCCTACTTCTAACCTGAT ATGTTGTTATTATGATAAGATAAGATTTGATTTGAGATTTATTTTGTTATGATAAGAAACGTTATGGAAGGCATCTTATC ATGACATCATGTACTAGATAGGGTTGATTTTGTAAATGTTTGAGAATGGCTATGCAACCTATTATTGAGACAGACTAGGA CCCTTGTCTATATATTATACTTTAAGTCATGTGTAAATTGTAATACAATATCAATCAGAAAATCATATTCTTATTACCTA TAGTCCTTTCAACTGATATGATAAAATTTTATTTTTTCCTCTGATCTCGTGCTTTCTTACTGAGCTAGTCTTGTATTAGT TGTACTGAACTTGTACTTGACCCAGATTATTTGTGAAAGTAAAATAGGAGAGGTGTTTTTCTCACAATATTAGAAACTTT TGGAGCCTTATTTGAGAAATATACTGTCTTGTTTCTTCTCTCTTTTCCACCCAATCTATAAGTCCAATGATGTGTTATAA GATAAGATTTTCTTCGGGTGTACCCAATGTCTGGTTGTATTTATAACATTTTCATAGTGCTTGCTCCACAATTTGTGCAG GAGAGTATGGAACAGCGAAGGCTGGAGCTACGAGGCCGTCCTACATTGAATATGATGATTCCAATGAATGTATTTGAGGG ATCTGCCAAGGATCATCACGGGAGAGGAACTGGTGGGGAAAGTGGTGATGAGGCCCTGGATGAGGATACTGATGGAAACA AAGAAGTCCAAGTGAAAGTTCTTGTGAAACGTGGGAACAAGCAACAGACAAAGCAGATGTACATCCCACGCAATTCGTCA CTGGTGCAGAGTACAAAACAGAAAGAAGCAGCCGAACTTCAAGAGAAAGAAGATATTAAGAGGCTTGTCTTGGAGTATAA TGATAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCAACAAACTGGATGCAGAGTGGGGGTTATAGGGGTGGTG GTCGTGGCTACACTTCAGAAGGAACCGGTGGCAGAAGTGGTGGATCACGCCATCGGCATCATTATCCCGGAAGTGGCTTC TACTATAGCAGAAGAAGGTAAAATGATAGTGACTATGGAAAGCAGATATTTTATGCCATCTGCTTCCTCTCAGCATGACA AAAACTTGAAAGCAAGGCTTATCTTAACTTAAGACCTAGCCCTCTCTTTGGCCACTACCCTCTACATTTCAAACGATTCA CGGCAAGAACAAGTCATTTTCACTTACCTTGTTGGTAAGTGGTGATTTTGAACATGGTGTGTTGGAGATGCAGGGGTTGT AAGGTGATGTACACTGTTTTGATTTCCTAACCTAAGCTGACTTGCAGGGTTGTGGATTGTGGGTGTTATGCAGACATGTC GAAGATGGAGTCGTGTGACTATACCCTGTCCTCCAAGCTTAAATTTGTATAGCTATTTGTATGGATATACAAAATCTCTA AATGTAAGGTTTTGGTGGTTTCTTATCAGCCAGGAGGTTGGATCATATTCTGTGAAGGATGAATAGGCAAAATATGTCTT GATGCTTTGTCAACTTATGGAAAAATGTCAAGCATCGGTTTAAGAATAGACCTCACTTGGTCATTGTGACTGAATGTTTC GTTATAGACTGAATTGCTTGAAAGATTAGCTCTTAGAGCTTTGAATTTATATTTATGATGGTATGCAATTAGATACCCTA ATCTTAGGGATCCAATTATAGTAGTAAACAGAAACCTTACCAATAGACTCCTTTCCAACATAAATATTGCTATTTAGAAA TGATGTAATGATTTCTTCAAATATTCCTGGATAGGATTACAATCAATTTCTTTGTTTAGTTTGTTCATGGAAAATCAGAT TGGAGGTAAAGTGCACAGTAGGCTCACAAACCCTAATTTATAGAATTTTAACTTAAAAGGAAGCTACTTTAGCCATATGA ACTTGTAGTAAAAGTTTGAAACTTTGTGCACTCAAACTGGCA
CDS sequence (LotjaGi6g1v0212500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAACATGAGGATGAATGCCGCACCGGAGGCGAAAGTAACAGCAAACAAGATGATGAGGAAGCCGTTGCTCACCT TGAGGAAATAAAGAAGTCAATTGAGGCGAAGATCGCTTTACGACAAAGCAATTTGAATCCCGACAGGCCCGACTCAGGAT TTTTAAGGACATTGGATTCTAGTATTAAGCGCAACACGGCTGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCTGCGT GAAGCACTGATGGACGAGTTACGAACTGTCAACATGAGCAAATTTGTCAGTGAAGCAGTGGCGGCTATATGTGATGCCAA ACTTAGGAGTTCTGATATACAAGCAGCAGTCCAGATCTGCTCTTTGCTTCACCAAAGGTACAAGGACTTTGCACCAAGCC TGATTCAAGGACTTCTCAAAATCTTCTCTCCTGGAAAACCTGGTGATGAATCCGATACTGACAAAAACTTGAAGGCAATG AAGAAGCGCAGTAGTCTGAAACTTCTATTGGAACTTTTTTTTGTTGGAGTTATTGAAGATGGCGCCATTTTTATCACTAT CATAAAAGACCTTACCAGTGTGGAGCAGCTAAAAGATCGGGATGCTACACAAACAAGTTTGACACTTCTTTCTAGCTTTG CTCGACAAGGGAGGATTTTTCTAGGACTTTCTGTTAATGGACCAGAAATTCATGAAGAGTTTTTTAAAGGTCTTGCCATC ACGGCTGATCAAAAGAAAGTTCTTAGGAAAGCATGTTATGCATTTTATGATGCTGCAGCTGAGCTACTTCAGTCTGAGCA TTCTTCACTTCGAGTAATGGAGCATGAAAATTCTAAGATTTTGAATGCAAAAGGTGAGCTCAGCGAGGAAAATGTTGCTT CATATGAAAAGCTTCGCAAATCCTATGACCATTTGTACCGTAATGTCTCATCATTAGCAGAAGCACTTGATATGCAGCCT CCAGTAATGCCAGAGGATGGACACACAACAAGGGTTACTAGTGGCGAGGAGGCTATTTCTTCTGCTTCTGGGAAAGATTC TTCTGTTGTTGAACCGATATGGGATGATGAAGATACACGGGCTTTCTATGAATGTTTACCCGATCTTAGAGCTTTTGTTC CTGCTGTGCTTTTGGGAGAAACGGAACCAAAAAGCAATGAGCAATCTGTAAAAAGTCAAGACCAGTCAACTGAAATATTG CCTGAATCAGACAAAGGGCAAACCACCCGTGAAAGTGGAGAGGTCTCCACAGACCCTAGTGCTTTGCCAGAGGGAGAAAG CATACAAGGAGTGAAGGGTAAAGAAGAACAAGAGAAGTCTAAAGAATTGGACCGAGAGAAGGAAAAAGACAAAGAAAAAG ACAAGGACAAAGACAAAGAAAAAGACAAGGACAAAGAAAAAGAAAAAGAGAAAGATAATGACAAAAAGGGGGAAAATGAA AAGGACAAACTCAGAAGTCTTGAAGGAACAAACTTGGATGCTCTGTTGCAGAGGCTTCCTGGTTGTGTGAGCCGTGACCT TATAGATCAACTAACTGTGGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTCGTGAGGGCATTATTCAGTG TACCAAGGACATCTCTGGAACTACTACCATATTACTCACGCATGGTTGCCACACTATCCACTTGTATGAAAGACGTCTCT TCAATTCTCTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGACCAGATGAACATTGAGACAAAGAT CAAGAATATCAGGTTCATTGGAGAACTTTGCAAGTTCAAGATTGCCCCTGCTGGCCTAGTCTTCAGTTGTTTGAAGGCAT GTTTAGATGACTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTCGAAACATGTGGCCGGTTTCTGTATCGGTCT CCAGAAACTTCTATACGTATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTAAAAAACTTGGATCCTCGACA TAGCACTTTGGTAGAGAATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGAGTTGCTAAAGTCCGTCCTCCCT TGCATCAGTATATCAGAAAATTACTTTTCTCTGATCTTGATAAATCTACCATTGAGCATGTGCTCCGGCAACTTCGTAAA TTACCATGGAGTGAATGTGAACCATATCTTTTAAAATGCTTCATGAAGGTCTACAAAGGCAAATACGGTCAAATTCACCT GATTGCATCTCTTGCTGCCGGTTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATAGTTGATGAGGTCCTGGAGGAGA TTAGAATTGGGCTTGAACTAAATGACTATGGGATGCAGCAAAGACGTGTTGCCTATATGCGATTCTTAGGGGAGCTTTAC AACTACAAGCATGCAGACTCCTCTGTCATTTTTGAGACACTATATCTCATTCTTGTCTATGGTCACGGGACACCAGAGCA AGATGTACTCGATCCACCTGAAGATTTTTTTCGTATAAGGTTGATCATTACTCTGCTTGAAACTTGTGGGCATTACTTTG ACCATGGCTCTTCTAAGAGGAAACTTGATCGATTCTTGATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCACTGCCA CTGGATGTCGAATTTGACTTGCAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTTCGTTACTCTTCTATTGAGGAAGT GAATGCAGCTCTAGTAGAACTTGAGGAGCATGATCGCATTGTTTCTGCTGATAAGGCCAGTGGTGAAAAACAGTCTGAGA AGCCTCCAAGAAGGACCACTTCCTCCATGGTCGTTGGCAATGGACAAAGCATTGATAATGGTGCAGAGGACAACGGAGTG CAAGATGATGTTAATGACGGTGAGGCTGATTCAGGTAGCGATGTAATTGATGAGGAAGGACATGATGATGATGGGTTGGA TGAGGAGAATCATGATGATGGGTCTGGGACTGAGGATGAGGATGATGATGAAGGGCCTGGACCTGCTTCTGATGAGGAAG ATGAAGTCCATGTAAGACAGAAGGTGACAGAGGTGGACCCTCTGGAAGAAGCCAGTTTTGATCAAGAGCTCAAGGCTGTA TTACAGGAGAGTATGGAACAGCGAAGGCTGGAGCTACGAGGCCGTCCTACATTGAATATGATGATTCCAATGAATGTATT TGAGGGATCTGCCAAGGATCATCACGGGAGAGGAACTGGTGGGGAAAGTGGTGATGAGGCCCTGGATGAGGATACTGATG GAAACAAAGAAGTCCAAGTGAAAGTTCTTGTGAAACGTGGGAACAAGCAACAGACAAAGCAGATGTACATCCCACGCAAT TCGTCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCCGAACTTCAAGAGAAAGAAGATATTAAGAGGCTTGTCTTGGA GTATAATGATAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCAACAAACTGGATGCAGAGTGGGGGTTATAGGG GTGGTGGTCGTGGCTACACTTCAGAAGGAACCGGTGGCAGAAGTGGTGGATCACGCCATCGGCATCATTATCCCGGAAGT GGCTTCTACTATAGCAGAAGAAGGTAA
Protein sequence (LotjaGi6g1v0212500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQHEDECRTGGESNSKQDDEEAVAHLEEIKKSIEAKIALRQSNLNPDRPDSGFLRTLDSSIKRNTAVIKKLKQINEELR EALMDELRTVNMSKFVSEAVAAICDAKLRSSDIQAAVQICSLLHQRYKDFAPSLIQGLLKIFSPGKPGDESDTDKNLKAM KKRSSLKLLLELFFVGVIEDGAIFITIIKDLTSVEQLKDRDATQTSLTLLSSFARQGRIFLGLSVNGPEIHEEFFKGLAI TADQKKVLRKACYAFYDAAAELLQSEHSSLRVMEHENSKILNAKGELSEENVASYEKLRKSYDHLYRNVSSLAEALDMQP PVMPEDGHTTRVTSGEEAISSASGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKSNEQSVKSQDQSTEIL PESDKGQTTRESGEVSTDPSALPEGESIQGVKGKEEQEKSKELDREKEKDKEKDKDKDKEKDKDKEKEKEKDNDKKGENE KDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVS SILLQMLEEEFNFLINKKDQMNIETKIKNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRS PETSIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRK LPWSECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRIGLELNDYGMQQRRVAYMRFLGELY NYKHADSSVIFETLYLILVYGHGTPEQDVLDPPEDFFRIRLIITLLETCGHYFDHGSSKRKLDRFLIHFQRYILSKGALP LDVEFDLQDLFVDLRPNMVRYSSIEEVNAALVELEEHDRIVSADKASGEKQSEKPPRRTTSSMVVGNGQSIDNGAEDNGV QDDVNDGEADSGSDVIDEEGHDDDGLDEENHDDGSGTEDEDDDEGPGPASDEEDEVHVRQKVTEVDPLEEASFDQELKAV LQESMEQRRLELRGRPTLNMMIPMNVFEGSAKDHHGRGTGGESGDEALDEDTDGNKEVQVKVLVKRGNKQQTKQMYIPRN SSLVQSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLGTQPTNWMQSGGYRGGGRGYTSEGTGGRSGGSRHRHHYPGS GFYYSRRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 167 | 167 | - | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 4 | 463 | 460 | 0.0 | ||
| PANTHER | 4 | 463 | 460 | 0.0 | – | |
| Gene3D | 13 | 324 | 312 | 1.4E-78 | ||
| Coils | 17 | 37 | 21 | - | – | |
| Coils | 62 | 89 | 28 | - | – | |
| SMART | 62 | 284 | 223 | 0.12 | ||
| SUPERFAMILY | 81 | 195 | 115 | 5.95E-10 | ||
| Phobius | 168 | 188 | 21 | - | – | |
| Phobius | 189 | 1208 | 1020 | - | – | |
| MobiDBLite | 316 | 346 | 31 | - | – | |
| MobiDBLite | 382 | 403 | 22 | - | – | |
| MobiDBLite | 382 | 484 | 103 | - | – | |
| MobiDBLite | 429 | 484 | 56 | - | – | |
| Coils | 433 | 453 | 21 | - | – | |
| Gene3D | 445 | 689 | 245 | 1.2E-37 | ||
| PANTHER | 457 | 1204 | 748 | 0.0 | – | |
| PANTHER | 457 | 1204 | 748 | 0.0 | ||
| SUPERFAMILY | 490 | 684 | 195 | 1.44E-55 | ||
| SMART | 493 | 681 | 189 | 2.0E-48 | ||
| Pfam | 496 | 680 | 185 | 5.9E-32 | ||
| Coils | 564 | 584 | 21 | - | – | |
| SUPERFAMILY | 691 | 916 | 226 | 1.73E-64 | ||
| Gene3D | 691 | 921 | 231 | 1.8E-92 | ||
| SMART | 696 | 897 | 202 | 1.6E-41 | ||
| Pfam | 698 | 891 | 194 | 3.1E-39 | ||
| MobiDBLite | 922 | 936 | 15 | - | – | |
| MobiDBLite | 922 | 1033 | 112 | - | – | |
| MobiDBLite | 937 | 956 | 20 | - | – | |
| MobiDBLite | 959 | 1010 | 52 | - | – | |
| Pfam | 1011 | 1147 | 137 | 6.3E-36 | ||
| MobiDBLite | 1011 | 1033 | 23 | - | – | |
| MobiDBLite | 1070 | 1084 | 15 | - | – | |
| MobiDBLite | 1070 | 1092 | 23 | - | – | |
| MobiDBLite | 1154 | 1208 | 55 | - | – | |
| MobiDBLite | 1190 | 1208 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0212500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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