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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1550260 |
| Transcript ID | Lj2g3v1550260.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 268 | 268 | 0 | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 1 | 268 | 268 | 0 | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 2 | 12 | 11 | – | – | |
| Phobius | 13 | 20 | 8 | – | – | |
| Phobius | 21 | 600 | 580 | – | – | |
| Pfam | 26 | 65 | 40 | 3.60E-12 | ||
| Gene3D | 26 | 304 | 279 | 1.20E-53 | ||
| SUPERFAMILY | 27 | 280 | 254 | 1.36E-43 | ||
| SMART | 116 | 140 | 25 | 82 | ||
| ProSiteProfiles | 118 | 140 | 23 | 4.501 | ||
| ProSiteProfiles | 142 | 164 | 23 | 5.178 | ||
| SMART | 188 | 217 | 30 | 200 | ||
| ProSiteProfiles | 190 | 211 | 22 | 5.048 | ||
| ProSiteProfiles | 244 | 266 | 23 | 5.879 | ||
| Gene3D | 305 | 576 | 272 | 8.00E-74 | ||
| PANTHER | 310 | 954 | 645 | 0 | – | |
| PANTHER | 310 | 954 | 645 | 0 | – | |
| SUPERFAMILY | 321 | 576 | 256 | 8.16E-63 | ||
| ProSiteProfiles | 322 | 345 | 24 | 5.402 | ||
| Pfam | 346 | 405 | 60 | 1.50E-08 | ||
| SMART | 392 | 416 | 25 | 31 | ||
| ProSiteProfiles | 394 | 416 | 23 | 5.633 | ||
| ProSiteProfiles | 418 | 439 | 22 | 7.581 | ||
| SMART | 440 | 465 | 26 | 66 | ||
| ProSiteProfiles | 442 | 465 | 24 | 5.402 | ||
| ProSiteProfiles | 467 | 489 | 23 | 4.971 | ||
| ProSiteProfiles | 491 | 514 | 24 | 5.856 | ||
| Pfam | 491 | 550 | 60 | 4.20E-07 | ||
| SMART | 513 | 536 | 24 | 26 | ||
| ProSiteProfiles | 515 | 537 | 23 | 6.164 | ||
| Gene3D | 592 | 661 | 70 | 5.80E-10 | ||
| Phobius | 601 | 623 | 23 | – | – | |
| TMHMM | 601 | 623 | 23 | – | – | |
| Phobius | 624 | 969 | 346 | – | – | |
| SUPERFAMILY | 629 | 954 | 326 | 4.51E-68 | ||
| ProSiteProfiles | 656 | 962 | 307 | 35.99 | ||
| SMART | 656 | 962 | 307 | 7.30E-30 | ||
| Pfam | 659 | 884 | 226 | 4.50E-40 | ||
| ProSitePatterns | 662 | 685 | 24 | – | ||
| Gene3D | 662 | 744 | 83 | 4.30E-20 | – | |
| Gene3D | 745 | 958 | 214 | 3.60E-36 | – | |
| ProSitePatterns | 787 | 799 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v1550260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1550260.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.