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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0141500 |
| Transcript ID | LotjaGi3g1v0141500.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent helicase hrq1; TAIR: AT1G20960.1 U5 small nuclear ribonucleoprotein helicase; Swiss-Prot: sp|Q9SYP1|DEXHC_ARATH DExH-box ATP-dependent RNA helicase DExH12; TrEMBL-Plants: tr|G7IJ55|G7IJ55_MEDTR U5 small nuclear ribonucleoprotein 200 kDa helicase; Found in the gene: LotjaGi3g1v0141500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:18748967..18756137) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCGCATCTCGGCGGTGGCGCGGAGGCGCACGCGCGGTTCAAGCAGTACGAGTACCGCGCCAACTCCAGCCTCGTCCT CACCACCGACTCTCGCCCCCGCGACACCCACGAACCCACCGGGGAGCCCGAGTCCCTCTGGGGCAAAATCGACCCCAAAA GCTTCGGAGATCGCGCCTTCCGCGGCCGCCCCCCTGAGCTCGACGAGAAGGCCGCCGCCGCCGCTCTCAAGAAGAGTAAG AAGAAGAAGGACCGCGACCCTGACGCCGCCGCGTCTTCCCGCCGCGCGAAGCGCCGGCGCTTACAGGAGGAGAGTGTTCT CACTGCCTCTGATGAGGGGGTTTACCAGCCCAAGACTAAGGAGACCCGTGCCGCGTACGAGGCCATGTTGAGCGTTATTC AGCAGCAGCTTGGCGGGCAGCCGCTGAGTATAGTCAGCGGCGCCGCCGATGAGATCCTTGCTGTGTTGAAGAACGATGTG TTTAAGAATTCGGAGAAGAAGAAGGAGATTGAGAAGCTGCTTAATCATATCCCTGACAATGTTTTTGACCAGATGGTGTC TATTGGTAAGCTGATTACTGATTTTCAGGAGGCCGGGGATGCGCCCGCGGCGGCTGATGGGGATGGGGGGCTTGATGATG ATGTTGGTGTGGCGGTTGAGTTTGAAGAGAATGAGGAGGATGATGATGAGAGTGATCTTGATGTGGTGCAGGAAGAGGAA GAGGATGAGGATGATCTTGCTGAACCGAACGCGTCGTCGGGTATGCAAATGGGTGGTGGGATTGATGATGAGGATATGGA GGAAGCTAATGAAGGGATGAACCTCAATGTGCAGGATATTGATGCTTATTGGCTTCAGAGGAAAATCTCTCAGGCGTTTG AGCAGCAGATTGACCCGCAGCAATGCCAGAAGCTTGCTGAGGAAGTGCTTAAGATTCTGGCTGTGGCTGATGACAGGGAA GTGGAGAACAAGTTGTTGTTTCACCTGGAGTTTGACAAGTTCAGCCTGATTAAGTTTCTGTTGCGGAATAGGCTGAAGAT TGTGTGGTGTACCCGGTTAGCGAGGGCGCAGGATCAGGAAGAGAGGGAGAAGATTGAGGAGGAGATGAAGGGTACGGAGT TGCAGCCAATTTTGGAGCAGCTGCATGCTACTAGGGCCTCTGCTAAGGAGAGGCAGAAGAACTTGGAGAAGAGTATAAGG GAAGAGGCTCGTAGGTTGAAGGATGATACTACTGGTACTGGTAATGGAGATGGGGATAGGGACAGGGAGAAGGATAGAAG TAGGAGTAGGGGAGTTTCTGAGAGAGATGCAGAGAGTGGGTGGTTGAAGGGTCAGCGCCAGATGCTTGATTTTGATAGCC TTGCATTTCATCAAGGTGGGTTCTTGATGGCTAACAGGTGTGATCTGCCTGATGGGTCTTATAGGCATCTAAGCAAGGGT TATGAAGAAATCCACGTGCCCGCCTTGAAGGCTAAACCCCTTGATTCTAATGAGAAGCTTGTAAAAATATCTTCTATACC TGATTGGGCACAACCCGCCTTTAAAGGAATGACGCAGCTGAATAGGGTTCAGAGCAAGGTCTATGAGACGGCACTCTTCA GGCCTGATAATCTTCTGCTTTGTGCTCCAACTGGGGCTGGAAAAACTAATGTTGCAGTTCTCACGATGCTTCAGCAAATT GCGAGGCACAGGAATCCTGAGGATGGTTCCATTGACCACAGTGCTTATAAGATTGTTTATGTTGCGCCTATGAAAGCTCT CGTGGCTGAGGTTGTAGGGAATTTGTCCAATCGTTTGCAGGAATATGGTGTTACAGTTAGGGAGCTCAGTGGAGACCAGT CTCTGACCCGTCGGCAAATAGAAGAGACTCAAATTATTGTGACAACTCCTGAGAAGTGGGATATTATCACTCGAAAGTCA GGAGATCGAACTTACACGCAGCTTGTGAAGCTTCTTATCATTGATGAGATTCATCTTCTTCACGATAACAGAGGGCCTGT TCTTGAAAGTATTGTTGCTAGAACAGTTAGGCAGATAGAAACCACGAAGGACTATATTCGGTTGGTGGGGTTGTCTGCTA CCCTTCCTAATTATGAAGATGTGGCACTGTTTTTGCGTGTTGATCTTAACAAGGGGTTGTTTTATTTTGATAATAGTTAT AGGCCTGTTCCTCTTTCTCAACAGTATATTGGAATCACAGTTAAGAAGCCGCTTCAGAGGTTCCAGTTGATGAATGATAT CTGTTACGAGAAAGTTTTAGGTGTAGCTGGAAAGCATCAGGTTCTTATCTTTGTACATTCAAGGAAAGAAACTGCTAAAA CTGCTAGAGCCATCAGAGATACTGCACTTGCAAATGATACTCTTGGTAGGTTCCTTAAAGAAGATAGTGCTAGTCGCGAG ATTCTTCACTCTCATACTGAACTTGTGAGGAGCAATGATCTTAAAGATCTTCTGCCCTATGGTTTTGCAATTCATCATGC TGGTATGAACAGGGCAGATCGCAATCTTGTTGAGGATCTCTTTGCTGATGGTCATGTGCAAGTTTTGGTATCCACTGCGA CCCTTGCTTGGGGTGTGAATCTCCCAGCTCATACAGTGATAATAAAAGGGACACAGATATACAATCCTGAAAAGGGTGCC TGGACTGAACTTAGTCCTCTTGATGTGATGCAGATGTTGGGTCGTGCTGGAAGGCCCCAGTATGACTCATATGGTGAAGG AATAATTCTTACTGGCCATAGTGAGTTGCAGTATTACCTCTCTCTTATGAACCAACAACTTCCTATTGAGAGCCAGTTTG TGTCCAAGCTGGCCGATCAGCTGAATGCAGAAATTGTTCTTGGTACTGTTCAAAATGCCAGGGAAGCCTGTAATTGGATT GGATACACTTACTTGTATGTCCGTATGTTAAGGAATCCTTCTCTATATGGTTTAGCACCAGATGTCCTGAAGAGAGATAT AACATTGGAGGAGAGAAGAGCTGATTTGGTAAGCATTTCTATCACCTAGTTTATCATCCTGTTATTACCTGAACTAAACT GATATCTGTTAGGTTTATTTCCTTTCTGTCTTCCTGGTTGCATTTGTGCTTGTCGTTGCTATGGTTTTTTGTACAATTGC ATGAGAAGGGAGCTGAAGCTGTCACTGTAAAAATTACCCATCCTAGTTGGAGGAGATAGGCTCTTGTTCCTTTTTCTTCA GTTTGATTTTCTCCTATGTGTATCTTCTTTCAAATAATATTCGATGTAGAAATTTCTGGATATACATTGTCCGTGCGCTT TAACGATTTTATGGCTAATACTGATCTCATTGAAATCTTGCAGATTCATACAGCAGCAACCATATTAGATAAAAATAATT TGGTGAAGTATGATAGGAAGAGCGGATATTTTCAGGTCACCGACTTGGGTCGAATTGCAAGCTACTACTACATAACGCAT GGAACCATATCCACATATAATGAGCACTTAAAGCCTACAATGGGGGATATAGAGCTTTGTCGATTGTTCTCATTGAGTGA AGAATTCAAGTATGTGACAGTAAGACAGGATGAGAAGATGGAGCTAGCAAAGCTTTTGGAACGAGTTCCCATTCCCATCA AGGAAAGTCTGGAAGAGCCAAGTGCCAAGATCAATGTTTTGCTGCAAGCATACATTTCACAATTAAAGCTTGAAGGGCTA TCACTGACATCTGATATGGTCTTTATAACTCAGGTTAGACTTCATTCCTTACCATTGTTAGAAAATGAATGGAAATGGTG CCTTTCATATATTGTGTTTCTACTGATTCATGTGCTTTATTTCTCTCATGTAGAGTGCTGGACGCCTTTTGCGGGCTCTT TTTGAGATTGTCCTGAAACGTGGCTGGGCACAGTTGGCTGAAAAGGCTTTGAATTTATGCAAGATGGTGACCAAGAGGAT GTGGAGTGTCCAAACACCTCTTCGTCAGTTCAATGGAATCCCAAGTGATGTATTAACGAAGTTGGAAAAGAAAGATTTGG CCTGGGAAAGGTATTATGACCTATCACCACAAGAGATAAGTGAACTCATTCGTGCAACCAAGATGGGAAGGACACTTCAT AAATTTATCCACCAATTTCCAAAACTGAACCTTGCAGCACATGTGCAGCCAATTACTCGCACGGTTTTGGGGGTTGAACT CACAATAACTCCGGATTTTGCATGGGATGACAATATCCATGGATATGTTGAGCCATTCTGGGTGATTGTGGAGGATAATG ATGGTGAATATATTCTTCATCATGAGTATTTTTTGCTGAAAAAGCAATATATTGATGAGGATCATACTCTGAATTTCACA GTGCCAATATACGAGCCTCTTCCTCCTCAATACTTTATCTGTGTTGTTTCAGATAAATGGCTTGGATCACAAACTGTTTT ACCTGTTTCATTCAGGCATCTAATCTTACCTGAAAAGTATCCTCCACCAACTGAGCTATTGGATCTGCAGCCACTGCCCG TAACTGCCTTACGAAATCCATCATATGAAGCTCTTTATCAGGTCTTTAAGCATTTTAATCCTGTTCAGACACAAGTCTTC ACAGTTCTGTATAATTCTGATGACAATGTCTTAGTTGCTGCTCCAACAGGGAGTGGTAAGACTATATGTGCAGAATTTGC TATATTGAGGAATCATCAAAAAGTGCCTGATAGTGTTATGCGTGTTGTTTATATTGCTCCCATTGAAGCTCTTGCCAAGG AACGGTATCGTGACTGGGAGAGGAAATTTGGTGGTGGTCTTAAATTAAGGGTAGTTGAATTGACTGGAGAAACAGCGACA GACTTGAAACTACTTGAGAAGAGTCAGATTATTATTAGCACTCCGGAGAAATGGGATGCTCTATCCCGCCGCTGGAAACA GAGGAAACAAGTTCAACAAGTTAGTCTTTTTATCATTGATGAGCTCCACTTAATTGGGGGTCAAGGAGGTCCTGTTTTAG AGGTTATTGTTTCCAGGATGAGATATATTGCTAGTCAGGTTGAGAACAAAATTCGTATTGTGGCTCTGTCAACCTCACTT GCGAATGCAAAGGATCTGGGAGAATGGATTGGAGCTACCTCCCATGGCCTTTTCAATTTCCCCCCTGGTGTTCGTCCTGT GCCTTTGGAAATACACATTCAGGGTATAGATATTGCCAATTTTGAGGCAAGGATGCAGGCAATGACAAAACCAACTTACA CTGCAATTGTTCAACATGCGAAGAATGGTAAACCTGCTCTTGTGTTTGTACCTACAAGGAAACATGTTCGGCTGACGGCT GTGGATCTGATAACTTACTCAGGTGCTGACAGTGGAGAGAAACCGTTTTTATTGCGGTCCATTGAAGAAATTGATCCTTT TCTTAACAAGATTAGTGATGAAATGTTGAAAGTCACTTTACGTGAAGGCGTGGGTTACTTGCATGAGGGCTTGAACAGTC TTGATCAAGACATTGTAACACAGCTATTTGAAGCTGGCTGGATTCAGGTCTGTGTTTTAAGCAGTTCCATGTGTTGGGGA TTGGCATTATCTGCTCATTTGGTAGTCGTGATGGGCACACAATACTATGATGGGCGGGAGAATGCACAGTCAGATTACCC TGTTACTGATCTTCTGCAGATGATGGGTCATGCCAGCCGACCTCTGGTGGATAATTCTGGAAAATGTGTCATCTTGTGCC ATGCACCTCGTAAGGAGTACTACAAGAAGTTCTTGTATGAAGCATTCCCGGTTGAAAGTCATCTTCATCACTTCCTACAT GATAACTTGAATGCTGAAATTGTTGCTGGAATTGTTGAAAACAAGCAAGATGCTGTAGATTATCTTACATGGACATTTAT GTACAGGCGGCTAACCCAGAATCCCAACTACTATAATTTACAAGGAGTTAGTCACAGGCATCTATCTGATCACCTCTCAG AGATGGTGGAGAATACATTGAGTGATTTAGAAGCGAGCAAGTGTGTTGCTATTGAGGATGATATGGACCTTTCTCCTCTC AATCTAGGAATGATAGCATCATATTATTACATCAGTTACACAACGATTGAAAGGTTTTCATCATCTTTGACCTCAAAAAC AAAAATGAAGGGTCTTTTGGAGGTTCTATCCTCAGCTTCAGAGTATGCTCAGCTTCCCATACGACCTGGGGAGGAAGAGG TGGTTCGTAGGTTAATTAATCACCAGAGGTTTTCCTTTGAAAATCCCAAAGTTACAGACCCACATGTTAAAGCTAATGCT TTGCTTCAGGCCCATTTCTCTAGGCAATCTGTTGGTGGGAACCTTTCATTGGACCAGAGAGAGGTGCTTCTTTCTTCAAG TAGACTTCTTCAGGCAATGGTTGATGTTATATCGAGCAGTGGTTGGCTCAGCCTGGCTCTTCTTGCTATGGAAGTTAGTC AAATGGTGACACAAGGGATGTGGGAACGTGACTCAATGCTACTGCAGCTTCCTCATTTTACGAAGGATTTGGCTAAGAGA TGCCAGGAGAACCCCGGGAAGAGTGTTGAAACTGTGTTTGATTTATTAGAGATGGAGGATGATGAGAGGCGTGAATTGTT GGGCATGTCAGATTCACAGTTGTTGGATATTGCTCGATTTTGCAACCGTTTTCCTAATATTGATTTGTCATATGACGTCC TGGACAGTGACAATGTGCGGGCTGGGGAGGATATCACAATACAGGTCACTCTTGAGCGGGATCTCGAGGGTAAGACAGAA GTAGGACCTGTTGATGCTCCCAGGTATCCAAAAGCAAAGGAGGAAGGATGGTGGCTTGTTGTTGGTGATACCAGAAACAA CTTGTTGCTTGCCATTAAACGTGTTTCCCTGCAACGGAAGTTGAAAGCCAAACTAGAGTTTGCTGCTCCAGCTGATGCTG GAAAGAAATCCTACGTGCTTTATTTCATGTGTGATTCATACATGGGGTGTGATCAGGAATATGGTTTCACTGTTGATGTT AAGGAAGCTGATGAAGATAGTGGCAAAGATTGAAAAGGTAGTTTTCCGGATTTTTTAGCATATTCTGCTTAGCTACTAGC TAGATCTAACAATATGTTATGAGTTTGGGCTTTTGGTAGCCTATAATATGTTAAAAATTCGTTCAATGTGCATAGGGATG GGGACCGACTTTGTTAGTGATTAAGTGGGCATATGGATGAGATATAATTGA
CDS sequence (LotjaGi3g1v0141500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGACCAAGAGGATGTGGAGTGTCCAAACACCTCTTCGTCAGTTCAATGGAATCCCAAGTGATGTATTAACGAAGTT GGAAAAGAAAGATTTGGCCTGGGAAAGGTATTATGACCTATCACCACAAGAGATAAGTGAACTCATTCGTGCAACCAAGA TGGGAAGGACACTTCATAAATTTATCCACCAATTTCCAAAACTGAACCTTGCAGCACATGTGCAGCCAATTACTCGCACG GTTTTGGGGGTTGAACTCACAATAACTCCGGATTTTGCATGGGATGACAATATCCATGGATATGTTGAGCCATTCTGGGT GATTGTGGAGGATAATGATGGTGAATATATTCTTCATCATGAGTATTTTTTGCTGAAAAAGCAATATATTGATGAGGATC ATACTCTGAATTTCACAGTGCCAATATACGAGCCTCTTCCTCCTCAATACTTTATCTGTGTTGTTTCAGATAAATGGCTT GGATCACAAACTGTTTTACCTGTTTCATTCAGGCATCTAATCTTACCTGAAAAGTATCCTCCACCAACTGAGCTATTGGA TCTGCAGCCACTGCCCGTAACTGCCTTACGAAATCCATCATATGAAGCTCTTTATCAGGTCTTTAAGCATTTTAATCCTG TTCAGACACAAGTCTTCACAGTTCTGTATAATTCTGATGACAATGTCTTAGTTGCTGCTCCAACAGGGAGTGGTAAGACT ATATGTGCAGAATTTGCTATATTGAGGAATCATCAAAAAGTGCCTGATAGTGTTATGCGTGTTGTTTATATTGCTCCCAT TGAAGCTCTTGCCAAGGAACGGTATCGTGACTGGGAGAGGAAATTTGGTGGTGGTCTTAAATTAAGGGTAGTTGAATTGA CTGGAGAAACAGCGACAGACTTGAAACTACTTGAGAAGAGTCAGATTATTATTAGCACTCCGGAGAAATGGGATGCTCTA TCCCGCCGCTGGAAACAGAGGAAACAAGTTCAACAAGTTAGTCTTTTTATCATTGATGAGCTCCACTTAATTGGGGGTCA AGGAGGTCCTGTTTTAGAGGTTATTGTTTCCAGGATGAGATATATTGCTAGTCAGGTTGAGAACAAAATTCGTATTGTGG CTCTGTCAACCTCACTTGCGAATGCAAAGGATCTGGGAGAATGGATTGGAGCTACCTCCCATGGCCTTTTCAATTTCCCC CCTGGTGTTCGTCCTGTGCCTTTGGAAATACACATTCAGGGTATAGATATTGCCAATTTTGAGGCAAGGATGCAGGCAAT GACAAAACCAACTTACACTGCAATTGTTCAACATGCGAAGAATGGTAAACCTGCTCTTGTGTTTGTACCTACAAGGAAAC ATGTTCGGCTGACGGCTGTGGATCTGATAACTTACTCAGGTGCTGACAGTGGAGAGAAACCGTTTTTATTGCGGTCCATT GAAGAAATTGATCCTTTTCTTAACAAGATTAGTGATGAAATGTTGAAAGTCACTTTACGTGAAGGCGTGGGTTACTTGCA TGAGGGCTTGAACAGTCTTGATCAAGACATTGTAACACAGCTATTTGAAGCTGGCTGGATTCAGGTCTGTGTTTTAAGCA GTTCCATGTGTTGGGGATTGGCATTATCTGCTCATTTGGTAGTCGTGATGGGCACACAATACTATGATGGGCGGGAGAAT GCACAGTCAGATTACCCTGTTACTGATCTTCTGCAGATGATGGGTCATGCCAGCCGACCTCTGGTGGATAATTCTGGAAA ATGTGTCATCTTGTGCCATGCACCTCGTAAGGAGTACTACAAGAAGTTCTTGTATGAAGCATTCCCGGTTGAAAGTCATC TTCATCACTTCCTACATGATAACTTGAATGCTGAAATTGTTGCTGGAATTGTTGAAAACAAGCAAGATGCTGTAGATTAT CTTACATGGACATTTATGTACAGGCGGCTAACCCAGAATCCCAACTACTATAATTTACAAGGAGTTAGTCACAGGCATCT ATCTGATCACCTCTCAGAGATGGTGGAGAATACATTGAGTGATTTAGAAGCGAGCAAGTGTGTTGCTATTGAGGATGATA TGGACCTTTCTCCTCTCAATCTAGGAATGATAGCATCATATTATTACATCAGTTACACAACGATTGAAAGGTTTTCATCA TCTTTGACCTCAAAAACAAAAATGAAGGGTCTTTTGGAGGTTCTATCCTCAGCTTCAGAGTATGCTCAGCTTCCCATACG ACCTGGGGAGGAAGAGGTGGTTCGTAGGTTAATTAATCACCAGAGGTTTTCCTTTGAAAATCCCAAAGTTACAGACCCAC ATGTTAAAGCTAATGCTTTGCTTCAGGCCCATTTCTCTAGGCAATCTGTTGGTGGGAACCTTTCATTGGACCAGAGAGAG GTGCTTCTTTCTTCAAGTAGACTTCTTCAGGCAATGGTTGATGTTATATCGAGCAGTGGTTGGCTCAGCCTGGCTCTTCT TGCTATGGAAGTTAGTCAAATGGTGACACAAGGGATGTGGGAACGTGACTCAATGCTACTGCAGCTTCCTCATTTTACGA AGGATTTGGCTAAGAGATGCCAGGAGAACCCCGGGAAGAGTGTTGAAACTGTGTTTGATTTATTAGAGATGGAGGATGAT GAGAGGCGTGAATTGTTGGGCATGTCAGATTCACAGTTGTTGGATATTGCTCGATTTTGCAACCGTTTTCCTAATATTGA TTTGTCATATGACGTCCTGGACAGTGACAATGTGCGGGCTGGGGAGGATATCACAATACAGGTCACTCTTGAGCGGGATC TCGAGGGTAAGACAGAAGTAGGACCTGTTGATGCTCCCAGGTATCCAAAAGCAAAGGAGGAAGGATGGTGGCTTGTTGTT GGTGATACCAGAAACAACTTGTTGCTTGCCATTAAACGTGTTTCCCTGCAACGGAAGTTGAAAGCCAAACTAGAGTTTGC TGCTCCAGCTGATGCTGGAAAGAAATCCTACGTGCTTTATTTCATGTGTGATTCATACATGGGGTGTGATCAGGAATATG GTTTCACTGTTGATGTTAAGGAAGCTGATGAAGATAGTGGCAAAGATTGA
Protein sequence (LotjaGi3g1v0141500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVTKRMWSVQTPLRQFNGIPSDVLTKLEKKDLAWERYYDLSPQEISELIRATKMGRTLHKFIHQFPKLNLAAHVQPITRT VLGVELTITPDFAWDDNIHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFICVVSDKWL GSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQVFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKT ICAEFAILRNHQKVPDSVMRVVYIAPIEALAKERYRDWERKFGGGLKLRVVELTGETATDLKLLEKSQIIISTPEKWDAL SRRWKQRKQVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLANAKDLGEWIGATSHGLFNFP PGVRPVPLEIHIQGIDIANFEARMQAMTKPTYTAIVQHAKNGKPALVFVPTRKHVRLTAVDLITYSGADSGEKPFLLRSI EEIDPFLNKISDEMLKVTLREGVGYLHEGLNSLDQDIVTQLFEAGWIQVCVLSSSMCWGLALSAHLVVVMGTQYYDGREN AQSDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIVENKQDAVDY LTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSS SLTSKTKMKGLLEVLSSASEYAQLPIRPGEEEVVRRLINHQRFSFENPKVTDPHVKANALLQAHFSRQSVGGNLSLDQRE VLLSSSRLLQAMVDVISSSGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSVETVFDLLEMEDD ERRELLGMSDSQLLDIARFCNRFPNIDLSYDVLDSDNVRAGEDITIQVTLERDLEGKTEVGPVDAPRYPKAKEEGWWLVV GDTRNNLLLAIKRVSLQRKLKAKLEFAAPADAGKKSYVLYFMCDSYMGCDQEYGFTVDVKEADEDSGKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 170 | 170 | 5.7E-6 | ||
| Pfam | 1 | 168 | 168 | 1.5E-29 | ||
| PANTHER | 1 | 1025 | 1025 | 0.0 | – | |
| SUPERFAMILY | 1 | 66 | 66 | 3.92E-10 | – | |
| PANTHER | 1 | 1025 | 1025 | 0.0 | – | |
| Gene3D | 9 | 64 | 56 | 9.9E-26 | – | |
| Gene3D | 65 | 173 | 109 | 4.6E-48 | ||
| SUPERFAMILY | 96 | 397 | 302 | 7.08E-51 | ||
| Gene3D | 174 | 404 | 231 | 2.1E-92 | – | |
| SMART | 207 | 413 | 207 | 3.0E-24 | ||
| CDD | 208 | 399 | 192 | 1.28259E-119 | – | |
| Pfam | 213 | 381 | 169 | 5.4E-25 | ||
| ProSiteProfiles | 220 | 397 | 178 | 21.147 | ||
| SUPERFAMILY | 399 | 609 | 211 | 1.36E-35 | ||
| CDD | 404 | 593 | 190 | 3.39258E-36 | – | |
| Gene3D | 406 | 611 | 206 | 3.0E-61 | – | |
| ProSiteProfiles | 458 | 638 | 181 | 7.601 | ||
| SMART | 493 | 581 | 89 | 0.0078 | ||
| SUPERFAMILY | 609 | 710 | 102 | 2.15E-9 | ||
| Gene3D | 612 | 698 | 87 | 3.8E-38 | – | |
| SMART | 698 | 1017 | 320 | 3.2E-107 | ||
| Pfam | 698 | 1015 | 318 | 1.9E-75 | ||
| Gene3D | 702 | 842 | 141 | 2.9E-49 | – | |
| SUPERFAMILY | 727 | 904 | 178 | 1.1E-53 | – | |
| Gene3D | 843 | 903 | 61 | 1.5E-26 | – | |
| Gene3D | 904 | 1029 | 126 | 4.8E-45 | ||
| SUPERFAMILY | 905 | 1021 | 117 | 2.1E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi3g1v0141500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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