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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212500 |
| Transcript ID | LotjaGi6g1v0212500.3 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51022792..51032746) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACGAGTTACGAACTGTCAACATGAGCAAATTTGTCAGTGAAGCAGTGGCGGCTATATGTGATGCCAAACTTAGGAG TTCTGATATACAAGCAGCAGTCCAGGTGTGTGCTGTGCATTTTTTCCCCTGGTTTCTACACAAAAAGAAATTAATTCCAT AGAAGAAAGAATATCTTTGATTAGTTGCAATAAATGTGCTAAGGGTCCATGAGTTTGTAAGTCGGCAGAGACTATTTGGA CCATCCCTCTTTACTATCCACACCATCCCCTTTTTTTTATAATTCCAAAAATACCCCCCACATAGAAAACAAACAAAGCA GTAAAAAAAATACTCTCACAATCTCACCTTCTTCTTCCTTCTTCCTCTTCCACTCTCACCTTCCCCCATCCCTATTTCAT CTTCTAAATCAATATATATCACACATCTTGAAGCTCCAAATCAGTGTAGAAGATAAGTGGGTGAGATCAAGAGAAGATTA GAAGCTCAAAATAGGTGAGATTTTGGGATTTTTACGGGTTTTTCGCGTAAATCTGGGTTGAATATGTGGGTTCTGATTCG TTCCGCCACTTAAAATGCGGACGTTTAATTGCTACCGCTATTTTAGTAGCGGTAACTTCCGCTATCTTAATAGCGGTAAC TACCGCTATCTTAGTAGCGGTAACTACCGCAATTAAAATAGCTGTAACGTCCGCTATCAAGGTAGCTGTAACTTCCGCTA TTTTTGTCTAATGCTCACGTTTGTTGTGTCCGCTATCTTGATAGCGGAAGTTACCGCTATCTTGATAGCGGAAGTTACAG CTATCAAGATAGCGGAAGTTACCGCTATCATGACTGCGGTAGTTACCGCTATCTTGATTGCGGAAGGTTTTGAAACCGTG TGTGGGTTTTTAAGTAAACCAGAGGGAACAACTCAGAGGGACTTACCAGAGTCAAGGTTCCTTCTGAAATCGAGTGTGAG TTTTCCTTCCTCCTCTTTCTTTCTTTCTTCTCCTTCTGAAATCGTGATGGTGATGGACGACGGAGAATGGAGGCTAGGGT TTTGGTGGGGAAGGGTGAAGGACGTGATGGAGGCTGGGATTTTGGTGGGGAAACCGTGAGAGAAGGAGATGAGGAGGAGG AGATGAGGGCCACCGTCAGAATGAGAGAAGGAGATGAGGAGGGGGAGATGCGACCGAGAATGAGAGAGAGGGAGATGGTG GGATTAGGGTTTTTTTTTTAATTGGAGCAGTTATTTTTTAAAATATTTGGGGGTATAAATGTATTTTTGCACTTAAGGGG ATGGTGTGGATAGTAAAGAGGGATGGTCCAAATAGTCTCTGCCTTGTAAGTCATACTGTTTGTTTACCTTGCAATTTTTT ATTTCATCAATATTCAAATGAACTATGTTATTTGAGTTCAGATTGCTCCAAAAAAGCAAGGATCCTACCACTTAAATTAG TAAAAGTTTTTCAATTAGACAAACTACATTCACGGGTCTTTTGATTAGAAAGAAGAAAAAAAATGAAAAAATCCTATAGA GATCCGGTATAGATCTTGAGCACATTTTTCAGTCTTGTCATGAAAAAAAAATGTTCATAGTGTTTTTTAATGATTTAAAA AATATTAGAATTTGAAATAAAATCTCCTGATTATTTGACAAGCTACTTTGAGTAGTTTATAGAAAAAGCTATAATTGGAA CTATTTTAAAATAAAAAGTGCTTTTTATAGAACGAACCTAACAAAAAGAGGTTTCAGCTGATATAATATGTCCAAAAAAT ATATATCATTTTTTACACAATTTTAAATTCACTTCTTTTTAGATTAGAAAAACAGATCCCAAATTATGTTATGAAATTGT TAAATTGTTTTTTTTAGAAATATCTTTAAATATATACCATAATCTTAGAGGCTGTTGAAAGTAGAAACCATACGGTTTAG GTCATGTACTACTATTCCTACAATGCTACTAGTGTTACTGTACGTTTACCAGTACAACCCCAAGCTTTCTAATACAAAAT GCTCGTAACCCTATTTTCTGAGTGAGGATCGAAGACTAATGTATACTAGAGATGTATGTCTATTTTCTCTAGTAGTCATT GGTATGACTTTTTATCCTTGCTGTAGTTGTGTATCTCTTTGAATTCCAATGTTGTTAATTTTTGGCCTGTTATTGCACTA TTGTTTTCTTTCCCTTCTTAATTGTTCTGTACTTGTCTTTCTGTTCTTGATACATTTTTCTAGTATGCTATACTTTGATA AACAATTAATTGCATAGTTTAGCATGTAGGTTATTTTTTTCCACAGAATTTTAAAATTTTCCATTTTTTATGTGACATAT ACGTTACCTTAAATATGTGGCTCCTGATACATGGCCATCACTTGCTTCTTTTTGGAAAGATCTGCTCTTTGCTTCACCAA AGGTACAAGGACTTTGCACCAAGCCTGATTCAAGGACTTCTCAAAATCTTCTCTCCTGGAAAACCTGGTGATGAATCCGA TACTGACAAAAACTTGAAGGCAATGAAGAAGCGCAGTAGTCTGAAACTTCTATTGGAACTTTTTTTTGTTGGAGTTATTG AAGATGGCGCCATTTTTATCACTATCATAAAAGACCTTACCAGTGTGGAGCAGCTAAAAGATCGGGATGCTACACAAACA AGTTTGACACTTCTTTCTAGCTTTGCTCGACAAGGGAGGATTTTTCTAGGACTTTCTGTTAATGGACCAGAAATTCATGA AGAGGTATTTCTTTTATTAATTCTTCACTAGTATAACCAGTGCTTTCTCTTATTCATTTTTGGCTAGACTTACTTTTTTG GTTTTCATTAACTTATTCAATCTCTATTGTGTAGTCATTTTAAATCATGGCTATAAGTTTTGCTCCTGCCATTTTATTAT ATTATTTTGTGCCAAGGATTGTTCTGTACGCTAGCTGTGTTTTATATTCCTGCACTGACATTCTGATACAGTTTTTTAAA GGTCTTGCCATCACGGCTGATCAAAAGAAAGTTCTTAGGAAAGCATGTTATGCATTTTATGATGCTGCAGCTGAGCTACT TCAGTCTGAGCATTCTGTAAGAGTTCCAGCCTTTGTAAAATAATTTTTGTCTGTCTTCATGTCCTCTGTTCTGGTTTCTT CTTTCCATCAAATCCTTTGTGCCAATAATTTTGTTTGTCCTTCTGATTAGTGATGGCTTTATATCTTGACAGTCACTTCG AGTAATGGAGCATGAAAATTCTAAGATTTTGAATGCAAAAGGTGAGCTCAGCGAGGAAAATGTTGCTTCATATGAAAAGC TTCGCAAATCCTATGACCATTTGTACCGTAATGTCTCATCGTAAGTTTCTTTGTTTAGTTTTGACTACTAATATCTACAT GTTTAATTAAGTTATTGTTGATAGACTTAATATATTCTTGCAAAACTACGGACCCCTGTTCAAGGGTTACATATATCGTT GCACATGTATATGTATATACCCAGCTGTTTGTTCCCTTTGATTCTTCTATCCTGTAATTATGATTGTGTTTTTACAGATT AGCAGAAGCACTTGATATGCAGCCTCCAGTAATGCCAGAGGATGGACACACAACAAGGGTTACTAGTGGCGAGGAGGCTA TTTCTTCTGCTTCTGGGAAAGATTCTTCTGTTGTTGAACCGATATGGGATGATGAAGATACACGGGCTTTCTATGAATGT TTACCCGATCTTAGGTTTGTACTTCTAAGAAACTTCTGTATGTATCACATTGCTACTTGGTCCTTCATAAATTAATTCTT CCACTAGCTCTTGGTCTTTGTACTCTTTCTTGTTTAAAAATTTATATTTGACATAAACATCAACGGTTTCATATTTTTCT CCAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACGGAACCAAAAAGCAATGAGCAATCTGTAAAAAGTCAAGACCAG TCAACTGTAAGGGAAAAAATTTCAACCTATTTCACAATCTTCTAGTTGTTAGTTTTTGTAGTTTTTGAATTTTTCTTTCC TAATTGGATGAAGGTTACACCTAGATGTACCCAATTCTTATACCTTTAGGTCTTCGTGTTGGGATCATTCATGATTCTCT GAAACCATTCTTGTTGTTCTTTAAATACTTGATGGTAATATTATTCGTTGTTTTCTTATCATGTAGTTATGCAGTTTAAT TTCCGTTGAGCATACACCTAGCAGATTAAGTCTTTAGGAGAGTTGCCCCATGGCAAGAACATAATCCATTCTTTATATAT AGCTTGGAATTAGCGATGGTTTCAACTACTTCATAGGTAGCAATGACAGTTGCTGATTCTCATAAAAAACAGCAACCTGG TGCTATGTCCTTGTGATAAAGCGTTGTTGCATTATTGATTGTTTCACTTTTTTTGTATGTAGTTTCCCAGTTTTGGAGAG TATCTTATTGTCTGCATACTCAAACTTCTCCTTTCTGTCTAATGAAATGTTTTTTTCTATATTTGAGCAACTTTAGATAC TATTCCATAATTATTCATGAAAAACTAATATGAAAGTTTTAATCATATAAAACCACGATGTTGGTTTTTTCTTACCAACC TTCTGCAACTGTTCACTGACTGCAAGTTTGGTGAACTAGGAAATATTGCCTGAATCAGACAAAGGGCAAACCACCCGTGA AAGTGGAGAGGTCTCCACAGACCCTAGTGCTTTGCCAGAGGGAGAAAGCATACAAGGAGTGAAGGGTAAAGAAGAACAAG AGAAGTCTAAAGAATTGGACCGAGAGAAGGAAAAAGACAAAGAAAAAGACAAGGACAAAGACAAAGAAAAAGACAAGGAC AAAGAAAAAGAAAAAGAGAAAGATAATGACAAAAAGGGGGAAAATGAAAAGGACAAACTCAGAAGTCTTGAAGGAACAAA CTTGGATGCTCTGTTGCAGAGGCTTCCTGGTTGTGTGAGCCGTGACCTTATAGATCAACTAACTGTGAGAATATCTTATG CAGTTGTTACTTATCTTAGATTGTATTGTTATTTTTGTCATCATTAATTGTTATTTCCTTTTTGCTTAACACATGTTAGG TGGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTCGTGAGGGCATTATTCAGTGTACCAAGGACATCTCTG GAACTACTACCATATTACTCACGCATGGTTGCCACACTATCCACTTGTATGAAAGACGTCTCTTCAATTCTCTTGCAGAT GTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGTTATTTCATATAATTTTTTATTTCTTGTCACCTTTAAATATT TAGGTGATTACTTATCTAGTTATTGAAATGTCTTAACAGGACCAGATGAACATTGAGACAAAGATCAAGAATATCAGGTT CATTGGAGAACTTTGCAAGTTCAAGATTGCCCCTGCTGGCCTAGTCTTCAGTTGTTTGAAGGTATAAGAGACTAATAATC AAATTATAAATCAAGGTGTTCCTTTTATCTACGATGACAATTTTCTTAAACTTGCAACTTATGTTTTGGATGTTAGAAAT AAGTTAGAACCACACACCACCACAAAACCTTAGGCTTAAGGCAATGGATGTGTGTGTTCTTTAACTTATATGCTAATCTA GACAATGTGGGACTTCTTTGAGTCACACTTGTTACTACTCTAATATGGAGCCACTCTTATGCTGTCAACACTCAACAGTG TTCAGTTTCACTTGACTAAAGTCTTGTATTTTTATGCGTTAAGACGTTTAAATTATAATCTCCTTTTCCATTATTTTCTG TATTTTTCTTTCGATACCTCGGAAAACTTATTTTCTGTTTTTTGTCACATAAGTCTTTTAGGGAATATGCAAATTATATG AAATACAATTTGGTATGCTCCATTTTTCCACCTTCAAGCCTGTAACTTTTTTTCTTGGATCTAGTAGTAGTACTCTTACC CATCATAGTCTTTCTTCATATGACAAATAGCTCCTTTTTGTTGTATTGGACTAAAATGTGTTCTTTGTACATTTTTTACA ATCTGGATTCAGATGTTGTGCAAGCTTATCTTCTGTACAAGCTTACCTCTTCTTTTAGGAGATTGAATCCTTCATTGACG TTTTCTTGTCATTCCAGGCATGTTTAGATGACTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTCGAAACATGT GGCCGGTTTCTGTATCGGTCTCCAGAAACTTCTATACGTATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGT AAAAAACTTGGATCCTCGACATAGCACTTTGGTAGAGAATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGAG TTGCTAAAGTCCGTCCTCCCTTGCATCAGGTGAAATTCTTATTTCAATTTCTCTATCTCTAATAAGTTTCACAATCTCAG CTAACATTGTAATTGATATCTTTATTGCAGTATATCAGAAAATTACTTTTCTCTGATCTTGATAAATCTACCATTGAGCA TGTGCTCCGGCAACTTCGTAAATTACCATGGAGTGAATGTGAACCATATCTTTTAAAATGCTTCATGAAGGTCTACAAAG GCAAATACGGTCAAATTCACCTGATTGCATCTCTTGCTGCCGGTTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATA GTTGATGAGGTTATTATTTTTGATATGTTATTCCTTTCTTTATTTGATATCGCTTCATCATGTAATACCATGATTTGAAT TTTGAGGAATGCGCACCTATTTATTAATAAGCTCTTGTTTTGGTTGCCCAAAACTTTTTTGCATGTAAATTTCTTCACAT TGAACAAGAGTGGGCTTTTAATTAGAAGTTACTCACTTGATTTAACATATTCAATTATAACTAAATCACTTTTATGTTTT AAATGATTGAATTTTTGAATTACTATTTCTAGTACTACTATCTACTAGACCTGAGGCAGAAGGAAGTCATTGCAAGTGAA TATTTTATAGACATTTACAAATTGTTATTTTACATTATGATTATTAGGTCCTGGAGGAGATTAGAATTGGGCTTGAACTA AATGACTATGGGATGCAGCAAAGACGTGTTGCCTATATGCGATTCTTAGGGGAGCTTTACAACTACAAGCATGCAGACTC CTCTGTCATTTTTGAGACACTATATCTCATTCTTGTCTATGGTCACGGGACACCAGAGGTATTATTTTTTTACTGTTAAG TGTTAACTTGTATTTTTTTAAACAGGGAAGACATTAAGCTTTTGTTGTGACATTATGGAATTTGTTTATTCATCCTGCCA GCAAGATGTACTCGATCCACCTGAAGATTTTTTTCGTATAAGGTTGATCATTACTCTGCTTGAAACTTGTGGGCATTACT TTGACCATGGCTCTTCTAAGAGGAAACTTGATCGATTCTTGATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCACTG CCACTGGATGTCGAATTTGACTTGCAGGTCAGTCAGGCAGCGTTTATGTTGACTGTATTTCATTATGAGGGTATGATTGA TGTGTTAATTTATTTATTTAATGATTTGGATTCCCAACCCTTCTTTATGTTTACTTCAGTGTTCAGTTTGGGCTACTAAT CCAGTAGGTTTGGGATTGCTTTCCAGTGGCTTTTATGTACCTTATTATGTCTTTGGAATTTCATCTTATATAATATATCT TTTCTTAGAATTTTGATTTGCAGAGAGACTAGGTAGCTTTATTCTTTCTTAGTTGACCTTGATTATTCTGGTTGTACACT TGCACTCAGTCAAAAAGATATCTTATTGTTCATATTCTGGTTCTCCGGAAGAAACATTATTTTTTTCTTGTCTATTGTTG TTCTTTATAAGTACCTATGTTATCCGAGTGACCCTCTTGCCATGCCATACATTTAATTGGTGGGATTAAGTATCAACGTA AAATAGGATCTATCTATAGGACTTACCTGAAGAATCATCTAATTTGGCAATATCCAGTAATAGGATGTGTAGTTGTGTAC ATATGAGGTGAACTTTGGAACAAAAATATAATTTGCAAGTTATAACCATCTTAAGAATGCAGTAGTTTTTGTTGATAAAA CGGTAGCTGCTTTCATTTACCCCACACTCCCTTTCTCTCTCTCCTCATTCGATTGCCCATGGACTTTTAGTATCTCTTAT ACAATGCACTTGTTAGCAGACTTCAAAACTGTCATACTAGCCATTATATAATATGCATTTGTTCTTACATTTCATATTTT GGGTTCATTATTTCTTTTGTGTAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTTCGTTACTCTTCTATTGAGGAAGT GAATGCAGCTCTAGTAGAACTTGAGGAGCATGATCGCATTGTTTCTGCTGATAAGGCCAGTGGTGAAAAACAGTCTGAGA AGCCTCCAAGAAGGACCACTTCCTCCATGGTCGTTGGCAATGGACAAAGCATTGATAATGGTGCAGAGGACAACGGAGTG CAAGATGATGTTAATGACGGTGAGGCTGATTCAGGTAGCGATGTAATTGATGAGGAAGGACATGATGATGATGGGTTGGA TGAGGAGAATCATGATGATGGGTCTGGGACTGAGGATGAGGATGATGATGAAGGGCCTGGACCTGCTTCTGATGAGGAAG ATGAAGTCCATGTAAGACAGAAGGTGACAGAGGTGGACCCTCTGGAAGAAGCCAGTTTTGATCAAGAGCTCAAGGCTGTA TTACAGGCAAGGGTTTACATAATTTATTATGCTTGTCCCTTCACTTGTGCTAAGTTTCTACCTTTGTACATGCATACATA CATCTGTGCATGCATGTGTCTGTCTCCTTGTGAATTTTGATTCATTTTCAGAACATCGTAAAACGTTTCCTGGGAACCCT ACTTCTAACCTGATATGTTGTTATTATGATAAGATAAGATTTGATTTGAGATTTATTTTGTTATGATAAGAAACGTTATG GAAGGCATCTTATCATGACATCATGTACTAGATAGGGTTGATTTTGTAAATGTTTGAGAATGGCTATGCAACCTATTATT GAGACAGACTAGGACCCTTGTCTATATATTATACTTTAAGTCATGTGTAAATTGTAATACAATATCAATCAGAAAATCAT ATTCTTATTACCTATAGTCCTTTCAACTGATATGATAAAATTTTATTTTTTCCTCTGATCTCGTGCTTTCTTACTGAGCT AGTCTTGTATTAGTTGTACTGAACTTGTACTTGACCCAGATTATTTGTGAAAGTAAAATAGGAGAGGTGTTTTTCTCACA ATATTAGAAACTTTTGGAGCCTTATTTGAGAAATATACTGTCTTGTTTCTTCTCTCTTTTCCACCCAATCTATAAGTCCA ATGATGTGTTATAAGATAAGATTTTCTTCGGGTGTACCCAATGTCTGGTTGTATTTATAACATTTTCATAGTGCTTGCTC CACAATTTGTGCAGGAGAGTATGGAACAGCGAAGGCTGGAGCTACGAGGCCGTCCTACATTGAATATGATGATTCCAATG AATGTATTTGAGGGATCTGCCAAGGATCATCACGGGAGAGGAACTGGTGGGGAAAGTGGTGATGAGGCCCTGGATGAGGA TACTGATGGAAACAAAGAAGTCCAAGTGAAAGTTCTTGTGAAACGTGGGAACAAGCAACAGACAAAGCAGATGTACATCC CACGCAATTCGTCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCCGAACTTCAAGAGAAAGAAGATATTAAGAGGCTT GTCTTGGAGTATAATGATAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCAACAAACTGGATGCAGAGTGGGGG TTATAGGGGTGGTGGTCGTGGCTACACTTCAGAAGGAACCGGTGGCAGAAGTGGTGGATCACGCCATCGGCATCATTATC CCGGAAGTGGCTTCTACTATAGCAGAAGAAGGTAA
CDS sequence (LotjaGi6g1v0212500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGAGTTACGAACTGTCAACATGAGCAAATTTGTCAGTGAAGCAGTGGCGGCTATATGTGATGCCAAACTTAGGAG TTCTGATATACAAGCAGCAGTCCAGATCTGCTCTTTGCTTCACCAAAGGTACAAGGACTTTGCACCAAGCCTGATTCAAG GACTTCTCAAAATCTTCTCTCCTGGAAAACCTGGTGATGAATCCGATACTGACAAAAACTTGAAGGCAATGAAGAAGCGC AGTAGTCTGAAACTTCTATTGGAACTTTTTTTTGTTGGAGTTATTGAAGATGGCGCCATTTTTATCACTATCATAAAAGA CCTTACCAGTGTGGAGCAGCTAAAAGATCGGGATGCTACACAAACAAGTTTGACACTTCTTTCTAGCTTTGCTCGACAAG GGAGGATTTTTCTAGGACTTTCTGTTAATGGACCAGAAATTCATGAAGAGTTTTTTAAAGGTCTTGCCATCACGGCTGAT CAAAAGAAAGTTCTTAGGAAAGCATGTTATGCATTTTATGATGCTGCAGCTGAGCTACTTCAGTCTGAGCATTCTTCACT TCGAGTAATGGAGCATGAAAATTCTAAGATTTTGAATGCAAAAGGTGAGCTCAGCGAGGAAAATGTTGCTTCATATGAAA AGCTTCGCAAATCCTATGACCATTTGTACCGTAATGTCTCATCATTAGCAGAAGCACTTGATATGCAGCCTCCAGTAATG CCAGAGGATGGACACACAACAAGGGTTACTAGTGGCGAGGAGGCTATTTCTTCTGCTTCTGGGAAAGATTCTTCTGTTGT TGAACCGATATGGGATGATGAAGATACACGGGCTTTCTATGAATGTTTACCCGATCTTAGAGCTTTTGTTCCTGCTGTGC TTTTGGGAGAAACGGAACCAAAAAGCAATGAGCAATCTGTAAAAAGTCAAGACCAGTCAACTGAAATATTGCCTGAATCA GACAAAGGGCAAACCACCCGTGAAAGTGGAGAGGTCTCCACAGACCCTAGTGCTTTGCCAGAGGGAGAAAGCATACAAGG AGTGAAGGGTAAAGAAGAACAAGAGAAGTCTAAAGAATTGGACCGAGAGAAGGAAAAAGAGAAAGATAATGACAAAAAGG GGGAAAATGAAAAGGACAAACTCAGAAGTCTTGAAGGAACAAACTTGGATGCTCTGTTGCAGAGGCTTCCTGGTTGTGTG AGCCGTGACCTTATAGATCAACTAACTGTGGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTCGTGAGGGC ATTATTCAGTGTACCAAGGACATCTCTGGAACTACTACCATATTACTCACGCATGGTTGCCACACTATCCACTTGTATGA AAGACGTCTCTTCAATTCTCTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGACCAGATGAACATT GAGACAAAGATCAAGAATATCAGGTTCATTGGAGAACTTTGCAAGTTCAAGATTGCCCCTGCTGGCCTAGTCTTCAGTTG TTTGAAGGCATGTTTAGATGACTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTCGAAACATGTGGCCGGTTTC TGTATCGGTCTCCAGAAACTTCTATACGTATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTAAAAAACTTG GATCCTCGACATAGCACTTTGGTAGAGAATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGAGTTGCTAAAGT CCGTCCTCCCTTGCATCAGTATATCAGAAAATTACTTTTCTCTGATCTTGATAAATCTACCATTGAGCATGTGCTCCGGC AACTTCGTAAATTACCATGGAGTGAATGTGAACCATATCTTTTAAAATGCTTCATGAAGGTCTACAAAGGCAAATACGGT CAAATTCACCTGATTGCATCTCTTGCTGCCGGTTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATAGTTGATGAGGT CCTGGAGGAGATTAGAATTGGGCTTGAACTAAATGACTATGGGATGCAGCAAAGACGTGTTGCCTATATGCGATTCTTAG GGGAGCTTTACAACTACAAGCATGCAGACTCCTCTGTCATTTTTGAGACACTATATCTCATTCTTGTCTATGGTCACGGG ACACCAGAGCAAGATGTACTCGATCCACCTGAAGATTTTTTTCGTATAAGGTTGATCATTACTCTGCTTGAAACTTGTGG GCATTACTTTGACCATGGCTCTTCTAAGAGGAAACTTGATCGATTCTTGATACACTTCCAGAGGTATATTTTAAGCAAAG GTGCACTGCCACTGGATGTCGAATTTGACTTGCAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTTCGTTACTCTTCT ATTGAGGAAGTGAATGCAGCTCTAGTAGAACTTGAGGAGCATGATCGCATTGTTTCTGCTGATAAGGCCAGTGGTGAAAA ACAGTCTGAGAAGCCTCCAAGAAGGACCACTTCCTCCATGGTCGTTGGCAATGGACAAAGCATTGATAATGGTGCAGAGG ACAACGGAGTGCAAGATGATGTTAATGACGGTGAGGCTGATTCAGGTAGCGATGTAATTGATGAGGAAGGACATGATGAT GATGGGTTGGATGAGGAGAATCATGATGATGGGTCTGGGACTGAGGATGAGGATGATGATGAAGGGCCTGGACCTGCTTC TGATGAGGAAGATGAAGTCCATGTAAGACAGAAGGTGACAGAGGTGGACCCTCTGGAAGAAGCCAGTTTTGATCAAGAGC TCAAGGCTGTATTACAGGAGAGTATGGAACAGCGAAGGCTGGAGCTACGAGGCCGTCCTACATTGAATATGATGATTCCA ATGAATGTATTTGAGGGATCTGCCAAGGATCATCACGGGAGAGGAACTGGTGGGGAAAGTGGTGATGAGGCCCTGGATGA GGATACTGATGGAAACAAAGAAGTCCAAGTGAAAGTTCTTGTGAAACGTGGGAACAAGCAACAGACAAAGCAGATGTACA TCCCACGCAATTCGTCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCCGAACTTCAAGAGAAAGAAGATATTAAGAGG CTTGTCTTGGAGTATAATGATAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCAACAAACTGGATGCAGAGTGG GGGTTATAGGGGTGGTGGTCGTGGCTACACTTCAGAAGGAACCGGTGGCAGAAGTGGTGGATCACGCCATCGGCATCATT ATCCCGGAAGTGGCTTCTACTATAGCAGAAGAAGGTAA
Protein sequence (LotjaGi6g1v0212500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDELRTVNMSKFVSEAVAAICDAKLRSSDIQAAVQICSLLHQRYKDFAPSLIQGLLKIFSPGKPGDESDTDKNLKAMKKR SSLKLLLELFFVGVIEDGAIFITIIKDLTSVEQLKDRDATQTSLTLLSSFARQGRIFLGLSVNGPEIHEEFFKGLAITAD QKKVLRKACYAFYDAAAELLQSEHSSLRVMEHENSKILNAKGELSEENVASYEKLRKSYDHLYRNVSSLAEALDMQPPVM PEDGHTTRVTSGEEAISSASGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKSNEQSVKSQDQSTEILPES DKGQTTRESGEVSTDPSALPEGESIQGVKGKEEQEKSKELDREKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCV SRDLIDQLTVEFCYLNSKSNRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNI ETKIKNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNL DPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLLKCFMKVYKGKYG QIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRIGLELNDYGMQQRRVAYMRFLGELYNYKHADSSVIFETLYLILVYGHG TPEQDVLDPPEDFFRIRLIITLLETCGHYFDHGSSKRKLDRFLIHFQRYILSKGALPLDVEFDLQDLFVDLRPNMVRYSS IEEVNAALVELEEHDRIVSADKASGEKQSEKPPRRTTSSMVVGNGQSIDNGAEDNGVQDDVNDGEADSGSDVIDEEGHDD DGLDEENHDDGSGTEDEDDDEGPGPASDEEDEVHVRQKVTEVDPLEEASFDQELKAVLQESMEQRRLELRGRPTLNMMIP MNVFEGSAKDHHGRGTGGESGDEALDEDTDGNKEVQVKVLVKRGNKQQTKQMYIPRNSSLVQSTKQKEAAELQEKEDIKR LVLEYNDREEEELNGLGTQPTNWMQSGGYRGGGRGYTSEGTGGRSGGSRHRHHYPGSGFYYSRRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1101 | 1101 | 0.0 | ||
| Gene3D | 1 | 241 | 241 | 2.3E-58 | ||
| PANTHER | 1 | 1101 | 1101 | 0.0 | – | |
| Phobius | 1 | 84 | 84 | - | – | |
| SUPERFAMILY | 3 | 112 | 110 | 6.76E-9 | ||
| Phobius | 85 | 105 | 21 | - | – | |
| Phobius | 106 | 1105 | 1000 | - | – | |
| MobiDBLite | 233 | 263 | 31 | - | – | |
| MobiDBLite | 299 | 381 | 83 | - | – | |
| MobiDBLite | 299 | 320 | 22 | - | – | |
| MobiDBLite | 346 | 381 | 36 | - | – | |
| Coils | 350 | 370 | 21 | - | – | |
| Gene3D | 354 | 587 | 234 | 2.2E-38 | ||
| SUPERFAMILY | 387 | 581 | 195 | 1.36E-55 | ||
| SMART | 390 | 578 | 189 | 2.0E-48 | ||
| Pfam | 393 | 577 | 185 | 5.1E-32 | ||
| Coils | 461 | 481 | 21 | - | – | |
| SUPERFAMILY | 588 | 813 | 226 | 1.25E-64 | ||
| Gene3D | 588 | 818 | 231 | 1.6E-92 | ||
| SMART | 593 | 794 | 202 | 1.6E-41 | ||
| Pfam | 595 | 788 | 194 | 2.7E-39 | ||
| MobiDBLite | 819 | 930 | 112 | - | – | |
| MobiDBLite | 819 | 833 | 15 | - | – | |
| MobiDBLite | 834 | 853 | 20 | - | – | |
| MobiDBLite | 856 | 907 | 52 | - | – | |
| Pfam | 908 | 1044 | 137 | 5.5E-36 | ||
| MobiDBLite | 908 | 930 | 23 | - | – | |
| MobiDBLite | 967 | 981 | 15 | - | – | |
| MobiDBLite | 967 | 989 | 23 | - | – | |
| MobiDBLite | 1051 | 1105 | 55 | - | – | |
| MobiDBLite | 1087 | 1105 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0212500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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