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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1078300 |
| Transcript ID | Lj6g3v1078300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356514447|ref|XP_003525917.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| PANTHER | 9 | 633 | 625 | 0 | – | |
| PANTHER | 9 | 633 | 625 | 0 | – | |
| Phobius | 15 | 22 | 8 | – | – | |
| Phobius | 23 | 422 | 400 | – | – | |
| SUPERFAMILY | 42 | 419 | 378 | 7.37E-68 | ||
| Gene3D | 43 | 247 | 205 | 3.40E-50 | ||
| Pfam | 81 | 125 | 45 | 5.40E-11 | ||
| SMART | 89 | 111 | 23 | 0.0022 | ||
| SMART | 89 | 107 | 19 | 14 | – | |
| ProSiteProfiles | 91 | 112 | 22 | 8.259 | ||
| PRINTS | 92 | 105 | 14 | 1.30E-05 | – | |
| SMART | 112 | 136 | 25 | 47 | ||
| SMART | 112 | 135 | 24 | 580 | – | |
| ProSiteProfiles | 114 | 126 | 13 | 5.394 | ||
| SMART | 160 | 184 | 25 | 1.9 | ||
| ProSiteProfiles | 162 | 183 | 22 | 5.687 | ||
| Pfam | 183 | 200 | 18 | 1.2 | ||
| ProSiteProfiles | 186 | 208 | 23 | 5.54 | ||
| ProSiteProfiles | 211 | 233 | 23 | 5.733 | ||
| SMART | 232 | 255 | 24 | 410 | ||
| Gene3D | 256 | 418 | 163 | 4.40E-29 | ||
| ProSiteProfiles | 256 | 278 | 23 | 4.516 | ||
| SMART | 280 | 303 | 24 | 20 | – | |
| ProSiteProfiles | 282 | 302 | 21 | 5.895 | ||
| ProSiteProfiles | 306 | 329 | 24 | 5.671 | ||
| SMART | 328 | 352 | 25 | 60 | ||
| ProSiteProfiles | 330 | 352 | 23 | 5.902 | ||
| PRINTS | 352 | 365 | 14 | 1.30E-05 | – | |
| ProSiteProfiles | 354 | 375 | 22 | 5.463 | ||
| SMART | 374 | 389 | 16 | 570 | – | |
| SMART | 375 | 398 | 24 | 92 | ||
| Pfam | 376 | 393 | 18 | 0.33 | ||
| ProSiteProfiles | 376 | 398 | 23 | 7.897 | ||
| Phobius | 423 | 445 | 23 | – | – | |
| TMHMM | 423 | 445 | 23 | – | – | |
| Phobius | 446 | 456 | 11 | – | – | |
| TMHMM | 457 | 479 | 23 | – | – | |
| Phobius | 457 | 477 | 21 | – | – | |
| Gene3D | 472 | 610 | 139 | 4.90E-23 | – | |
| Phobius | 478 | 856 | 379 | – | – | |
| SUPERFAMILY | 525 | 641 | 117 | 1.25E-63 | ||
| ProSiteProfiles | 547 | 855 | 309 | 32.838 | ||
| Pfam | 551 | 847 | 297 | 7.20E-35 | ||
| Gene3D | 611 | 632 | 22 | 1.60E-34 | – | |
| PANTHER | 652 | 848 | 197 | 0 | – | |
| PANTHER | 652 | 848 | 197 | 0 | – | |
| Gene3D | 672 | 845 | 174 | 1.60E-34 | – | |
| SUPERFAMILY | 673 | 848 | 176 | 1.25E-63 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v1078300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1078300.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.