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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000719
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 3339 results. Now displaying 9 of 67 with 50 rows per page. This search has taken 5.896s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0352869.2
n.a. PREDICTED: CDPK-related protein kinase-like [Glycine max] gi|356520241|ref|XP_003528772.1| chr0 185603690 185607556 +
4 domain predictions
3 GO terms
Lj0g3v0356809.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Glycine max] gi|356495063|ref|XP_003516400.1| chr0 187910217 187913635 -
2 domain predictions
3 GO terms
Lj0g3v0356899.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Cicer arietinum] gi|502084183|ref|XP_004487641.1| chr0 187938143 187941462 -
3 domain predictions
3 GO terms
Lj0g3v0357589.1
n.a. PREDICTED: glycogen synthase kinase-3 homolog MsK-1-like isoform X4 [Cicer arietinum] gi|502116888|ref|XP_004495628.1| chr0 188293090 188295847 +
4 domain predictions
3 GO terms
Lj0g3v0358399.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357453577|ref|XP_003597066.1| chr0 188648804 188654509 -
3 domain predictions
3 GO terms
Lj0g3v0358569.1
n.a. PREDICTED: mitogen-activated protein kinase 19-like [Cicer arietinum] gi|502087941|ref|XP_004488688.1| chr0 188757595 188760493 +
4 domain predictions
3 GO terms
Lj0g3v0359489.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857016|dbj|BAD95893.1| chr0 189254577 189257740 -
4 domain predictions
3 GO terms
Lj0g3v0359679.1
n.a. PREDICTED: serine/threonine-protein kinase BRI1-like 1-like [Cicer arietinum] gi|502127369|ref|XP_004499678.1| chr0 189379633 189384247 +
4 domain predictions
3 GO terms
Lj0g3v0360899.1
n.a. PREDICTED: protein kinase APK1A, chloroplastic-like isoform 1 [Glycine max] gi|356501055|ref|XP_003519344.1| chr0 190088399 190092124 +
3 domain predictions
3 GO terms
Lj0g3v0361919.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940-like isoform X1 [Cicer arietinum] gi|502080122|ref|XP_004486464.1| chr0 190714722 190719641 +
2 domain predictions
3 GO terms
Lj0g3v0361919.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940-like isoform X1 [Cicer arietinum] gi|502080122|ref|XP_004486464.1| chr0 190714835 190719641 +
2 domain predictions
3 GO terms
Lj0g3v0364369.1
n.a. protein kinase-related protein precursor [Glycine max] gi|351725755|ref|NP_001235056.1| chr0 192264519 192268730 -
4 domain predictions
3 GO terms
Lj1g3v0052330.1
n.a. cysteine-rich protein precursor [Glycine max] gi|351721533|ref|NP_001238492.1| chr1 448340 451345 -
3 domain predictions
3 GO terms
Lj1g3v0052350.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357480737|ref|XP_003610654.1| chr1 454027 457186 -
4 domain predictions
3 GO terms
Lj1g3v0052360.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357480739|ref|XP_003610655.1| chr1 459111 462277 -
3 domain predictions
3 GO terms
Lj1g3v0112890.1
n.a. PREDICTED: probable inactive serine/threonine-protein kinase lvsG-like [Cicer arietinum] gi|502119578|ref|XP_004496667.1| chr1 1161393 1174978 +
2 domain predictions
3 GO terms
Lj1g3v0112960.1
n.a. Leucine-rich repeat protein kinase family protein isoform 1 [Theobroma cacao] gi|508713910|gb|EOY05807.1| chr1 1212000 1218600 +
4 domain predictions
3 GO terms
Lj1g3v0114180.1
n.a. PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Cicer arietinum] gi|502159045|ref|XP_004511375.1| chr1 1302128 1306278 +
3 domain predictions
3 GO terms
Lj1g3v0131260.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3-like isoform X1 [Cicer arietinum] gi|502088124|ref|XP_004488741.1| chr1 1766823 1774059 -
4 domain predictions
3 GO terms
Lj1g3v0173660.1
n.a. PREDICTED: CBL-interacting serine/threonine-protein kinase 8-like [Glycine max] gi|356500781|ref|XP_003519209.1| chr1 1943443 1949004 +
4 domain predictions
3 GO terms
Lj1g3v0177810.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] gi|359497026|ref|XP_003635401.1| chr1 2016830 2021310 +
3 domain predictions
3 GO terms
Lj1g3v0251240.1
n.a. Serine-threonine protein kinase [Medicago truncatula] gi|357489739|ref|XP_003615157.1| chr1 2728288 2731871 +
4 domain predictions
3 GO terms
Lj1g3v0268780.1
n.a. protein kinase family protein [Glycine max] gi|351727927|ref|NP_001238713.1| chr1 3052098 3056106 -
4 domain predictions
3 GO terms
Lj1g3v0296890.1
n.a. ZIK1 protein [Medicago sativa] gi|28874836|emb|CAC84087.1| chr1 3524911 3528935 +
4 domain predictions
3 GO terms
Lj1g3v0318450.1
n.a. PREDICTED: casein kinase I isoform delta-like [Cicer arietinum] gi|502124307|ref|XP_004498472.1| chr1 3799661 3812312 -
4 domain predictions
3 GO terms
Lj1g3v0318450.2
n.a. PREDICTED: casein kinase I isoform delta-like [Cicer arietinum] gi|502124307|ref|XP_004498472.1| chr1 3799661 3812312 -
4 domain predictions
3 GO terms
Lj1g3v0395850.1
n.a. Serine/threonine-protein kinase/endoribonuclease ire-1 [Triticum urartu] gi|474390985|gb|EMS65329.1| chr1 4499654 4500778 +
2 domain predictions
3 GO terms
Lj1g3v0410200.1
n.a. Fibroblast growth factor receptor [Medicago truncatula] gi|357461999|ref|XP_003601281.1| chr1 4711893 4716725 -
3 domain predictions
3 GO terms
Lj1g3v0415090.1
n.a. PREDICTED: probable inactive receptor kinase At2g26730-like [Glycine max] gi|356518991|ref|XP_003528158.1| chr1 5130270 5133165 -
3 domain predictions
3 GO terms
Lj1g3v0450070.1
n.a. PREDICTED: calcium-dependent protein kinase 10-like [Glycine max] gi|356507178|ref|XP_003522347.1| chr1 6037435 6042082 +
4 domain predictions
3 GO terms
Lj1g3v0526480.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360-like [Glycine max] gi|356519088|ref|XP_003528206.1| chr1 6611600 6615007 +
4 domain predictions
3 GO terms
Lj1g3v0536870.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max] gi|356516828|ref|XP_003527095.1| chr1 6695703 6700903 +
4 domain predictions
3 GO terms
Lj1g3v0672200.1
n.a. phosphoenolpyruvate carboxylase kinase [Lotus japonicus] gi|23503552|dbj|BAC20362.1| chr1 8655284 8655613 -
3 domain predictions
3 GO terms
Lj1g3v0694020.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140-like isoform X2 [Cicer arietinum] gi|502177298|ref|XP_004516050.1| chr1 8962713 8977545 -
3 domain predictions
3 GO terms
Lj1g3v0715600.1
n.a. PREDICTED: receptor-like protein kinase THESEUS 1-like [Cicer arietinum] gi|502153617|ref|XP_004509405.1| chr1 9407555 9417483 -
2 domain predictions
3 GO terms
Lj1g3v0809660.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 3-like isoform 1 [Glycine max] gi|356501661|ref|XP_003519642.1| chr1 10607004 10612204 +
4 domain predictions
3 GO terms
Lj1g3v0897610.1
n.a. PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670-like [Glycine max] gi|356515943|ref|XP_003526656.1| chr1 11338981 11343050 +
4 domain predictions
3 GO terms
Lj1g3v0912030.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK14-like [Cicer arietinum] gi|502136109|ref|XP_004502563.1| chr1 11564711 11566198 +
3 domain predictions
3 GO terms
Lj1g3v0934380.1
n.a. PREDICTED: probable inactive receptor kinase At4g23740-like [Glycine max] gi|356507598|ref|XP_003522551.1| chr1 11730957 11733726 +
2 domain predictions
3 GO terms
Lj1g3v1038370.1
n.a. PREDICTED: CDPK-related protein kinase-like [Glycine max] gi|356516120|ref|XP_003526744.1| chr1 13034029 13042307 -
3 domain predictions
3 GO terms
Lj1g3v1060470.1
n.a. Kinase-like protein [Medicago truncatula] gi|357464125|ref|XP_003602344.1| chr1 13106600 13110033 +
3 domain predictions
3 GO terms
Lj1g3v1113880.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502136730|ref|XP_004502808.1| chr1 13953318 13969716 +
3 domain predictions
3 GO terms
Lj1g3v1147540.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356507516|ref|XP_003522510.1| chr1 14216302 14220498 +
2 domain predictions
3 GO terms
Lj1g3v1207840.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like isoform X2 [Cicer arietinum] gi|502136842|ref|XP_004502858.1| chr1 14743901 14744464 -
3 domain predictions
3 GO terms
Lj1g3v1207870.1
n.a. PREDICTED: probable inactive receptor kinase At5g10020-like isoform X1 [Cicer arietinum] gi|502136840|ref|XP_004502857.1| chr1 14753957 14759281 -
3 domain predictions
3 GO terms
Lj1g3v1222370.1
n.a. PREDICTED: brassinosteroid LRR receptor kinase-like [Cicer arietinum] gi|502136882|ref|XP_004502878.1| chr1 14923173 14927479 -
4 domain predictions
3 GO terms
Lj1g3v1222380.1
n.a. Brassinosteroid receptor [Medicago truncatula] gi|357464445|ref|XP_003602504.1| chr1 14923489 14927479 -
4 domain predictions
3 GO terms
Lj1g3v1289070.1
n.a. PREDICTED: serine/threonine-protein kinase ULK3-like [Glycine max] gi|356508997|ref|XP_003523239.1| chr1 15303086 15304560 +
3 domain predictions
3 GO terms
Lj1g3v1289070.2
n.a. Serine/threonine protein kinase GE16371 [Medicago truncatula] gi|357464547|ref|XP_003602555.1| chr1 15303086 15306898 +
4 domain predictions
3 GO terms
Lj1g3v1289070.3
n.a. Serine/threonine protein kinase GE16371 [Medicago truncatula] gi|357464547|ref|XP_003602555.1| chr1 15303086 15306361 +
4 domain predictions
3 GO terms