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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212500 |
| Transcript ID | LotjaGi6g1v0212500.8 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Regulator of nonsense transcripts 2; TAIR: AT2G39260.1 regulator of nonsense transcripts UPF2; Swiss-Prot: sp|F4IUX6|RENT2_ARATH Regulator of nonsense transcripts UPF2; TrEMBL-Plants: tr|I1MHT6|I1MHT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0212500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51022792..51033431) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTGCGTCAGCATTTAGTGAGAAAATTATGCAGTGTTCCAATGGTAACTATAATTTTGATGATCAGGTTTTTTCTAT GTATGCTTATTTGTGAATGAATGGGTTGTATAGTTTGTATTGGCTTTTAGCTTTACATGGTGAATTAAATGTTGTGTATG AAATCCTTGGGCAGGAAGCCGTTGCTCACCTTGAGGAAATAAAGAAGTCAATTGAGGCGAAGATCGCTTTACGACAAAGC AATTTGAATCCCGACAGGCCCGGTTAGTTATTGTTCCATTTTGTCGTCATTAATTATTAATATGCGATTCAGTTTTGTCG CTTCTACTAGGAATGGTGAAAACTCTTTAAATTGCTGTAGAATGCAGGGTTACTTGAGCTCTAGCTCAAGTGATTCCAAG CTCTTTAATTGAACACTGGCGATTTTTCTCCATGTTTTCAATCCCAACTAATGAGGAAGTCTTGATTGTTATTGTTTTAA CACATGCACTTAGGCTCCTTTGAGCACTGTTTTGTCGTTTCTCTGGTATGTGTACTGTCATTATTTATTGCATGAATAGT AATACAATTTGCTTACATTGCATGCAGACTCAGGATTTTTAAGGACATTGGATTCTAGTATTAAGCGCAACACGGCTGTT ATTAAGAAACTGAAGCAGATTAATGAAGAGCTGCGTGAAGCACTGATGGACGAGTTACGAACTGTCAACATGAGCAAATT TGTCAGTGAAGCAGTGGCGGCTATATGTGATGCCAAACTTAGGAGTTCTGATATACAAGCAGCAGTCCAGGTGTGTGCTG TGCATTTTTTCCCCTGGTTTCTACACAAAAAGAAATTAATTCCATAGAAGAAAGAATATCTTTGATTAGTTGCAATAAAT GTGCTAAGGGTCCATGAGTTTGTAAGTCGGCAGAGACTATTTGGACCATCCCTCTTTACTATCCACACCATCCCCTTTTT TTTATAATTCCAAAAATACCCCCCACATAGAAAACAAACAAAGCAGTAAAAAAAATACTCTCACAATCTCACCTTCTTCT TCCTTCTTCCTCTTCCACTCTCACCTTCCCCCATCCCTATTTCATCTTCTAAATCAATATATATCACACATCTTGAAGCT CCAAATCAGTGTAGAAGATAAGTGGGTGAGATCAAGAGAAGATTAGAAGCTCAAAATAGGTGAGATTTTGGGATTTTTAC GGGTTTTTCGCGTAAATCTGGGTTGAATATGTGGGTTCTGATTCGTTCCGCCACTTAAAATGCGGACGTTTAATTGCTAC CGCTATTTTAGTAGCGGTAACTTCCGCTATCTTAATAGCGGTAACTACCGCTATCTTAGTAGCGGTAACTACCGCAATTA AAATAGCTGTAACGTCCGCTATCAAGGTAGCTGTAACTTCCGCTATTTTTGTCTAATGCTCACGTTTGTTGTGTCCGCTA TCTTGATAGCGGAAGTTACCGCTATCTTGATAGCGGAAGTTACAGCTATCAAGATAGCGGAAGTTACCGCTATCATGACT GCGGTAGTTACCGCTATCTTGATTGCGGAAGGTTTTGAAACCGTGTGTGGGTTTTTAAGTAAACCAGAGGGAACAACTCA GAGGGACTTACCAGAGTCAAGGTTCCTTCTGAAATCGAGTGTGAGTTTTCCTTCCTCCTCTTTCTTTCTTTCTTCTCCTT CTGAAATCGTGATGGTGATGGACGACGGAGAATGGAGGCTAGGGTTTTGGTGGGGAAGGGTGAAGGACGTGATGGAGGCT GGGATTTTGGTGGGGAAACCGTGAGAGAAGGAGATGAGGAGGAGGAGATGAGGGCCACCGTCAGAATGAGAGAAGGAGAT GAGGAGGGGGAGATGCGACCGAGAATGAGAGAGAGGGAGATGGTGGGATTAGGGTTTTTTTTTTAATTGGAGCAGTTATT TTTTAAAATATTTGGGGGTATAAATGTATTTTTGCACTTAAGGGGATGGTGTGGATAGTAAAGAGGGATGGTCCAAATAG TCTCTGCCTTGTAAGTCATACTGTTTGTTTACCTTGCAATTTTTTATTTCATCAATATTCAAATGAACTATGTTATTTGA GTTCAGATTGCTCCAAAAAAGCAAGGATCCTACCACTTAAATTAGTAAAAGTTTTTCAATTAGACAAACTACATTCACGG GTCTTTTGATTAGAAAGAAGAAAAAAAATGAAAAAATCCTATAGAGATCCGGTATAGATCTTGAGCACATTTTTCAGTCT TGTCATGAAAAAAAAATGTTCATAGTGTTTTTTAATGATTTAAAAAATATTAGAATTTGAAATAAAATCTCCTGATTATT TGACAAGCTACTTTGAGTAGTTTATAGAAAAAGCTATAATTGGAACTATTTTAAAATAAAAAGTGCTTTTTATAGAACGA ACCTAACAAAAAGAGGTTTCAGCTGATATAATATGTCCAAAAAATATATATCATTTTTTACACAATTTTAAATTCACTTC TTTTTAGATTAGAAAAACAGATCCCAAATTATGTTATGAAATTGTTAAATTGTTTTTTTTAGAAATATCTTTAAATATAT ACCATAATCTTAGAGGCTGTTGAAAGTAGAAACCATACGGTTTAGGTCATGTACTACTATTCCTACAATGCTACTAGTGT TACTGTACGTTTACCAGTACAACCCCAAGCTTTCTAATACAAAATGCTCGTAACCCTATTTTCTGAGTGAGGATCGAAGA CTAATGTATACTAGAGATGTATGTCTATTTTCTCTAGTAGTCATTGGTATGACTTTTTATCCTTGCTGTAGTTGTGTATC TCTTTGAATTCCAATGTTGTTAATTTTTGGCCTGTTATTGCACTATTGTTTTCTTTCCCTTCTTAATTGTTCTGTACTTG TCTTTCTGTTCTTGATACATTTTTCTAGTATGCTATACTTTGATAAACAATTAATTGCATAGTTTAGCATGTAGGTTATT TTTTTCCACAGAATTTTAAAATTTTCCATTTTTTATGTGACATATACGTTACCTTAAATATGTGGCTCCTGATACATGGC CATCACTTGCTTCTTTTTGGAAAGATCTGCTCTTTGCTTCACCAAAGGTACAAGGACTTTGCACCAAGCCTGATTCAAGG ACTTCTCAAAATCTTCTCTCCTGGAAAACCTGGTGATGAATCCGATACTGACAAAAACTTGAAGGCAATGAAGAAGCGCA GTAGTCTGAAACTTCTATTGGAACTTTTTTTTGTTGGAGTTATTGAAGATGGCGCCATTTTTATCACTATCATAAAAGAC CTTACCAGTGTGGAGCAGCTAAAAGATCGGGATGCTACACAAACAAGTTTGACACTTCTTTCTAGCTTTGCTCGACAAGG GAGGATTTTTCTAGGACTTTCTGTTAATGGACCAGAAATTCATGAAGAGGTATTTCTTTTATTAATTCTTCACTAGTATA ACCAGTGCTTTCTCTTATTCATTTTTGGCTAGACTTACTTTTTTGGTTTTCATTAACTTATTCAATCTCTATTGTGTAGT CATTTTAAATCATGGCTATAAGTTTTGCTCCTGCCATTTTATTATATTATTTTGTGCCAAGGATTGTTCTGTACGCTAGC TGTGTTTTATATTCCTGCACTGACATTCTGATACAGTTTTTTAAAGGTCTTGCCATCACGGCTGATCAAAAGAAAGTTCT TAGGAAAGCATGTTATGCATTTTATGATGCTGCAGCTGAGCTACTTCAGTCTGAGCATTCTGTAAGAGTTCCAGCCTTTG TAAAATAATTTTTGTCTGTCTTCATGTCCTCTGTTCTGGTTTCTTCTTTCCATCAAATCCTTTGTGCCAATAATTTTGTT TGTCCTTCTGATTAGTGATGGCTTTATATCTTGACAGTCACTTCGAGTAATGGAGCATGAAAATTCTAAGATTTTGAATG CAAAAGGTGAGCTCAGCGAGGAAAATGTTGCTTCATATGAAAAGCTTCGCAAATCCTATGACCATTTGTACCGTAATGTC TCATCGTAAGTTTCTTTGTTTAGTTTTGACTACTAATATCTACATGTTTAATTAAGTTATTGTTGATAGACTTAATATAT TCTTGCAAAACTACGGACCCCTGTTCAAGGGTTACATATATCGTTGCACATGTATATGTATATACCCAGCTGTTTGTTCC CTTTGATTCTTCTATCCTGTAATTATGATTGTGTTTTTACAGATTAGCAGAAGCACTTGATATGCAGCCTCCAGTAATGC CAGAGGATGGACACACAACAAGGGTTACTAGTGGCGAGGAGGCTATTTCTTCTGCTTCTGGGAAAGATTCTTCTGTTGTT GAACCGATATGGGATGATGAAGATACACGGGCTTTCTATGAATGTTTACCCGATCTTAGGTTTGTACTTCTAAGAAACTT CTGTATGTATCACATTGCTACTTGGTCCTTCATAAATTAATTCTTCCACTAGCTCTTGGTCTTTGTACTCTTTCTTGTTT AAAAATTTATATTTGACATAAACATCAACGGTTTCATATTTTTCTCCAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAA ACGGAACCAAAAAGCAATGAGCAATCTGTAAAAAGTCAAGACCAGTCAACTGTAAGGGAAAAAATTTCAACCTATTTCAC AATCTTCTAGTTGTTAGTTTTTGTAGTTTTTGAATTTTTCTTTCCTAATTGGATGAAGGTTACACCTAGATGTACCCAAT TCTTATACCTTTAGGTCTTCGTGTTGGGATCATTCATGATTCTCTGAAACCATTCTTGTTGTTCTTTAAATACTTGATGG TAATATTATTCGTTGTTTTCTTATCATGTAGTTATGCAGTTTAATTTCCGTTGAGCATACACCTAGCAGATTAAGTCTTT AGGAGAGTTGCCCCATGGCAAGAACATAATCCATTCTTTATATATAGCTTGGAATTAGCGATGGTTTCAACTACTTCATA GGTAGCAATGACAGTTGCTGATTCTCATAAAAAACAGCAACCTGGTGCTATGTCCTTGTGATAAAGCGTTGTTGCATTAT TGATTGTTTCACTTTTTTTGTATGTAGTTTCCCAGTTTTGGAGAGTATCTTATTGTCTGCATACTCAAACTTCTCCTTTC TGTCTAATGAAATGTTTTTTTCTATATTTGAGCAACTTTAGATACTATTCCATAATTATTCATGAAAAACTAATATGAAA GTTTTAATCATATAAAACCACGATGTTGGTTTTTTCTTACCAACCTTCTGCAACTGTTCACTGACTGCAAGTTTGGTGAA CTAGGAAATATTGCCTGAATCAGACAAAGGGCAAACCACCCGTGAAAGTGGAGAGGTCTCCACAGACCCTAGTGCTTTGC CAGAGGGAGAAAGCATACAAGGAGTGAAGGGTAAAGAAGAACAAGAGAAGTCTAAAGAATTGGACCGAGAGAAGGAAAAA GACAAAGAAAAAGACAAGGACAAAGACAAAGAAAAAGACAAGGACAAAGAAAAAGAAAAAGAGAAAGATAATGACAAAAA GGGGGAAAATGAAAAGGACAAACTCAGAAGTCTTGAAGGAACAAACTTGGATGCTCTGTTGCAGAGGCTTCCTGGTTGTG TGAGCCGTGACCTTATAGATCAACTAACTGTGAGAATATCTTATGCAGTTGTTACTTATCTTAGATTGTATTGTTATTTT TGTCATCATTAATTGTTATTTCCTTTTTGCTTAACACATGTTAGGTGGAGTTCTGTTATCTAAATTCAAAATCAAATCGG AAAAAGCTCGTGAGGGCATTATTCAGTGTACCAAGGACATCTCTGGAACTACTACCATATTACTCACGCATGGTTGCCAC ACTATCCACTTGTATGAAAGACGTCTCTTCAATTCTCTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAAA AGGTTATTTCATATAATTTTTTATTTCTTGTCACCTTTAAATATTTAGGTGATTACTTATCTAGTTATTGAAATGTCTTA ACAGGACCAGATGAACATTGAGACAAAGATCAAGAATATCAGGTTCATTGGAGAACTTTGCAAGTTCAAGATTGCCCCTG CTGGCCTAGTCTTCAGTTGTTTGAAGGTATAAGAGACTAATAATCAAATTATAAATCAAGGTGTTCCTTTTATCTACGAT GACAATTTTCTTAAACTTGCAACTTATGTTTTGGATGTTAGAAATAAGTTAGAACCACACACCACCACAAAACCTTAGGC TTAAGGCAATGGATGTGTGTGTTCTTTAACTTATATGCTAATCTAGACAATGTGGGACTTCTTTGAGTCACACTTGTTAC TACTCTAATATGGAGCCACTCTTATGCTGTCAACACTCAACAGTGTTCAGTTTCACTTGACTAAAGTCTTGTATTTTTAT GCGTTAAGACGTTTAAATTATAATCTCCTTTTCCATTATTTTCTGTATTTTTCTTTCGATACCTCGGAAAACTTATTTTC TGTTTTTTGTCACATAAGTCTTTTAGGGAATATGCAAATTATATGAAATACAATTTGGTATGCTCCATTTTTCCACCTTC AAGCCTGTAACTTTTTTTCTTGGATCTAGTAGTAGTACTCTTACCCATCATAGTCTTTCTTCATATGACAAATAGCTCCT TTTTGTTGTATTGGACTAAAATGTGTTCTTTGTACATTTTTTACAATCTGGATTCAGATGTTGTGCAAGCTTATCTTCTG TACAAGCTTACCTCTTCTTTTAGGAGATTGAATCCTTCATTGACGTTTTCTTGTCATTCCAGGCATGTTTAGATGACTTT ACTCATCACAACATTGATGTAGCTTGCAATCTTCTCGAAACATGTGGCCGGTTTCTGTATCGGTCTCCAGAAACTTCTAT ACGTATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTAAAAAACTTGGATCCTCGACATAGCACTTTGGTAG AGAATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGAGTTGCTAAAGTCCGTCCTCCCTTGCATCAGGTGAAA TTCTTATTTCAATTTCTCTATCTCTAATAAGTTTCACAATCTCAGCTAACATTGTAATTGATATCTTTATTGCAGTATAT CAGAAAATTACTTTTCTCTGATCTTGATAAATCTACCATTGAGCATGTGCTCCGGCAACTTCGTAAATTACCATGGAGTG AATGTGAACCATATCTTTTAAAATGCTTCATGAAGGTCTACAAAGGCAAATACGGTCAAATTCACCTGATTGCATCTCTT GCTGCCGGTTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATAGTTGATGAGGTTATTATTTTTGATATGTTATTCCT TTCTTTATTTGATATCGCTTCATCATGTAATACCATGATTTGAATTTTGAGGAATGCGCACCTATTTATTAATAAGCTCT TGTTTTGGTTGCCCAAAACTTTTTTGCATGTAAATTTCTTCACATTGAACAAGAGTGGGCTTTTAATTAGAAGTTACTCA CTTGATTTAACATATTCAATTATAACTAAATCACTTTTATGTTTTAAATGATTGAATTTTTGAATTACTATTTCTAGTAC TACTATCTACTAGACCTGAGGCAGAAGGAAGTCATTGCAAGTGAATATTTTATAGACATTTACAAATTGTTATTTTACAT TATGATTATTAGGTCCTGGAGGAGATTAGAATTGGGCTTGAACTAAATGACTATGGGATGCAGCAAAGACGTGTTGCCTA TATGCGATTCTTAGGGGAGCTTTACAACTACAAGCATGCAGACTCCTCTGTCATTTTTGAGACACTATATCTCATTCTTG TCTATGGTCACGGGACACCAGAGGTATTATTTTTTTACTGTTAAGTGTTAACTTGTATTTTTTTAAACAGGGAAGACATT AAGCTTTTGTTGTGACATTATGGAATTTGTTTATTCATCCTGCCAGCAAGATGTACTCGATCCACCTGAAGATTTTTTTC GTATAAGGTTGATCATTACTCTGCTTGAAACTTGTGGGCATTACTTTGACCATGGCTCTTCTAAGAGGAAACTTGATCGA TTCTTGATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCACTGCCACTGGATGTCGAATTTGACTTGCAGGTCAGTCA GGCAGCGTTTATGTTGACTGTATTTCATTATGAGGGTATGATTGATGTGTTAATTTATTTATTTAATGATTTGGATTCCC AACCCTTCTTTATGTTTACTTCAGTGTTCAGTTTGGGCTACTAATCCAGTAGGTTTGGGATTGCTTTCCAGTGGCTTTTA TGTACCTTATTATGTCTTTGGAATTTCATCTTATATAATATATCTTTTCTTAGAATTTTGATTTGCAGAGAGACTAGGTA GCTTTATTCTTTCTTAGTTGACCTTGATTATTCTGGTTGTACACTTGCACTCAGTCAAAAAGATATCTTATTGTTCATAT TCTGGTTCTCCGGAAGAAACATTATTTTTTTCTTGTCTATTGTTGTTCTTTATAAGTACCTATGTTATCCGAGTGACCCT CTTGCCATGCCATACATTTAATTGGTGGGATTAAGTATCAACGTAAAATAGGATCTATCTATAGGACTTACCTGAAGAAT CATCTAATTTGGCAATATCCAGTAATAGGATGTGTAGTTGTGTACATATGAGGTGAACTTTGGAACAAAAATATAATTTG CAAGTTATAACCATCTTAAGAATGCAGTAGTTTTTGTTGATAAAACGGTAGCTGCTTTCATTTACCCCACACTCCCTTTC TCTCTCTCCTCATTCGATTGCCCATGGACTTTTAGTATCTCTTATACAATGCACTTGTTAGCAGACTTCAAAACTGTCAT ACTAGCCATTATATAATATGCATTTGTTCTTACATTTCATATTTTGGGTTCATTATTTCTTTTGTGTAGGATCTGTTTGT GGACTTGCGTCCCAATATGGTTCGTTACTCTTCTATTGAGGAAGTGAATGCAGCTCTAGTAGAACTTGAGGAGCATGATC GCATTGTTTCTGCTGATAAGGCCAGTGGTGAAAAACAGTCTGAGAAGCCTCCAAGAAGGACCACTTCCTCCATGGTCGTT GGCAATGGACAAAGCATTGATAATGGTGCAGAGGACAACGGAGTGCAAGATGATGTTAATGACGGTGAGGCTGATTCAGG TAGCGATGTAATTGATGAGGAAGGACATGATGATGATGGGTTGGATGAGGAGAATCATGATGATGGGTCTGGGACTGAGG ATGAGGATGATGATGAAGGGCCTGGACCTGCTTCTGATGAGGAAGATGAAGTCCATGTAAGACAGAAGGTGACAGAGGTG GACCCTCTGGAAGAAGCCAGTTTTGATCAAGAGCTCAAGGCTGTATTACAGGCAAGGGTTTACATAATTTATTATGCTTG TCCCTTCACTTGTGCTAAGTTTCTACCTTTGTACATGCATACATACATCTGTGCATGCATGTGTCTGTCTCCTTGTGAAT TTTGATTCATTTTCAGAACATCGTAAAACGTTTCCTGGGAACCCTACTTCTAACCTGATATGTTGTTATTATGATAAGAT AAGATTTGATTTGAGATTTATTTTGTTATGATAAGAAACGTTATGGAAGGCATCTTATCATGACATCATGTACTAGATAG GGTTGATTTTGTAAATGTTTGAGAATGGCTATGCAACCTATTATTGAGACAGACTAGGACCCTTGTCTATATATTATACT TTAAGTCATGTGTAAATTGTAATACAATATCAATCAGAAAATCATATTCTTATTACCTATAGTCCTTTCAACTGATATGA TAAAATTTTATTTTTTCCTCTGATCTCGTGCTTTCTTACTGAGCTAGTCTTGTATTAGTTGTACTGAACTTGTACTTGAC CCAGATTATTTGTGAAAGTAAAATAGGAGAGGTGTTTTTCTCACAATATTAGAAACTTTTGGAGCCTTATTTGAGAAATA TACTGTCTTGTTTCTTCTCTCTTTTCCACCCAATCTATAAGTCCAATGATGTGTTATAAGATAAGATTTTCTTCGGGTGT ACCCAATGTCTGGTTGTATTTATAACATTTTCATAGTGCTTGCTCCACAATTTGTGCAGGAGAGTATGGAACAGCGAAGG CTGGAGCTACGAGGCCGTCCTACATTGAATATGATGATTCCAATGAATGTATTTGAGGGATCTGCCAAGGATCATCACGG GAGAGGAACTGGTGGGGAAAGTGGTGATGAGGCCCTGGATGAGGATACTGATGGAAACAAAGAAGTCCAAGTGAAAGTTC TTGTGAAACGTGGGAACAAGCAACAGACAAAGCAGATGTACATCCCACGCAATTCGTCACTGGTGCAGAGTACAAAACAG AAAGAAGCAGCCGAACTTCAAGAGAAAGAAGATATTAAGAGGCTTGTCTTGGAGTATAATGATAGAGAAGAGGAGGAGCT TAATGGATTAGGGACCCAGCCAACAAACTGGATGCAGAGTGGGGGTTATAGGGGTGGTGGTCGTGGCTACACTTCAGAAG GAACCGGTGGCAGAAGTGGTGGATCACGCCATCGGCATCATTATCCCGGAAGTGGCTTCTACTATAGCAGAAGAAGGTAA
CDS sequence (LotjaGi6g1v0212500.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGTGTTCCAATGGTAACTATAATTTTGATGATCAGGAAGCCGTTGCTCACCTTGAGGAAATAAAGAAGTCAATTGA GGCGAAGATCGCTTTACGACAAAGCAATTTGAATCCCGACAGGCCCGACTCAGGATTTTTAAGGACATTGGATTCTAGTA TTAAGCGCAACACGGCTGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCTGCGTGAAGCACTGATGGACGAGTTACGA ACTGTCAACATGAGCAAATTTGTCAGTGAAGCAGTGGCGGCTATATGTGATGCCAAACTTAGGAGTTCTGATATACAAGC AGCAGTCCAGATCTGCTCTTTGCTTCACCAAAGGTACAAGGACTTTGCACCAAGCCTGATTCAAGGACTTCTCAAAATCT TCTCTCCTGGAAAACCTGGTGATGAATCCGATACTGACAAAAACTTGAAGGCAATGAAGAAGCGCAGTAGTCTGAAACTT CTATTGGAACTTTTTTTTGTTGGAGTTATTGAAGATGGCGCCATTTTTATCACTATCATAAAAGACCTTACCAGTGTGGA GCAGCTAAAAGATCGGGATGCTACACAAACAAGTTTGACACTTCTTTCTAGCTTTGCTCGACAAGGGAGGATTTTTCTAG GACTTTCTGTTAATGGACCAGAAATTCATGAAGAGTTTTTTAAAGGTCTTGCCATCACGGCTGATCAAAAGAAAGTTCTT AGGAAAGCATGTTATGCATTTTATGATGCTGCAGCTGAGCTACTTCAGTCTGAGCATTCTTCACTTCGAGTAATGGAGCA TGAAAATTCTAAGATTTTGAATGCAAAAGGTGAGCTCAGCGAGGAAAATGTTGCTTCATATGAAAAGCTTCGCAAATCCT ATGACCATTTGTACCGTAATGTCTCATCATTAGCAGAAGCACTTGATATGCAGCCTCCAGTAATGCCAGAGGATGGACAC ACAACAAGGGTTACTAGTGGCGAGGAGGCTATTTCTTCTGCTTCTGGGAAAGATTCTTCTGTTGTTGAACCGATATGGGA TGATGAAGATACACGGGCTTTCTATGAATGTTTACCCGATCTTAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACGG AACCAAAAAGCAATGAGCAATCTGTAAAAAGTCAAGACCAGTCAACTGAAATATTGCCTGAATCAGACAAAGGGCAAACC ACCCGTGAAAGTGGAGAGGTCTCCACAGACCCTAGTGCTTTGCCAGAGGGAGAAAGCATACAAGGAGTGAAGGGTAAAGA AGAACAAGAGAAGTCTAAAGAATTGGACCGAGACAAAGAAAAAGAAAAAGAGAAAGATAATGACAAAAAGGGGGAAAATG AAAAGGACAAACTCAGAAGTCTTGAAGGAACAAACTTGGATGCTCTGTTGCAGAGGCTTCCTGGTTGTGTGAGCCGTGAC CTTATAGATCAACTAACTGTGGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTCGTGAGGGCATTATTCAG TGTACCAAGGACATCTCTGGAACTACTACCATATTACTCACGCATGGTTGCCACACTATCCACTTGTATGAAAGACGTCT CTTCAATTCTCTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGACCAGATGAACATTGAGACAAAG ATCAAGAATATCAGGTTCATTGGAGAACTTTGCAAGTTCAAGATTGCCCCTGCTGGCCTAGTCTTCAGTTGTTTGAAGGC ATGTTTAGATGACTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTCGAAACATGTGGCCGGTTTCTGTATCGGT CTCCAGAAACTTCTATACGTATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTAAAAAACTTGGATCCTCGA CATAGCACTTTGGTAGAGAATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGAGTTGCTAAAGTCCGTCCTCC CTTGCATCAGTATATCAGAAAATTACTTTTCTCTGATCTTGATAAATCTACCATTGAGCATGTGCTCCGGCAACTTCGTA AATTACCATGGAGTGAATGTGAACCATATCTTTTAAAATGCTTCATGAAGGTCTACAAAGGCAAATACGGTCAAATTCAC CTGATTGCATCTCTTGCTGCCGGTTTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATAGTTGATGAGGTCCTGGAGGA GATTAGAATTGGGCTTGAACTAAATGACTATGGGATGCAGCAAAGACGTGTTGCCTATATGCGATTCTTAGGGGAGCTTT ACAACTACAAGCATGCAGACTCCTCTGTCATTTTTGAGACACTATATCTCATTCTTGTCTATGGTCACGGGACACCAGAG CAAGATGTACTCGATCCACCTGAAGATTTTTTTCGTATAAGGTTGATCATTACTCTGCTTGAAACTTGTGGGCATTACTT TGACCATGGCTCTTCTAAGAGGAAACTTGATCGATTCTTGATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCACTGC CACTGGATGTCGAATTTGACTTGCAGGATCTGTTTGTGGACTTGCGTCCCAATATGGTTCGTTACTCTTCTATTGAGGAA GTGAATGCAGCTCTAGTAGAACTTGAGGAGCATGATCGCATTGTTTCTGCTGATAAGGCCAGTGGTGAAAAACAGTCTGA GAAGCCTCCAAGAAGGACCACTTCCTCCATGGTCGTTGGCAATGGACAAAGCATTGATAATGGTGCAGAGGACAACGGAG TGCAAGATGATGTTAATGACGGTGAGGCTGATTCAGGTAGCGATGTAATTGATGAGGAAGGACATGATGATGATGGGTTG GATGAGGAGAATCATGATGATGGGTCTGGGACTGAGGATGAGGATGATGATGAAGGGCCTGGACCTGCTTCTGATGAGGA AGATGAAGTCCATGTAAGACAGAAGGTGACAGAGGTGGACCCTCTGGAAGAAGCCAGTTTTGATCAAGAGCTCAAGGCTG TATTACAGGAGAGTATGGAACAGCGAAGGCTGGAGCTACGAGGCCGTCCTACATTGAATATGATGATTCCAATGAATGTA TTTGAGGGATCTGCCAAGGATCATCACGGGAGAGGAACTGGTGGGGAAAGTGGTGATGAGGCCCTGGATGAGGATACTGA TGGAAACAAAGAAGTCCAAGTGAAAGTTCTTGTGAAACGTGGGAACAAGCAACAGACAAAGCAGATGTACATCCCACGCA ATTCGTCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCCGAACTTCAAGAGAAAGAAGATATTAAGAGGCTTGTCTTG GAGTATAATGATAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCAACAAACTGGATGCAGAGTGGGGGTTATAG GGGTGGTGGTCGTGGCTACACTTCAGAAGGAACCGGTGGCAGAAGTGGTGGATCACGCCATCGGCATCATTATCCCGGAA GTGGCTTCTACTATAGCAGAAGAAGGTAA
Protein sequence (LotjaGi6g1v0212500.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQCSNGNYNFDDQEAVAHLEEIKKSIEAKIALRQSNLNPDRPDSGFLRTLDSSIKRNTAVIKKLKQINEELREALMDELR TVNMSKFVSEAVAAICDAKLRSSDIQAAVQICSLLHQRYKDFAPSLIQGLLKIFSPGKPGDESDTDKNLKAMKKRSSLKL LLELFFVGVIEDGAIFITIIKDLTSVEQLKDRDATQTSLTLLSSFARQGRIFLGLSVNGPEIHEEFFKGLAITADQKKVL RKACYAFYDAAAELLQSEHSSLRVMEHENSKILNAKGELSEENVASYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGH TTRVTSGEEAISSASGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLLGETEPKSNEQSVKSQDQSTEILPESDKGQT TRESGEVSTDPSALPEGESIQGVKGKEEQEKSKELDRDKEKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRD LIDQLTVEFCYLNSKSNRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETK IKNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKNVKNLDPR HSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLLKCFMKVYKGKYGQIH LIASLAAGLSRYHDEFAVAIVDEVLEEIRIGLELNDYGMQQRRVAYMRFLGELYNYKHADSSVIFETLYLILVYGHGTPE QDVLDPPEDFFRIRLIITLLETCGHYFDHGSSKRKLDRFLIHFQRYILSKGALPLDVEFDLQDLFVDLRPNMVRYSSIEE VNAALVELEEHDRIVSADKASGEKQSEKPPRRTTSSMVVGNGQSIDNGAEDNGVQDDVNDGEADSGSDVIDEEGHDDDGL DEENHDDGSGTEDEDDDEGPGPASDEEDEVHVRQKVTEVDPLEEASFDQELKAVLQESMEQRRLELRGRPTLNMMIPMNV FEGSAKDHHGRGTGGESGDEALDEDTDGNKEVQVKVLVKRGNKQQTKQMYIPRNSSLVQSTKQKEAAELQEKEDIKRLVL EYNDREEEELNGLGTQPTNWMQSGGYRGGGRGYTSEGTGGRSGGSRHRHHYPGSGFYYSRRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 159 | 159 | - | – | |
| Gene3D | 7 | 316 | 310 | 1.9E-78 | ||
| PANTHER | 11 | 1178 | 1168 | 0.0 | ||
| PANTHER | 11 | 1178 | 1168 | 0.0 | – | |
| SMART | 54 | 276 | 223 | 0.12 | ||
| Coils | 54 | 81 | 28 | - | – | |
| SUPERFAMILY | 73 | 187 | 115 | 6.91E-10 | ||
| Phobius | 160 | 180 | 21 | - | – | |
| Phobius | 181 | 1182 | 1002 | - | – | |
| MobiDBLite | 308 | 338 | 31 | - | – | |
| MobiDBLite | 374 | 395 | 22 | - | – | |
| MobiDBLite | 374 | 458 | 85 | - | – | |
| MobiDBLite | 421 | 458 | 38 | - | – | |
| Coils | 425 | 445 | 21 | - | – | |
| Gene3D | 432 | 665 | 234 | 2.4E-38 | ||
| SUPERFAMILY | 464 | 658 | 195 | 1.52E-55 | ||
| SMART | 467 | 655 | 189 | 2.0E-48 | ||
| Pfam | 470 | 654 | 185 | 5.7E-32 | ||
| Coils | 538 | 558 | 21 | - | – | |
| SUPERFAMILY | 665 | 890 | 226 | 1.44E-64 | ||
| Gene3D | 666 | 895 | 230 | 1.8E-92 | ||
| SMART | 670 | 871 | 202 | 1.6E-41 | ||
| Pfam | 672 | 865 | 194 | 3.0E-39 | ||
| MobiDBLite | 896 | 910 | 15 | - | – | |
| MobiDBLite | 896 | 1007 | 112 | - | – | |
| MobiDBLite | 911 | 930 | 20 | - | – | |
| MobiDBLite | 933 | 984 | 52 | - | – | |
| Pfam | 985 | 1121 | 137 | 6.1E-36 | ||
| MobiDBLite | 985 | 1007 | 23 | - | – | |
| MobiDBLite | 1044 | 1066 | 23 | - | – | |
| MobiDBLite | 1044 | 1058 | 15 | - | – | |
| MobiDBLite | 1128 | 1182 | 55 | - | – | |
| MobiDBLite | 1164 | 1182 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0212500.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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