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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212500 |
| Transcript ID | LotjaGi6g1v0212500.7 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51022792..51033407) extracted from Lotus japonicus Gifu genome v1.2.
AAAATTATGCAGTGTTCCAATGGTAACTATAATTTTGATGATCAGGTTTTTTCTATGTATGCTTATTTGTGAATGAATGG GTTGTATAGTTTGTATTGGCTTTTAGCTTTACATGGTGAATTAAATGTTGTGTATGAAATCCTTGGGCAGGAAGCCGTTG CTCACCTTGAGGAAATAAAGAAGTCAATTGAGGCGAAGATCGCTTTACGACAAAGCAATTTGAATCCCGACAGGCCCGGT TAGTTATTGTTCCATTTTGTCGTCATTAATTATTAATATGCGATTCAGTTTTGTCGCTTCTACTAGGAATGGTGAAAACT CTTTAAATTGCTGTAGAATGCAGGGTTACTTGAGCTCTAGCTCAAGTGATTCCAAGCTCTTTAATTGAACACTGGCGATT TTTCTCCATGTTTTCAATCCCAACTAATGAGGAAGTCTTGATTGTTATTGTTTTAACACATGCACTTAGGCTCCTTTGAG CACTGTTTTGTCGTTTCTCTGGTATGTGTACTGTCATTATTTATTGCATGAATAGTAATACAATTTGCTTACATTGCATG CAGACTCAGGATTTTTAAGGACATTGGATTCTAGTATTAAGCGCAACACGGCTGTTATTAAGAAACTGAAGCAGATTAAT GAAGAGCTGCGTGAAGCACTGATGGACGAGTTACGAACTGTCAACATGAGCAAATTTGTCAGTGAAGCAGTGGCGGCTAT ATGTGATGCCAAACTTAGGAGTTCTGATATACAAGCAGCAGTCCAGGTGTGTGCTGTGCATTTTTTCCCCTGGTTTCTAC ACAAAAAGAAATTAATTCCATAGAAGAAAGAATATCTTTGATTAGTTGCAATAAATGTGCTAAGGGTCCATGAGTTTGTA AGTCGGCAGAGACTATTTGGACCATCCCTCTTTACTATCCACACCATCCCCTTTTTTTTATAATTCCAAAAATACCCCCC ACATAGAAAACAAACAAAGCAGTAAAAAAAATACTCTCACAATCTCACCTTCTTCTTCCTTCTTCCTCTTCCACTCTCAC CTTCCCCCATCCCTATTTCATCTTCTAAATCAATATATATCACACATCTTGAAGCTCCAAATCAGTGTAGAAGATAAGTG GGTGAGATCAAGAGAAGATTAGAAGCTCAAAATAGGTGAGATTTTGGGATTTTTACGGGTTTTTCGCGTAAATCTGGGTT GAATATGTGGGTTCTGATTCGTTCCGCCACTTAAAATGCGGACGTTTAATTGCTACCGCTATTTTAGTAGCGGTAACTTC CGCTATCTTAATAGCGGTAACTACCGCTATCTTAGTAGCGGTAACTACCGCAATTAAAATAGCTGTAACGTCCGCTATCA AGGTAGCTGTAACTTCCGCTATTTTTGTCTAATGCTCACGTTTGTTGTGTCCGCTATCTTGATAGCGGAAGTTACCGCTA TCTTGATAGCGGAAGTTACAGCTATCAAGATAGCGGAAGTTACCGCTATCATGACTGCGGTAGTTACCGCTATCTTGATT GCGGAAGGTTTTGAAACCGTGTGTGGGTTTTTAAGTAAACCAGAGGGAACAACTCAGAGGGACTTACCAGAGTCAAGGTT CCTTCTGAAATCGAGTGTGAGTTTTCCTTCCTCCTCTTTCTTTCTTTCTTCTCCTTCTGAAATCGTGATGGTGATGGACG ACGGAGAATGGAGGCTAGGGTTTTGGTGGGGAAGGGTGAAGGACGTGATGGAGGCTGGGATTTTGGTGGGGAAACCGTGA GAGAAGGAGATGAGGAGGAGGAGATGAGGGCCACCGTCAGAATGAGAGAAGGAGATGAGGAGGGGGAGATGCGACCGAGA ATGAGAGAGAGGGAGATGGTGGGATTAGGGTTTTTTTTTTAATTGGAGCAGTTATTTTTTAAAATATTTGGGGGTATAAA TGTATTTTTGCACTTAAGGGGATGGTGTGGATAGTAAAGAGGGATGGTCCAAATAGTCTCTGCCTTGTAAGTCATACTGT TTGTTTACCTTGCAATTTTTTATTTCATCAATATTCAAATGAACTATGTTATTTGAGTTCAGATTGCTCCAAAAAAGCAA GGATCCTACCACTTAAATTAGTAAAAGTTTTTCAATTAGACAAACTACATTCACGGGTCTTTTGATTAGAAAGAAGAAAA AAAATGAAAAAATCCTATAGAGATCCGGTATAGATCTTGAGCACATTTTTCAGTCTTGTCATGAAAAAAAAATGTTCATA GTGTTTTTTAATGATTTAAAAAATATTAGAATTTGAAATAAAATCTCCTGATTATTTGACAAGCTACTTTGAGTAGTTTA TAGAAAAAGCTATAATTGGAACTATTTTAAAATAAAAAGTGCTTTTTATAGAACGAACCTAACAAAAAGAGGTTTCAGCT GATATAATATGTCCAAAAAATATATATCATTTTTTACACAATTTTAAATTCACTTCTTTTTAGATTAGAAAAACAGATCC CAAATTATGTTATGAAATTGTTAAATTGTTTTTTTTAGAAATATCTTTAAATATATACCATAATCTTAGAGGCTGTTGAA AGTAGAAACCATACGGTTTAGGTCATGTACTACTATTCCTACAATGCTACTAGTGTTACTGTACGTTTACCAGTACAACC CCAAGCTTTCTAATACAAAATGCTCGTAACCCTATTTTCTGAGTGAGGATCGAAGACTAATGTATACTAGAGATGTATGT CTATTTTCTCTAGTAGTCATTGGTATGACTTTTTATCCTTGCTGTAGTTGTGTATCTCTTTGAATTCCAATGTTGTTAAT TTTTGGCCTGTTATTGCACTATTGTTTTCTTTCCCTTCTTAATTGTTCTGTACTTGTCTTTCTGTTCTTGATACATTTTT CTAGTATGCTATACTTTGATAAACAATTAATTGCATAGTTTAGCATGTAGGTTATTTTTTTCCACAGAATTTTAAAATTT TCCATTTTTTATGTGACATATACGTTACCTTAAATATGTGGCTCCTGATACATGGCCATCACTTGCTTCTTTTTGGAAAG ATCTGCTCTTTGCTTCACCAAAGGTACAAGGACTTTGCACCAAGCCTGATTCAAGGACTTCTCAAAATCTTCTCTCCTGG AAAACCTGGTGATGAATCCGATACTGACAAAAACTTGAAGGCAATGAAGAAGCGCAGTAGTCTGAAACTTCTATTGGAAC TTTTTTTTGTTGGAGTTATTGAAGATGGCGCCATTTTTATCACTATCATAAAAGACCTTACCAGTGTGGAGCAGCTAAAA GATCGGGATGCTACACAAACAAGTTTGACACTTCTTTCTAGCTTTGCTCGACAAGGGAGGATTTTTCTAGGACTTTCTGT TAATGGACCAGAAATTCATGAAGAGGTATTTCTTTTATTAATTCTTCACTAGTATAACCAGTGCTTTCTCTTATTCATTT TTGGCTAGACTTACTTTTTTGGTTTTCATTAACTTATTCAATCTCTATTGTGTAGTCATTTTAAATCATGGCTATAAGTT TTGCTCCTGCCATTTTATTATATTATTTTGTGCCAAGGATTGTTCTGTACGCTAGCTGTGTTTTATATTCCTGCACTGAC ATTCTGATACAGTTTTTTAAAGGTCTTGCCATCACGGCTGATCAAAAGAAAGTTCTTAGGAAAGCATGTTATGCATTTTA TGATGCTGCAGCTGAGCTACTTCAGTCTGAGCATTCTGTAAGAGTTCCAGCCTTTGTAAAATAATTTTTGTCTGTCTTCA TGTCCTCTGTTCTGGTTTCTTCTTTCCATCAAATCCTTTGTGCCAATAATTTTGTTTGTCCTTCTGATTAGTGATGGCTT TATATCTTGACAGTCACTTCGAGTAATGGAGCATGAAAATTCTAAGATTTTGAATGCAAAAGGTGAGCTCAGCGAGGAAA ATGTTGCTTCATATGAAAAGCTTCGCAAATCCTATGACCATTTGTACCGTAATGTCTCATCGTAAGTTTCTTTGTTTAGT TTTGACTACTAATATCTACATGTTTAATTAAGTTATTGTTGATAGACTTAATATATTCTTGCAAAACTACGGACCCCTGT TCAAGGGTTACATATATCGTTGCACATGTATATGTATATACCCAGCTGTTTGTTCCCTTTGATTCTTCTATCCTGTAATT ATGATTGTGTTTTTACAGATTAGCAGAAGCACTTGATATGCAGCCTCCAGTAATGCCAGAGGATGGACACACAACAAGGG TTACTAGTGGCGAGGAGGCTATTTCTTCTGCTTCTGGGAAAGATTCTTCTGTTGTTGAACCGATATGGGATGATGAAGAT ACACGGGCTTTCTATGAATGTTTACCCGATCTTAGGTTTGTACTTCTAAGAAACTTCTGTATGTATCACATTGCTACTTG GTCCTTCATAAATTAATTCTTCCACTAGCTCTTGGTCTTTGTACTCTTTCTTGTTTAAAAATTTATATTTGACATAAACA TCAACGGTTTCATATTTTTCTCCAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACGGAACCAAAAAGCAATGAGCAA TCTGTAAAAAGTCAAGACCAGTCAACTGTAAGGGAAAAAATTTCAACCTATTTCACAATCTTCTAGTTGTTAGTTTTTGT AGTTTTTGAATTTTTCTTTCCTAATTGGATGAAGGTTACACCTAGATGTACCCAATTCTTATACCTTTAGGTCTTCGTGT TGGGATCATTCATGATTCTCTGAAACCATTCTTGTTGTTCTTTAAATACTTGATGGTAATATTATTCGTTGTTTTCTTAT CATGTAGTTATGCAGTTTAATTTCCGTTGAGCATACACCTAGCAGATTAAGTCTTTAGGAGAGTTGCCCCATGGCAAGAA CATAATCCATTCTTTATATATAGCTTGGAATTAGCGATGGTTTCAACTACTTCATAGGTAGCAATGACAGTTGCTGATTC TCATAAAAAACAGCAACCTGGTGCTATGTCCTTGTGATAAAGCGTTGTTGCATTATTGATTGTTTCACTTTTTTTGTATG TAGTTTCCCAGTTTTGGAGAGTATCTTATTGTCTGCATACTCAAACTTCTCCTTTCTGTCTAATGAAATGTTTTTTTCTA TATTTGAGCAACTTTAGATACTATTCCATAATTATTCATGAAAAACTAATATGAAAGTTTTAATCATATAAAACCACGAT GTTGGTTTTTTCTTACCAACCTTCTGCAACTGTTCACTGACTGCAAGTTTGGTGAACTAGGAAATATTGCCTGAATCAGA CAAAGGGCAAACCACCCGTGAAAGTGGAGAGGTCTCCACAGACCCTAGTGCTTTGCCAGAGGGAGAAAGCATACAAGGAG TGAAGGGTAAAGAAGAACAAGAGAAGTCTAAAGAATTGGACCGAGAGAAGGAAAAAGACAAAGAAAAAGACAAGGACAAA GACAAAGAAAAAGACAAGGACAAAGAAAAAGAAAAAGAGAAAGATAATGACAAAAAGGGGGAAAATGAAAAGGACAAACT CAGAAGTCTTGAAGGAACAAACTTGGATGCTCTGTTGCAGAGGCTTCCTGGTTGTGTGAGCCGTGACCTTATAGATCAAC TAACTGTGAGAATATCTTATGCAGTTGTTACTTATCTTAGATTGTATTGTTATTTTTGTCATCATTAATTGTTATTTCCT TTTTGCTTAACACATGTTAGGTGGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTCGTGAGGGCATTATTC AGTGTACCAAGGACATCTCTGGAACTACTACCATATTACTCACGCATGGTTGCCACACTATCCACTTGTATGAAAGACGT CTCTTCAATTCTCTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGTTATTTCATATAATTTTTTAT TTCTTGTCACCTTTAAATATTTAGGTGATTACTTATCTAGTTATTGAAATGTCTTAACAGGACCAGATGAACATTGAGAC AAAGATCAAGAATATCAGGTTCATTGGAGAACTTTGCAAGTTCAAGATTGCCCCTGCTGGCCTAGTCTTCAGTTGTTTGA AGGTATAAGAGACTAATAATCAAATTATAAATCAAGGTGTTCCTTTTATCTACGATGACAATTTTCTTAAACTTGCAACT TATGTTTTGGATGTTAGAAATAAGTTAGAACCACACACCACCACAAAACCTTAGGCTTAAGGCAATGGATGTGTGTGTTC TTTAACTTATATGCTAATCTAGACAATGTGGGACTTCTTTGAGTCACACTTGTTACTACTCTAATATGGAGCCACTCTTA TGCTGTCAACACTCAACAGTGTTCAGTTTCACTTGACTAAAGTCTTGTATTTTTATGCGTTAAGACGTTTAAATTATAAT CTCCTTTTCCATTATTTTCTGTATTTTTCTTTCGATACCTCGGAAAACTTATTTTCTGTTTTTTGTCACATAAGTCTTTT AGGGAATATGCAAATTATATGAAATACAATTTGGTATGCTCCATTTTTCCACCTTCAAGCCTGTAACTTTTTTTCTTGGA TCTAGTAGTAGTACTCTTACCCATCATAGTCTTTCTTCATATGACAAATAGCTCCTTTTTGTTGTATTGGACTAAAATGT GTTCTTTGTACATTTTTTACAATCTGGATTCAGATGTTGTGCAAGCTTATCTTCTGTACAAGCTTACCTCTTCTTTTAGG AGATTGAATCCTTCATTGACGTTTTCTTGTCATTCCAGGCATGTTTAGATGACTTTACTCATCACAACATTGATGTAGCT TGCAATCTTCTCGAAACATGTGGCCGGTTTCTGTATCGGTCTCCAGAAACTTCTATACGTATGGCTAACATGTTGGAGAT ACTGATGCGCTTGAAAAATGTAAAAAACTTGGATCCTCGACATAGCACTTTGGTAGAGAATGCATACTACCTTTGCAAGC CACCGGAAAGATCTGCACGAGTTGCTAAAGTCCGTCCTCCCTTGCATCAGGTGAAATTCTTATTTCAATTTCTCTATCTC TAATAAGTTTCACAATCTCAGCTAACATTGTAATTGATATCTTTATTGCAGTATATCAGAAAATTACTTTTCTCTGATCT TGATAAATCTACCATTGAGCATGTGCTCCGGCAACTTCGTAAATTACCATGGAGTGAATGTGAACCATATCTTTTAAAAT GCTTCATGAAGGTCTACAAAGGCAAATACGGTCAAATTCACCTGATTGCATCTCTTGCTGCCGGTTTAAGTCGCTATCAT GATGAGTTTGCTGTAGCTATAGTTGATGAGGTTATTATTTTTGATATGTTATTCCTTTCTTTATTTGATATCGCTTCATC ATGTAATACCATGATTTGAATTTTGAGGAATGCGCACCTATTTATTAATAAGCTCTTGTTTTGGTTGCCCAAAACTTTTT TGCATGTAAATTTCTTCACATTGAACAAGAGTGGGCTTTTAATTAGAAGTTACTCACTTGATTTAACATATTCAATTATA ACTAAATCACTTTTATGTTTTAAATGATTGAATTTTTGAATTACTATTTCTAGTACTACTATCTACTAGACCTGAGGCAG AAGGAAGTCATTGCAAGTGAATATTTTATAGACATTTACAAATTGTTATTTTACATTATGATTATTAGGTCCTGGAGGAG ATTAGAATTGGGCTTGAACTAAATGACTATGGGATGCAGCAAAGACGTGTTGCCTATATGCGATTCTTAGGGGAGCTTTA CAACTACAAGCATGCAGACTCCTCTGTCATTTTTGAGACACTATATCTCATTCTTGTCTATGGTCACGGGACACCAGAGG TATTATTTTTTTACTGTTAAGTGTTAACTTGTATTTTTTTAAACAGGGAAGACATTAAGCTTTTGTTGTGACATTATGGA ATTTGTTTATTCATCCTGCCAGCAAGATGTACTCGATCCACCTGAAGATTTTTTTCGTATAAGGTTGATCATTACTCTGC TTGAAACTTGTGGGCATTACTTTGACCATGGCTCTTCTAAGAGGAAACTTGATCGATTCTTGATACACTTCCAGAGGTAT ATTTTAAGCAAAGGTGCACTGCCACTGGATGTCGAATTTGACTTGCAGGTCAGTCAGGCAGCGTTTATGTTGACTGTATT TCATTATGAGGGTATGATTGATGTGTTAATTTATTTATTTAATGATTTGGATTCCCAACCCTTCTTTATGTTTACTTCAG TGTTCAGTTTGGGCTACTAATCCAGTAGGTTTGGGATTGCTTTCCAGTGGCTTTTATGTACCTTATTATGTCTTTGGAAT TTCATCTTATATAATATATCTTTTCTTAGAATTTTGATTTGCAGAGAGACTAGGTAGCTTTATTCTTTCTTAGTTGACCT TGATTATTCTGGTTGTACACTTGCACTCAGTCAAAAAGATATCTTATTGTTCATATTCTGGTTCTCCGGAAGAAACATTA TTTTTTTCTTGTCTATTGTTGTTCTTTATAAGTACCTATGTTATCCGAGTGACCCTCTTGCCATGCCATACATTTAATTG GTGGGATTAAGTATCAACGTAAAATAGGATCTATCTATAGGACTTACCTGAAGAATCATCTAATTTGGCAATATCCAGTA ATAGGATGTGTAGTTGTGTACATATGAGGTGAACTTTGGAACAAAAATATAATTTGCAAGTTATAACCATCTTAAGAATG CAGTAGTTTTTGTTGATAAAACGGTAGCTGCTTTCATTTACCCCACACTCCCTTTCTCTCTCTCCTCATTCGATTGCCCA TGGACTTTTAGTATCTCTTATACAATGCACTTGTTAGCAGACTTCAAAACTGTCATACTAGCCATTATATAATATGCATT TGTTCTTACATTTCATATTTTGGGTTCATTATTTCTTTTGTGTAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTTCG TTACTCTTCTATTGAGGAAGTGAATGCAGCTCTAGTAGAACTTGAGGAGCATGATCGCATTGTTTCTGCTGATAAGGCCA GTGGTGAAAAACAGTCTGAGAAGCCTCCAAGAAGGACCACTTCCTCCATGGTCGTTGGCAATGGACAAAGCATTGATAAT GGTGCAGAGGACAACGGAGTGCAAGATGATGTTAATGACGGTGAGGCTGATTCAGGTAGCGATGTAATTGATGAGGAAGG ACATGATGATGATGGGTTGGATGAGGAGAATCATGATGATGGGTCTGGGACTGAGGATGAGGATGATGATGAAGGGCCTG GACCTGCTTCTGATGAGGAAGATGAAGTCCATGTAAGACAGAAGGTGACAGAGGTGGACCCTCTGGAAGAAGCCAGTTTT GATCAAGAGCTCAAGGCTGTATTACAGGCAAGGGTTTACATAATTTATTATGCTTGTCCCTTCACTTGTGCTAAGTTTCT ACCTTTGTACATGCATACATACATCTGTGCATGCATGTGTCTGTCTCCTTGTGAATTTTGATTCATTTTCAGAACATCGT AAAACGTTTCCTGGGAACCCTACTTCTAACCTGATATGTTGTTATTATGATAAGATAAGATTTGATTTGAGATTTATTTT GTTATGATAAGAAACGTTATGGAAGGCATCTTATCATGACATCATGTACTAGATAGGGTTGATTTTGTAAATGTTTGAGA ATGGCTATGCAACCTATTATTGAGACAGACTAGGACCCTTGTCTATATATTATACTTTAAGTCATGTGTAAATTGTAATA CAATATCAATCAGAAAATCATATTCTTATTACCTATAGTCCTTTCAACTGATATGATAAAATTTTATTTTTTCCTCTGAT CTCGTGCTTTCTTACTGAGCTAGTCTTGTATTAGTTGTACTGAACTTGTACTTGACCCAGATTATTTGTGAAAGTAAAAT AGGAGAGGTGTTTTTCTCACAATATTAGAAACTTTTGGAGCCTTATTTGAGAAATATACTGTCTTGTTTCTTCTCTCTTT TCCACCCAATCTATAAGTCCAATGATGTGTTATAAGATAAGATTTTCTTCGGGTGTACCCAATGTCTGGTTGTATTTATA ACATTTTCATAGTGCTTGCTCCACAATTTGTGCAGGAGAGTATGGAACAGCGAAGGCTGGAGCTACGAGGCCGTCCTACA TTGAATATGATGATTCCAATGAATGTATTTGAGGGATCTGCCAAGGATCATCACGGGAGAGGAACTGGTGGGGAAAGTGG TGATGAGGCCCTGGATGAGGATACTGATGGAAACAAAGAAGTCCAAGTGAAAGTTCTTGTGAAACGTGGGAACAAGCAAC AGACAAAGCAGATGTACATCCCACGCAATTCGTCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCCGAACTTCAAGAG AAAGAAGATATTAAGAGGCTTGTCTTGGAGTATAATGATAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCAAC AAACTGGATGCAGAGTGGGGGTTATAGGGGTGGTGGTCGTGGCTACACTTCAGAAGGAACCGGTGGCAGAAGTGGTGGAT CACGCCATCGGCATCATTATCCCGGAAGTGGCTTCTACTATAGCAGAAGAAGGTAA
CDS sequence (LotjaGi6g1v0212500.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGTGTTCCAATGGTAACTATAATTTTGATGATCAGGAAGCCGTTGCTCACCTTGAGGAAATAAAGAAGTCAATTGA GGCGAAGATCGCTTTACGACAAAGCAATTTGAATCCCGACAGGCCCGACTCAGGATTTTTAAGGACATTGGATTCTAGTA TTAAGCGCAACACGGCTGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCTGCGTGAAGCACTGATGGACGAGTTACGA ACTGTCAACATGAGCAAATTTGTCAGTGAAGCAGTGGCGGCTATATGTGATGCCAAACTTAGGAGTTCTGATATACAAGC AGCAGTCCAGATCTGCTCTTTGCTTCACCAAAGGTACAAGGACTTTGCACCAAGCCTGATTCAAGGACTTCTCAAAATCT TCTCTCCTGGAAAACCTGGTGATGAATCCGATACTGACAAAAACTTGAAGGCAATGAAGAAGCGCAGTAGTCTGAAACTT CTATTGGAACTTTTTTTTGTTGGAGTTATTGAAGATGGCGCCATTTTTATCACTATCATAAAAGACCTTACCAGTGTGGA GCAGCTAAAAGATCGGGATGCTACACAAACAAGTTTGACACTTCTTTCTAGCTTTGCTCGACAAGGGAGGATTTTTCTAG GACTTTCTGTTAATGGACCAGAAATTCATGAAGAGTTTTTTAAAGGTCTTGCCATCACGGCTGATCAAAAGAAAGTTCTT AGGAAAGCATGTTATGCATTTTATGATGCTGCAGCTGAGCTACTTCAGTCTGAGCATTCTTCACTTCGAGTAATGGAGCA TGAAAATTCTAAGATTTTGAATGCAAAAGGTGAGCTCAGCGAGGAAAATGTTGCTTCATATGAAAAGCTTCGCAAATCCT ATGACCATTTGTACCGTAATGTCTCATCATTAGCAGAAGCACTTGATATGCAGCCTCCAGTAATGCCAGAGGATGGACAC ACAACAAGGGTTACTAGTGGCGAGGAGGCTATTTCTTCTGCTTCTGGGAAAGATTCTTCTGTTGTTGAACCGATATGGGA TGATGAAGATACACGGGCTTTCTATGAATGTTTACCCGATCTTAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACGG AACCAAAAAGCAATGAGCAATCTGTAAAAAGTCAAGACCAGTCAACTGAAATATTGCCTGAATCAGACAAAGGGCAAACC ACCCGTGAAAGTGGAGAGGTCTCCACAGACCCTAGTGCTTTGCCAGAGGGAGAAAGCATACAAGGAGTGAAGGGTAAAGA AGAACAAGAGAAGTCTAAAGAATTGGACCGAGAGAAGGAAAAAGAGAAAGATAATGACAAAAAGGGGGAAAATGAAAAGG ACAAACTCAGAAGTCTTGAAGGAACAAACTTGGATGCTCTGTTGCAGAGGCTTCCTGGTTGTGTGAGCCGTGACCTTATA GATCAACTAACTGTGGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTCGTGAGGGCATTATTCAGTGTACC AAGGACATCTCTGGAACTACTACCATATTACTCACGCATGGTTGCCACACTATCCACTTGTATGAAAGACGTCTCTTCAA TTCTCTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGACCAGATGAACATTGAGACAAAGATCAAG AATATCAGGTTCATTGGAGAACTTTGCAAGTTCAAGATTGCCCCTGCTGGCCTAGTCTTCAGTTGTTTGAAGGCATGTTT AGATGACTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTCGAAACATGTGGCCGGTTTCTGTATCGGTCTCCAG AAACTTCTATACGTATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTAAAAAACTTGGATCCTCGACATAGC ACTTTGGTAGAGAATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGAGTTGCTAAAGTCCGTCCTCCCTTGCA TCAGTATATCAGAAAATTACTTTTCTCTGATCTTGATAAATCTACCATTGAGCATGTGCTCCGGCAACTTCGTAAATTAC CATGGAGTGAATGTGAACCATATCTTTTAAAATGCTTCATGAAGGTCTACAAAGGCAAATACGGTCAAATTCACCTGATT GCATCTCTTGCTGCCGGTTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATAGTTGATGAGGTCCTGGAGGAGATTAG AATTGGGCTTGAACTAAATGACTATGGGATGCAGCAAAGACGTGTTGCCTATATGCGATTCTTAGGGGAGCTTTACAACT ACAAGCATGCAGACTCCTCTGTCATTTTTGAGACACTATATCTCATTCTTGTCTATGGTCACGGGACACCAGAGCAAGAT GTACTCGATCCACCTGAAGATTTTTTTCGTATAAGGTTGATCATTACTCTGCTTGAAACTTGTGGGCATTACTTTGACCA TGGCTCTTCTAAGAGGAAACTTGATCGATTCTTGATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCACTGCCACTGG ATGTCGAATTTGACTTGCAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTTCGTTACTCTTCTATTGAGGAAGTGAAT GCAGCTCTAGTAGAACTTGAGGAGCATGATCGCATTGTTTCTGCTGATAAGGCCAGTGGTGAAAAACAGTCTGAGAAGCC TCCAAGAAGGACCACTTCCTCCATGGTCGTTGGCAATGGACAAAGCATTGATAATGGTGCAGAGGACAACGGAGTGCAAG ATGATGTTAATGACGGTGAGGCTGATTCAGGTAGCGATGTAATTGATGAGGAAGGACATGATGATGATGGGTTGGATGAG GAGAATCATGATGATGGGTCTGGGACTGAGGATGAGGATGATGATGAAGGGCCTGGACCTGCTTCTGATGAGGAAGATGA AGTCCATGTAAGACAGAAGGTGACAGAGGTGGACCCTCTGGAAGAAGCCAGTTTTGATCAAGAGCTCAAGGCTGTATTAC AGGAGAGTATGGAACAGCGAAGGCTGGAGCTACGAGGCCGTCCTACATTGAATATGATGATTCCAATGAATGTATTTGAG GGATCTGCCAAGGATCATCACGGGAGAGGAACTGGTGGGGAAAGTGGTGATGAGGCCCTGGATGAGGATACTGATGGAAA CAAAGAAGTCCAAGTGAAAGTTCTTGTGAAACGTGGGAACAAGCAACAGACAAAGCAGATGTACATCCCACGCAATTCGT CACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCCGAACTTCAAGAGAAAGAAGATATTAAGAGGCTTGTCTTGGAGTAT AATGATAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCAACAAACTGGATGCAGAGTGGGGGTTATAGGGGTGG TGGTCGTGGCTACACTTCAGAAGGAACCGGTGGCAGAAGTGGTGGATCACGCCATCGGCATCATTATCCCGGAAGTGGCT TCTACTATAGCAGAAGAAGGTAA
Protein sequence (LotjaGi6g1v0212500.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQCSNGNYNFDDQEAVAHLEEIKKSIEAKIALRQSNLNPDRPDSGFLRTLDSSIKRNTAVIKKLKQINEELREALMDELR TVNMSKFVSEAVAAICDAKLRSSDIQAAVQICSLLHQRYKDFAPSLIQGLLKIFSPGKPGDESDTDKNLKAMKKRSSLKL LLELFFVGVIEDGAIFITIIKDLTSVEQLKDRDATQTSLTLLSSFARQGRIFLGLSVNGPEIHEEFFKGLAITADQKKVL RKACYAFYDAAAELLQSEHSSLRVMEHENSKILNAKGELSEENVASYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGH TTRVTSGEEAISSASGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKSNEQSVKSQDQSTEILPESDKGQT TRESGEVSTDPSALPEGESIQGVKGKEEQEKSKELDREKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLI DQLTVEFCYLNSKSNRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIK NIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPRHS TLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLLKCFMKVYKGKYGQIHLI ASLAAGLSRYHDEFAVAIVDEVLEEIRIGLELNDYGMQQRRVAYMRFLGELYNYKHADSSVIFETLYLILVYGHGTPEQD VLDPPEDFFRIRLIITLLETCGHYFDHGSSKRKLDRFLIHFQRYILSKGALPLDVEFDLQDLFVDLRPNMVRYSSIEEVN AALVELEEHDRIVSADKASGEKQSEKPPRRTTSSMVVGNGQSIDNGAEDNGVQDDVNDGEADSGSDVIDEEGHDDDGLDE ENHDDGSGTEDEDDDEGPGPASDEEDEVHVRQKVTEVDPLEEASFDQELKAVLQESMEQRRLELRGRPTLNMMIPMNVFE GSAKDHHGRGTGGESGDEALDEDTDGNKEVQVKVLVKRGNKQQTKQMYIPRNSSLVQSTKQKEAAELQEKEDIKRLVLEY NDREEEELNGLGTQPTNWMQSGGYRGGGRGYTSEGTGGRSGGSRHRHHYPGSGFYYSRRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 159 | 159 | - | – | |
| Gene3D | 7 | 316 | 310 | 1.9E-78 | ||
| PANTHER | 11 | 1176 | 1166 | 0.0 | ||
| PANTHER | 11 | 1176 | 1166 | 0.0 | – | |
| SMART | 54 | 276 | 223 | 0.12 | ||
| Coils | 54 | 81 | 28 | - | – | |
| SUPERFAMILY | 73 | 187 | 115 | 8.63E-10 | ||
| Phobius | 160 | 180 | 21 | - | – | |
| Phobius | 181 | 1180 | 1000 | - | – | |
| MobiDBLite | 308 | 338 | 31 | - | – | |
| MobiDBLite | 374 | 456 | 83 | - | – | |
| MobiDBLite | 374 | 395 | 22 | - | – | |
| MobiDBLite | 421 | 456 | 36 | - | – | |
| Coils | 425 | 445 | 21 | - | – | |
| Gene3D | 429 | 662 | 234 | 2.5E-38 | ||
| SUPERFAMILY | 462 | 656 | 195 | 1.52E-55 | ||
| SMART | 465 | 653 | 189 | 2.0E-48 | ||
| Pfam | 468 | 652 | 185 | 5.7E-32 | ||
| Coils | 536 | 556 | 21 | - | – | |
| SUPERFAMILY | 663 | 888 | 226 | 1.44E-64 | ||
| Gene3D | 663 | 893 | 231 | 1.8E-92 | ||
| SMART | 668 | 869 | 202 | 1.6E-41 | ||
| Pfam | 670 | 863 | 194 | 3.0E-39 | ||
| MobiDBLite | 894 | 908 | 15 | - | – | |
| MobiDBLite | 894 | 1005 | 112 | - | – | |
| MobiDBLite | 909 | 928 | 20 | - | – | |
| MobiDBLite | 931 | 982 | 52 | - | – | |
| Pfam | 983 | 1119 | 137 | 6.1E-36 | ||
| MobiDBLite | 983 | 1005 | 23 | - | – | |
| MobiDBLite | 1042 | 1064 | 23 | - | – | |
| MobiDBLite | 1042 | 1056 | 15 | - | – | |
| MobiDBLite | 1126 | 1180 | 55 | - | – | |
| MobiDBLite | 1162 | 1180 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0212500.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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