Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013320
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 826 results. Now displaying 17 of 17 with 50 rows per page. This search has taken 5.572s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi5g1v0098900.1
n.a. Cell wall invertase; TAIR: AT2G36190.1 cell wall invertase 4; Swiss-Prot: sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1; TrEMBL-Plants: tr|A0A151U3J2|A0A151U3J2_CAJCA Beta-fructofuranosidase, insoluble isoenzyme 1; Found in the gene: LotjaGi5g1v0098900 LjG1.1_chr5 17797097 17799966 +
2 domain predictions
 –
LotjaGi5g1v0139800.1
n.a. Lectin receptor kinase; TAIR: AT5G06740.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9FG33|LRKS5_ARATH Probable L-type lectin-domain containing receptor kinase S.5; TrEMBL-Plants: tr|K7LD58|K7LD58_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0139800 LjG1.1_chr5 34369183 34371804 +
2 domain predictions
 –
LotjaGi5g1v0173300.1
n.a. WD repeat and FYVE domain-containing protein 3; TAIR: AT1G03060.2 BEACH-DOMAIN HOMOLOG A1; Swiss-Prot: sp|F4HZB2|BCHA1_ARATH Protein SPIRRIG; TrEMBL-Plants: tr|I1JF68|I1JF68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0173300 LjG1.1_chr5 44284879 44304085 +
2 domain predictions
 –
LotjaGi5g1v0173300.2
n.a. WD repeat and FYVE domain-containing protein 3; TAIR: AT1G03060.1 BEACH-DOMAIN HOMOLOG A1; Swiss-Prot: sp|F4HZB2|BCHA1_ARATH Protein SPIRRIG; TrEMBL-Plants: tr|I1JF68|I1JF68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0173300 LjG1.1_chr5 44286672 44302998 +
2 domain predictions
 –
LotjaGi5g1v0173300.3
n.a. WD repeat and FYVE domain-containing protein 3; TAIR: AT1G03060.1 BEACH-DOMAIN HOMOLOG A1; Swiss-Prot: sp|F4HZB2|BCHA1_ARATH Protein SPIRRIG; TrEMBL-Plants: tr|I1JF68|I1JF68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0173300 LjG1.1_chr5 44286674 44302998 +
2 domain predictions
 –
LotjaGi5g1v0173300.4
n.a. WD repeat and FYVE domain-containing protein 3; TAIR: AT1G03060.1 BEACH-DOMAIN HOMOLOG A1; Swiss-Prot: sp|F4HZB2|BCHA1_ARATH Protein SPIRRIG; TrEMBL-Plants: tr|I1JF68|I1JF68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0173300 LjG1.1_chr5 44286675 44302998 +
2 domain predictions
 –
LotjaGi5g1v0173300.5
n.a. WD repeat and FYVE domain-containing protein 3; TAIR: AT1G03060.1 BEACH-DOMAIN HOMOLOG A1; Swiss-Prot: sp|F4HZB2|BCHA1_ARATH Protein SPIRRIG; TrEMBL-Plants: tr|I1JF68|I1JF68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0173300 LjG1.1_chr5 44286675 44302998 +
2 domain predictions
 –
LotjaGi5g1v0173300.6
n.a. WD repeat and FYVE domain-containing protein 3; TAIR: AT1G03060.1 BEACH-DOMAIN HOMOLOG A1; Swiss-Prot: sp|F4HZB2|BCHA1_ARATH Protein SPIRRIG; TrEMBL-Plants: tr|G7ICR2|G7ICR2_MEDTR Beige/BEACH and WD40 domain protein; Found in the gene: LotjaGi5g1v0173300 LjG1.1_chr5 44291843 44302998 +
2 domain predictions
 –
LotjaGi5g1v0257800.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q41160|LCB3_ROBPS Putative bark agglutinin LECRPA3; TrEMBL-Plants: tr|I3SL71|I3SL71_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0257800 LjG1.1_chr5 56646812 56649422 +
2 domain predictions
 –
LotjaGi5g1v0257900.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q41160|LCB3_ROBPS Putative bark agglutinin LECRPA3; TrEMBL-Plants: tr|I3SK58|I3SK58_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0257900 LjG1.1_chr5 56652168 56653170 +
2 domain predictions
 –
LotjaGi5g1v0266100.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|P19664|LEC_LOTTE Anti-H(O) lectin; TrEMBL-Plants: tr|D0VWW1|D0VWW1_LOTTE Lectin; Found in the gene: LotjaGi5g1v0266100 LjG1.1_chr5 57781869 57783520 +
2 domain predictions
 –
LotjaGi5g1v0282200_LC.1
n.a. Lectin protein kinase family protein; TAIR: AT5G42120.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9FHX3|LRKS6_ARATH L-type lectin-domain containing receptor kinase S.6; TrEMBL-Plants: tr|I1LDI3|I1LDI3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0282200_LC LjG1.1_chr5 59850015 59851270 +
2 domain predictions
 –
LotjaGi5g1v0293600_LC.1
n.a. Lectin protein kinase family protein; TAIR: AT5G42120.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9FHX3|LRKS6_ARATH L-type lectin-domain containing receptor kinase S.6; TrEMBL-Plants: tr|G7ID26|G7ID26_MEDTR Lectin receptor kinase; Found in the gene: LotjaGi5g1v0293600_LC LjG1.1_chr5 61107976 61108436 +
2 domain predictions
 –
LotjaGi5g1v0317700.1
n.a. Xyloglucan endotransglucosylase/hydrolase; TAIR: AT1G11545.1 xyloglucan endotransglucosylase/hydrolase 8; Swiss-Prot: sp|Q8L9A9|XTH8_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 8; TrEMBL-Plants: tr|I3SJZ6|I3SJZ6_LOTJA Xyloglucan endotransglucosylase/hydrolase; Found in the gene: LotjaGi5g1v0317700 LjG1.1_chr5 63544924 63547729 +
2 domain predictions
 –
LotjaGi5g1v0317700.2
n.a. Xyloglucan endotransglucosylase/hydrolase; TAIR: AT1G11545.1 xyloglucan endotransglucosylase/hydrolase 8; Swiss-Prot: sp|Q8L9A9|XTH8_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 8; TrEMBL-Plants: tr|I3SJZ6|I3SJZ6_LOTJA Xyloglucan endotransglucosylase/hydrolase; Found in the gene: LotjaGi5g1v0317700 LjG1.1_chr5 63546823 63547146 +
2 domain predictions
 –
LotjaGi5g1v0319200.1
n.a. Xyloglucan endotransglucosylase/hydrolase; TAIR: AT2G14620.1 xyloglucan endotransglucosylase/hydrolase 10; Swiss-Prot: sp|Q9ZVK1|XTH10_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 10; TrEMBL-Plants: tr|I3SGA1|I3SGA1_LOTJA Xyloglucan endotransglucosylase/hydrolase; Found in the gene: LotjaGi5g1v0319200 LjG1.1_chr5 63665240 63667287 +
2 domain predictions
 –
LotjaGi6g1v0052800.1
n.a. Receptor-like kinase; TAIR: AT3G53380.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LFH9|LRK81_ARATH L-type lectin-domain containing receptor kinase VIII.1; TrEMBL-Plants: tr|A0A0S3S5S3|A0A0S3S5S3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0052800 LjG1.1_chr6 9428809 9431404 -
2 domain predictions
 –
LotjaGi6g1v0068900.1
n.a. Lectin protein kinase family protein; TAIR: AT5G01090.1 Concanavalin A-like lectin family protein; Swiss-Prot: sp|Q9FHG4|LRKS7_ARATH Probable L-type lectin-domain containing receptor kinase S.7; TrEMBL-Plants: tr|I3T9B8|I3T9B8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0068900 LjG1.1_chr6 13221021 13223369 +
2 domain predictions
 –
LotjaGi6g1v0142300.1
n.a. Receptor-like kinase; TAIR: AT5G55830.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9FHG4|LRKS7_ARATH Probable L-type lectin-domain containing receptor kinase S.7; TrEMBL-Plants: tr|A0A072UWU3|A0A072UWU3_MEDTR Lectin receptor kinase; Found in the gene: LotjaGi6g1v0142300 LjG1.1_chr6 41022933 41025293 -
2 domain predictions
 –
LotjaGi6g1v0169600.1
n.a. Xyloglucan endotransglucosylase/hydrolase; TAIR: AT3G23730.1 xyloglucan endotransglucosylase/hydrolase 16; Swiss-Prot: sp|Q8LG58|XTH16_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 16; TrEMBL-Plants: tr|A0A151RYN6|A0A151RYN6_CAJCA Xyloglucan endotransglucosylase/hydrolase; Found in the gene: LotjaGi6g1v0169600 LjG1.1_chr6 45506836 45509186 -
2 domain predictions
 –
LotjaGi6g1v0232500.1
n.a. Xyloglucan endotransglucosylase/hydrolase; TAIR: AT4G25810.1 xyloglucan endotransglycosylase 6; Swiss-Prot: sp|Q38910|XTH23_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 23; TrEMBL-Plants: tr|A0A151QUG5|A0A151QUG5_CAJCA Xyloglucan endotransglucosylase/hydrolase; Found in the gene: LotjaGi6g1v0232500 LjG1.1_chr6 54154839 54161571 -
2 domain predictions
 –
LotjaGi6g1v0232500.2
n.a. Xyloglucan endotransglucosylase/hydrolase; TAIR: AT4G25810.1 xyloglucan endotransglycosylase 6; Swiss-Prot: sp|Q38910|XTH23_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 23; TrEMBL-Plants: tr|A0A151QUG5|A0A151QUG5_CAJCA Xyloglucan endotransglucosylase/hydrolase; Found in the gene: LotjaGi6g1v0232500 LjG1.1_chr6 54159851 54161169 -
2 domain predictions
 –
LotjaGi6g1v0232500.3
n.a. Xyloglucan endotransglucosylase/hydrolase; TAIR: AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein; Swiss-Prot: sp|Q38857|XTH22_ARATH Xyloglucan endotransglucosylase/hydrolase protein 22; TrEMBL-Plants: tr|A0A151QUG5|A0A151QUG5_CAJCA Xyloglucan endotransglucosylase/hydrolase; Found in the gene: LotjaGi6g1v0232500 LjG1.1_chr6 54159851 54161327 -
2 domain predictions
 –
LotjaGi6g1v0312900.1
n.a. Beta-1,3-galactosyltransferase-like protein; TAIR: AT4G21060.2 Galactosyltransferase family protein; Swiss-Prot: sp|A7XDQ9|B3GTK_ARATH Hydroxyproline O-galactosyltransferase GALT2; TrEMBL-Plants: tr|I1MF03|I1MF03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0312900 LjG1.1_chr6 63098968 63105024 -
2 domain predictions
 –
LotjaGi6g1v0331300.1
n.a. Lectin receptor kinase; TAIR: AT4G04960.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9S9U1|LRK71_ARATH L-type lectin-domain containing receptor kinase VII.1; TrEMBL-Plants: tr|I1M233|I1M233_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0331300 LjG1.1_chr6 64641823 64643883 -
2 domain predictions
 –
LotjaGi6g1v0339000.1
n.a. Heterogeneous nuclear ribonucleoprotein U-like protein 1; TAIR: AT2G22010.1 related to KPC1; Swiss-Prot: sp|Q9BUJ2|HNRL1_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 1; TrEMBL-Plants: tr|I1MEA2|I1MEA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0339000 LjG1.1_chr6 65316996 65320497 +
2 domain predictions
 –