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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212500 |
| Transcript ID | LotjaGi6g1v0212500.4 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51022792..51033145) extracted from Lotus japonicus Gifu genome v1.2.
TCATTAATTATTAATATGCGATTCAGTTTTGTCGCTTCTACTAGGAATGGTGAAAACTCTTTAAATTGCTGTAGAATGCA GGGTTACTTGAGCTCTAGCTCAAGTGATTCCAAGCTCTTTAATTGAACACTGGCGATTTTTCTCCATGTTTTCAATCCCA ACTAATGAGGAAGTCTTGATTGTTATTGTTTTAACACATGCACTTAGGCTCCTTTGAGCACTGTTTTGTCGTTTCTCTGG TATGTGTACTGTCATTATTTATTGCATGAATAGTAATACAATTTGCTTACATTGCATGCAGACTCAGGATTTTTAAGGAC ATTGGATTCTAGTATTAAGCGCAACACGGCTGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCTGCGTGAAGCACTGA TGGACGAGTTACGAACTGTCAACATGAGCAAATTTGTCAGTGAAGCAGTGGCGGCTATATGTGATGCCAAACTTAGGAGT TCTGATATACAAGCAGCAGTCCAGGTGTGTGCTGTGCATTTTTTCCCCTGGTTTCTACACAAAAAGAAATTAATTCCATA GAAGAAAGAATATCTTTGATTAGTTGCAATAAATGTGCTAAGGGTCCATGAGTTTGTAAGTCGGCAGAGACTATTTGGAC CATCCCTCTTTACTATCCACACCATCCCCTTTTTTTTATAATTCCAAAAATACCCCCCACATAGAAAACAAACAAAGCAG TAAAAAAAATACTCTCACAATCTCACCTTCTTCTTCCTTCTTCCTCTTCCACTCTCACCTTCCCCCATCCCTATTTCATC TTCTAAATCAATATATATCACACATCTTGAAGCTCCAAATCAGTGTAGAAGATAAGTGGGTGAGATCAAGAGAAGATTAG AAGCTCAAAATAGGTGAGATTTTGGGATTTTTACGGGTTTTTCGCGTAAATCTGGGTTGAATATGTGGGTTCTGATTCGT TCCGCCACTTAAAATGCGGACGTTTAATTGCTACCGCTATTTTAGTAGCGGTAACTTCCGCTATCTTAATAGCGGTAACT ACCGCTATCTTAGTAGCGGTAACTACCGCAATTAAAATAGCTGTAACGTCCGCTATCAAGGTAGCTGTAACTTCCGCTAT TTTTGTCTAATGCTCACGTTTGTTGTGTCCGCTATCTTGATAGCGGAAGTTACCGCTATCTTGATAGCGGAAGTTACAGC TATCAAGATAGCGGAAGTTACCGCTATCATGACTGCGGTAGTTACCGCTATCTTGATTGCGGAAGGTTTTGAAACCGTGT GTGGGTTTTTAAGTAAACCAGAGGGAACAACTCAGAGGGACTTACCAGAGTCAAGGTTCCTTCTGAAATCGAGTGTGAGT TTTCCTTCCTCCTCTTTCTTTCTTTCTTCTCCTTCTGAAATCGTGATGGTGATGGACGACGGAGAATGGAGGCTAGGGTT TTGGTGGGGAAGGGTGAAGGACGTGATGGAGGCTGGGATTTTGGTGGGGAAACCGTGAGAGAAGGAGATGAGGAGGAGGA GATGAGGGCCACCGTCAGAATGAGAGAAGGAGATGAGGAGGGGGAGATGCGACCGAGAATGAGAGAGAGGGAGATGGTGG GATTAGGGTTTTTTTTTTAATTGGAGCAGTTATTTTTTAAAATATTTGGGGGTATAAATGTATTTTTGCACTTAAGGGGA TGGTGTGGATAGTAAAGAGGGATGGTCCAAATAGTCTCTGCCTTGTAAGTCATACTGTTTGTTTACCTTGCAATTTTTTA TTTCATCAATATTCAAATGAACTATGTTATTTGAGTTCAGATTGCTCCAAAAAAGCAAGGATCCTACCACTTAAATTAGT AAAAGTTTTTCAATTAGACAAACTACATTCACGGGTCTTTTGATTAGAAAGAAGAAAAAAAATGAAAAAATCCTATAGAG ATCCGGTATAGATCTTGAGCACATTTTTCAGTCTTGTCATGAAAAAAAAATGTTCATAGTGTTTTTTAATGATTTAAAAA ATATTAGAATTTGAAATAAAATCTCCTGATTATTTGACAAGCTACTTTGAGTAGTTTATAGAAAAAGCTATAATTGGAAC TATTTTAAAATAAAAAGTGCTTTTTATAGAACGAACCTAACAAAAAGAGGTTTCAGCTGATATAATATGTCCAAAAAATA TATATCATTTTTTACACAATTTTAAATTCACTTCTTTTTAGATTAGAAAAACAGATCCCAAATTATGTTATGAAATTGTT AAATTGTTTTTTTTAGAAATATCTTTAAATATATACCATAATCTTAGAGGCTGTTGAAAGTAGAAACCATACGGTTTAGG TCATGTACTACTATTCCTACAATGCTACTAGTGTTACTGTACGTTTACCAGTACAACCCCAAGCTTTCTAATACAAAATG CTCGTAACCCTATTTTCTGAGTGAGGATCGAAGACTAATGTATACTAGAGATGTATGTCTATTTTCTCTAGTAGTCATTG GTATGACTTTTTATCCTTGCTGTAGTTGTGTATCTCTTTGAATTCCAATGTTGTTAATTTTTGGCCTGTTATTGCACTAT TGTTTTCTTTCCCTTCTTAATTGTTCTGTACTTGTCTTTCTGTTCTTGATACATTTTTCTAGTATGCTATACTTTGATAA ACAATTAATTGCATAGTTTAGCATGTAGGTTATTTTTTTCCACAGAATTTTAAAATTTTCCATTTTTTATGTGACATATA CGTTACCTTAAATATGTGGCTCCTGATACATGGCCATCACTTGCTTCTTTTTGGAAAGATCTGCTCTTTGCTTCACCAAA GGTACAAGGACTTTGCACCAAGCCTGATTCAAGGACTTCTCAAAATCTTCTCTCCTGGAAAACCTGGTGATGAATCCGAT ACTGACAAAAACTTGAAGGCAATGAAGAAGCGCAGTAGTCTGAAACTTCTATTGGAACTTTTTTTTGTTGGAGTTATTGA AGATGGCGCCATTTTTATCACTATCATAAAAGACCTTACCAGTGTGGAGCAGCTAAAAGATCGGGATGCTACACAAACAA GTTTGACACTTCTTTCTAGCTTTGCTCGACAAGGGAGGATTTTTCTAGGACTTTCTGTTAATGGACCAGAAATTCATGAA GAGGTATTTCTTTTATTAATTCTTCACTAGTATAACCAGTGCTTTCTCTTATTCATTTTTGGCTAGACTTACTTTTTTGG TTTTCATTAACTTATTCAATCTCTATTGTGTAGTCATTTTAAATCATGGCTATAAGTTTTGCTCCTGCCATTTTATTATA TTATTTTGTGCCAAGGATTGTTCTGTACGCTAGCTGTGTTTTATATTCCTGCACTGACATTCTGATACAGTTTTTTAAAG GTCTTGCCATCACGGCTGATCAAAAGAAAGTTCTTAGGAAAGCATGTTATGCATTTTATGATGCTGCAGCTGAGCTACTT CAGTCTGAGCATTCTGTAAGAGTTCCAGCCTTTGTAAAATAATTTTTGTCTGTCTTCATGTCCTCTGTTCTGGTTTCTTC TTTCCATCAAATCCTTTGTGCCAATAATTTTGTTTGTCCTTCTGATTAGTGATGGCTTTATATCTTGACAGTCACTTCGA GTAATGGAGCATGAAAATTCTAAGATTTTGAATGCAAAAGGTGAGCTCAGCGAGGAAAATGTTGCTTCATATGAAAAGCT TCGCAAATCCTATGACCATTTGTACCGTAATGTCTCATCGTAAGTTTCTTTGTTTAGTTTTGACTACTAATATCTACATG TTTAATTAAGTTATTGTTGATAGACTTAATATATTCTTGCAAAACTACGGACCCCTGTTCAAGGGTTACATATATCGTTG CACATGTATATGTATATACCCAGCTGTTTGTTCCCTTTGATTCTTCTATCCTGTAATTATGATTGTGTTTTTACAGATTA GCAGAAGCACTTGATATGCAGCCTCCAGTAATGCCAGAGGATGGACACACAACAAGGGTTACTAGTGGCGAGGAGGCTAT TTCTTCTGCTTCTGGGAAAGATTCTTCTGTTGTTGAACCGATATGGGATGATGAAGATACACGGGCTTTCTATGAATGTT TACCCGATCTTAGGTTTGTACTTCTAAGAAACTTCTGTATGTATCACATTGCTACTTGGTCCTTCATAAATTAATTCTTC CACTAGCTCTTGGTCTTTGTACTCTTTCTTGTTTAAAAATTTATATTTGACATAAACATCAACGGTTTCATATTTTTCTC CAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACGGAACCAAAAAGCAATGAGCAATCTGTAAAAAGTCAAGACCAGT CAACTGTAAGGGAAAAAATTTCAACCTATTTCACAATCTTCTAGTTGTTAGTTTTTGTAGTTTTTGAATTTTTCTTTCCT AATTGGATGAAGGTTACACCTAGATGTACCCAATTCTTATACCTTTAGGTCTTCGTGTTGGGATCATTCATGATTCTCTG AAACCATTCTTGTTGTTCTTTAAATACTTGATGGTAATATTATTCGTTGTTTTCTTATCATGTAGTTATGCAGTTTAATT TCCGTTGAGCATACACCTAGCAGATTAAGTCTTTAGGAGAGTTGCCCCATGGCAAGAACATAATCCATTCTTTATATATA GCTTGGAATTAGCGATGGTTTCAACTACTTCATAGGTAGCAATGACAGTTGCTGATTCTCATAAAAAACAGCAACCTGGT GCTATGTCCTTGTGATAAAGCGTTGTTGCATTATTGATTGTTTCACTTTTTTTGTATGTAGTTTCCCAGTTTTGGAGAGT ATCTTATTGTCTGCATACTCAAACTTCTCCTTTCTGTCTAATGAAATGTTTTTTTCTATATTTGAGCAACTTTAGATACT ATTCCATAATTATTCATGAAAAACTAATATGAAAGTTTTAATCATATAAAACCACGATGTTGGTTTTTTCTTACCAACCT TCTGCAACTGTTCACTGACTGCAAGTTTGGTGAACTAGGAAATATTGCCTGAATCAGACAAAGGGCAAACCACCCGTGAA AGTGGAGAGGTCTCCACAGACCCTAGTGCTTTGCCAGAGGGAGAAAGCATACAAGGAGTGAAGGGTAAAGAAGAACAAGA GAAGTCTAAAGAATTGGACCGAGAGAAGGAAAAAGACAAAGAAAAAGACAAGGACAAAGACAAAGAAAAAGACAAGGACA AAGAAAAAGAAAAAGAGAAAGATAATGACAAAAAGGGGGAAAATGAAAAGGACAAACTCAGAAGTCTTGAAGGAACAAAC TTGGATGCTCTGTTGCAGAGGCTTCCTGGTTGTGTGAGCCGTGACCTTATAGATCAACTAACTGTGAGAATATCTTATGC AGTTGTTACTTATCTTAGATTGTATTGTTATTTTTGTCATCATTAATTGTTATTTCCTTTTTGCTTAACACATGTTAGGT GGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTCGTGAGGGCATTATTCAGTGTACCAAGGACATCTCTGG AACTACTACCATATTACTCACGCATGGTTGCCACACTATCCACTTGTATGAAAGACGTCTCTTCAATTCTCTTGCAGATG TTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGTTATTTCATATAATTTTTTATTTCTTGTCACCTTTAAATATTT AGGTGATTACTTATCTAGTTATTGAAATGTCTTAACAGGACCAGATGAACATTGAGACAAAGATCAAGAATATCAGGTTC ATTGGAGAACTTTGCAAGTTCAAGATTGCCCCTGCTGGCCTAGTCTTCAGTTGTTTGAAGGTATAAGAGACTAATAATCA AATTATAAATCAAGGTGTTCCTTTTATCTACGATGACAATTTTCTTAAACTTGCAACTTATGTTTTGGATGTTAGAAATA AGTTAGAACCACACACCACCACAAAACCTTAGGCTTAAGGCAATGGATGTGTGTGTTCTTTAACTTATATGCTAATCTAG ACAATGTGGGACTTCTTTGAGTCACACTTGTTACTACTCTAATATGGAGCCACTCTTATGCTGTCAACACTCAACAGTGT TCAGTTTCACTTGACTAAAGTCTTGTATTTTTATGCGTTAAGACGTTTAAATTATAATCTCCTTTTCCATTATTTTCTGT ATTTTTCTTTCGATACCTCGGAAAACTTATTTTCTGTTTTTTGTCACATAAGTCTTTTAGGGAATATGCAAATTATATGA AATACAATTTGGTATGCTCCATTTTTCCACCTTCAAGCCTGTAACTTTTTTTCTTGGATCTAGTAGTAGTACTCTTACCC ATCATAGTCTTTCTTCATATGACAAATAGCTCCTTTTTGTTGTATTGGACTAAAATGTGTTCTTTGTACATTTTTTACAA TCTGGATTCAGATGTTGTGCAAGCTTATCTTCTGTACAAGCTTACCTCTTCTTTTAGGAGATTGAATCCTTCATTGACGT TTTCTTGTCATTCCAGGCATGTTTAGATGACTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTCGAAACATGTG GCCGGTTTCTGTATCGGTCTCCAGAAACTTCTATACGTATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTA AAAAACTTGGATCCTCGACATAGCACTTTGGTAGAGAATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGAGT TGCTAAAGTCCGTCCTCCCTTGCATCAGGTGAAATTCTTATTTCAATTTCTCTATCTCTAATAAGTTTCACAATCTCAGC TAACATTGTAATTGATATCTTTATTGCAGTATATCAGAAAATTACTTTTCTCTGATCTTGATAAATCTACCATTGAGCAT GTGCTCCGGCAACTTCGTAAATTACCATGGAGTGAATGTGAACCATATCTTTTAAAATGCTTCATGAAGGTCTACAAAGG CAAATACGGTCAAATTCACCTGATTGCATCTCTTGCTGCCGGTTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATAG TTGATGAGGTTATTATTTTTGATATGTTATTCCTTTCTTTATTTGATATCGCTTCATCATGTAATACCATGATTTGAATT TTGAGGAATGCGCACCTATTTATTAATAAGCTCTTGTTTTGGTTGCCCAAAACTTTTTTGCATGTAAATTTCTTCACATT GAACAAGAGTGGGCTTTTAATTAGAAGTTACTCACTTGATTTAACATATTCAATTATAACTAAATCACTTTTATGTTTTA AATGATTGAATTTTTGAATTACTATTTCTAGTACTACTATCTACTAGACCTGAGGCAGAAGGAAGTCATTGCAAGTGAAT ATTTTATAGACATTTACAAATTGTTATTTTACATTATGATTATTAGGTCCTGGAGGAGATTAGAATTGGGCTTGAACTAA ATGACTATGGGATGCAGCAAAGACGTGTTGCCTATATGCGATTCTTAGGGGAGCTTTACAACTACAAGCATGCAGACTCC TCTGTCATTTTTGAGACACTATATCTCATTCTTGTCTATGGTCACGGGACACCAGAGGTATTATTTTTTTACTGTTAAGT GTTAACTTGTATTTTTTTAAACAGGGAAGACATTAAGCTTTTGTTGTGACATTATGGAATTTGTTTATTCATCCTGCCAG CAAGATGTACTCGATCCACCTGAAGATTTTTTTCGTATAAGGTTGATCATTACTCTGCTTGAAACTTGTGGGCATTACTT TGACCATGGCTCTTCTAAGAGGAAACTTGATCGATTCTTGATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCACTGC CACTGGATGTCGAATTTGACTTGCAGGTCAGTCAGGCAGCGTTTATGTTGACTGTATTTCATTATGAGGGTATGATTGAT GTGTTAATTTATTTATTTAATGATTTGGATTCCCAACCCTTCTTTATGTTTACTTCAGTGTTCAGTTTGGGCTACTAATC CAGTAGGTTTGGGATTGCTTTCCAGTGGCTTTTATGTACCTTATTATGTCTTTGGAATTTCATCTTATATAATATATCTT TTCTTAGAATTTTGATTTGCAGAGAGACTAGGTAGCTTTATTCTTTCTTAGTTGACCTTGATTATTCTGGTTGTACACTT GCACTCAGTCAAAAAGATATCTTATTGTTCATATTCTGGTTCTCCGGAAGAAACATTATTTTTTTCTTGTCTATTGTTGT TCTTTATAAGTACCTATGTTATCCGAGTGACCCTCTTGCCATGCCATACATTTAATTGGTGGGATTAAGTATCAACGTAA AATAGGATCTATCTATAGGACTTACCTGAAGAATCATCTAATTTGGCAATATCCAGTAATAGGATGTGTAGTTGTGTACA TATGAGGTGAACTTTGGAACAAAAATATAATTTGCAAGTTATAACCATCTTAAGAATGCAGTAGTTTTTGTTGATAAAAC GGTAGCTGCTTTCATTTACCCCACACTCCCTTTCTCTCTCTCCTCATTCGATTGCCCATGGACTTTTAGTATCTCTTATA CAATGCACTTGTTAGCAGACTTCAAAACTGTCATACTAGCCATTATATAATATGCATTTGTTCTTACATTTCATATTTTG GGTTCATTATTTCTTTTGTGTAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTTCGTTACTCTTCTATTGAGGAAGTG AATGCAGCTCTAGTAGAACTTGAGGAGCATGATCGCATTGTTTCTGCTGATAAGGCCAGTGGTGAAAAACAGTCTGAGAA GCCTCCAAGAAGGACCACTTCCTCCATGGTCGTTGGCAATGGACAAAGCATTGATAATGGTGCAGAGGACAACGGAGTGC AAGATGATGTTAATGACGGTGAGGCTGATTCAGGTAGCGATGTAATTGATGAGGAAGGACATGATGATGATGGGTTGGAT GAGGAGAATCATGATGATGGGTCTGGGACTGAGGATGAGGATGATGATGAAGGGCCTGGACCTGCTTCTGATGAGGAAGA TGAAGTCCATGTAAGACAGAAGGTGACAGAGGTGGACCCTCTGGAAGAAGCCAGTTTTGATCAAGAGCTCAAGGCTGTAT TACAGGCAAGGGTTTACATAATTTATTATGCTTGTCCCTTCACTTGTGCTAAGTTTCTACCTTTGTACATGCATACATAC ATCTGTGCATGCATGTGTCTGTCTCCTTGTGAATTTTGATTCATTTTCAGAACATCGTAAAACGTTTCCTGGGAACCCTA CTTCTAACCTGATATGTTGTTATTATGATAAGATAAGATTTGATTTGAGATTTATTTTGTTATGATAAGAAACGTTATGG AAGGCATCTTATCATGACATCATGTACTAGATAGGGTTGATTTTGTAAATGTTTGAGAATGGCTATGCAACCTATTATTG AGACAGACTAGGACCCTTGTCTATATATTATACTTTAAGTCATGTGTAAATTGTAATACAATATCAATCAGAAAATCATA TTCTTATTACCTATAGTCCTTTCAACTGATATGATAAAATTTTATTTTTTCCTCTGATCTCGTGCTTTCTTACTGAGCTA GTCTTGTATTAGTTGTACTGAACTTGTACTTGACCCAGATTATTTGTGAAAGTAAAATAGGAGAGGTGTTTTTCTCACAA TATTAGAAACTTTTGGAGCCTTATTTGAGAAATATACTGTCTTGTTTCTTCTCTCTTTTCCACCCAATCTATAAGTCCAA TGATGTGTTATAAGATAAGATTTTCTTCGGGTGTACCCAATGTCTGGTTGTATTTATAACATTTTCATAGTGCTTGCTCC ACAATTTGTGCAGGAGAGTATGGAACAGCGAAGGCTGGAGCTACGAGGCCGTCCTACATTGAATATGATGATTCCAATGA ATGTATTTGAGGGATCTGCCAAGGATCATCACGGGAGAGGAACTGGTGGGGAAAGTGGTGATGAGGCCCTGGATGAGGAT ACTGATGGAAACAAAGAAGTCCAAGTGAAAGTTCTTGTGAAACGTGGGAACAAGCAACAGACAAAGCAGATGTACATCCC ACGCAATTCGTCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCCGAACTTCAAGAGAAAGAAGATATTAAGAGGCTTG TCTTGGAGTATAATGATAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCAACAAACTGGATGCAGAGTGGGGGT TATAGGGGTGGTGGTCGTGGCTACACTTCAGAAGGAACCGGTGGCAGAAGTGGTGGATCACGCCATCGGCATCATTATCC CGGAAGTGGCTTCTACTATAGCAGAAGAAGGTAA
CDS sequence (LotjaGi6g1v0212500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGATTCAGTTTTGTCGCTTCTACTAGGAATGACTCAGGATTTTTAAGGACATTGGATTCTAGTATTAAGCGCAACAC GGCTGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCTGCGTGAAGCACTGATGGACGAGTTACGAACTGTCAACATGA GCAAATTTGTCAGTGAAGCAGTGGCGGCTATATGTGATGCCAAACTTAGGAGTTCTGATATACAAGCAGCAGTCCAGATC TGCTCTTTGCTTCACCAAAGGTACAAGGACTTTGCACCAAGCCTGATTCAAGGACTTCTCAAAATCTTCTCTCCTGGAAA ACCTGGTGATGAATCCGATACTGACAAAAACTTGAAGGCAATGAAGAAGCGCAGTAGTCTGAAACTTCTATTGGAACTTT TTTTTGTTGGAGTTATTGAAGATGGCGCCATTTTTATCACTATCATAAAAGACCTTACCAGTGTGGAGCAGCTAAAAGAT CGGGATGCTACACAAACAAGTTTGACACTTCTTTCTAGCTTTGCTCGACAAGGGAGGATTTTTCTAGGACTTTCTGTTAA TGGACCAGAAATTCATGAAGAGTTTTTTAAAGGTCTTGCCATCACGGCTGATCAAAAGAAAGTTCTTAGGAAAGCATGTT ATGCATTTTATGATGCTGCAGCTGAGCTACTTCAGTCTGAGCATTCTTCACTTCGAGTAATGGAGCATGAAAATTCTAAG ATTTTGAATGCAAAAGGTGAGCTCAGCGAGGAAAATGTTGCTTCATATGAAAAGCTTCGCAAATCCTATGACCATTTGTA CCGTAATGTCTCATCATTAGCAGAAGCACTTGATATGCAGCCTCCAGTAATGCCAGAGGATGGACACACAACAAGGGTTA CTAGTGGCGAGGAGGCTATTTCTTCTGCTTCTGGGAAAGATTCTTCTGTTGTTGAACCGATATGGGATGATGAAGATACA CGGGCTTTCTATGAATGTTTACCCGATCTTAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACGGAACCAAAAAGCAA TGAGCAATCTGTAAAAAGTCAAGACCAGTCAACTGAAATATTGCCTGAATCAGACAAAGGGCAAACCACCCGTGAAAGTG GAGAGGTCTCCACAGACCCTAGTGCTTTGCCAGAGGGAGAAAGCATACAAGGAGTGAAGGGTAAAGAAGAACAAGAGAAG TCTAAAGAATTGGACAAAGAAAAAGAAAAAGAGAAAGATAATGACAAAAAGGGGGAAAATGAAAAGGACAAACTCAGAAG TCTTGAAGGAACAAACTTGGATGCTCTGTTGCAGAGGCTTCCTGGTTGTGTGAGCCGTGACCTTATAGATCAACTAACTG TGGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTCGTGAGGGCATTATTCAGTGTACCAAGGACATCTCTG GAACTACTACCATATTACTCACGCATGGTTGCCACACTATCCACTTGTATGAAAGACGTCTCTTCAATTCTCTTGCAGAT GTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGACCAGATGAACATTGAGACAAAGATCAAGAATATCAGGTTCA TTGGAGAACTTTGCAAGTTCAAGATTGCCCCTGCTGGCCTAGTCTTCAGTTGTTTGAAGGCATGTTTAGATGACTTTACT CATCACAACATTGATGTAGCTTGCAATCTTCTCGAAACATGTGGCCGGTTTCTGTATCGGTCTCCAGAAACTTCTATACG TATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTAAAAAACTTGGATCCTCGACATAGCACTTTGGTAGAGA ATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGAGTTGCTAAAGTCCGTCCTCCCTTGCATCAGGTCTACAAA GGCAAATACGGTCAAATTCACCTGATTGCATCTCTTGCTGCCGGTTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTAT AGTTGATGAGGTCCTGGAGGAGATTAGAATTGGGCTTGAACTAAATGACTATGGGATGCAGCAAAGACGTGTTGCCTATA TGCGATTCTTAGGGGAGCTTTACAACTACAAGCATGCAGACTCCTCTGTCATTTTTGAGACACTATATCTCATTCTTGTC TATGGTCACGGGACACCAGAGCAAGATGTACTCGATCCACCTGAAGATTTTTTTCGTATAAGGTTGATCATTACTCTGCT TGAAACTTGTGGGCATTACTTTGACCATGGCTCTTCTAAGAGGAAACTTGATCGATTCTTGATACACTTCCAGAGGTATA TTTTAAGCAAAGGTGCACTGCCACTGGATGTCGAATTTGACTTGCAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTT CGTTACTCTTCTATTGAGGAAGTGAATGCAGCTCTAGTAGAACTTGAGGAGCATGATCGCATTGTTTCTGCTGATAAGGC CAGTGGTGAAAAACAGTCTGAGAAGCCTCCAAGAAGGACCACTTCCTCCATGGTCGTTGGCAATGGACAAAGCATTGATA ATGGTGCAGAGGACAACGGAGTGCAAGATGATGTTAATGACGGTGAGGCTGATTCAGGTAGCGATGTAATTGATGAGGAA GGACATGATGATGATGGGTTGGATGAGGAGAATCATGATGATGGGTCTGGGACTGAGGATGAGGATGATGATGAAGGGCC TGGACCTGCTTCTGATGAGGAAGATGAAGTCCATGTAAGACAGAAGGTGACAGAGGTGGACCCTCTGGAAGAAGCCAGTT TTGATCAAGAGCTCAAGGCTTGCTTGCTCCACAATTTGTGCAGGAGAGTATGGAACAGCGAAGGCTGGAGCTACGAGGCC GTCCTACATTGA
Protein sequence (LotjaGi6g1v0212500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRFSFVASTRNDSGFLRTLDSSIKRNTAVIKKLKQINEELREALMDELRTVNMSKFVSEAVAAICDAKLRSSDIQAAVQI CSLLHQRYKDFAPSLIQGLLKIFSPGKPGDESDTDKNLKAMKKRSSLKLLLELFFVGVIEDGAIFITIIKDLTSVEQLKD RDATQTSLTLLSSFARQGRIFLGLSVNGPEIHEEFFKGLAITADQKKVLRKACYAFYDAAAELLQSEHSSLRVMEHENSK ILNAKGELSEENVASYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEAISSASGKDSSVVEPIWDDEDT RAFYECLPDLRAFVPAVLLGETEPKSNEQSVKSQDQSTEILPESDKGQTTRESGEVSTDPSALPEGESIQGVKGKEEQEK SKELDKEKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFSVPRTSL ELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIKNIRFIGELCKFKIAPAGLVFSCLKACLDDFT HHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQVYK GKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRIGLELNDYGMQQRRVAYMRFLGELYNYKHADSSVIFETLYLILV YGHGTPEQDVLDPPEDFFRIRLIITLLETCGHYFDHGSSKRKLDRFLIHFQRYILSKGALPLDVEFDLQDLFVDLRPNMV RYSSIEEVNAALVELEEHDRIVSADKASGEKQSEKPPRRTTSSMVVGNGQSIDNGAEDNGVQDDVNDGEADSGSDVIDEE GHDDDGLDEENHDDGSGTEDEDDDEGPGPASDEEDEVHVRQKVTEVDPLEEASFDQELKACLLHNLCRRVWNSEGWSYEA VLH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 128 | 128 | - | – | |
| PANTHER | 2 | 637 | 636 | 0.0 | ||
| PANTHER | 2 | 637 | 636 | 0.0 | – | |
| Gene3D | 4 | 285 | 282 | 9.6E-75 | ||
| Coils | 23 | 50 | 28 | - | – | |
| SMART | 23 | 245 | 223 | 0.12 | ||
| SUPERFAMILY | 42 | 156 | 115 | 5.18E-10 | ||
| Phobius | 129 | 149 | 21 | - | – | |
| Phobius | 150 | 963 | 814 | - | – | |
| MobiDBLite | 277 | 307 | 31 | - | – | |
| MobiDBLite | 343 | 364 | 22 | - | – | |
| MobiDBLite | 343 | 425 | 83 | - | – | |
| MobiDBLite | 390 | 425 | 36 | - | – | |
| Coils | 394 | 414 | 21 | - | – | |
| Gene3D | 399 | 624 | 226 | 2.5E-38 | ||
| SUPERFAMILY | 431 | 625 | 195 | 1.9E-55 | ||
| SMART | 434 | 622 | 189 | 2.0E-48 | ||
| Pfam | 437 | 621 | 185 | 4.1E-32 | ||
| Coils | 505 | 525 | 21 | - | – | |
| Gene3D | 625 | 822 | 198 | 1.2E-72 | ||
| SMART | 625 | 798 | 174 | 3.8E-18 | ||
| SUPERFAMILY | 635 | 817 | 183 | 1.42E-52 | ||
| Pfam | 637 | 792 | 156 | 6.3E-32 | ||
| PANTHER | 638 | 949 | 312 | 0.0 | ||
| PANTHER | 638 | 949 | 312 | 0.0 | – | |
| MobiDBLite | 823 | 921 | 99 | - | – | |
| MobiDBLite | 823 | 837 | 15 | - | – | |
| MobiDBLite | 838 | 857 | 20 | - | – | |
| MobiDBLite | 860 | 911 | 52 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0212500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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