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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR000626
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We have found 247 results. Now displaying 4 of 5 with 50 rows per page. This search has taken 5.575s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0148400 LjG1.1_chr3 19965478 19967151 -
n.a. Ubiquitin; TAIR: AT2G47110.1 ubiquitin 6; Swiss-Prot: sp|P47905|RS27A_LUPAL Ubiquitin-40S ribosomal protein S27a; TrEMBL-Plants: tr|A0A059AWX7|A0A059AWX7_EUCGR Uncharacterized protein; Found in the gene: LotjaGi3g1v0154500_LC LjG1.1_chr3 20977856 20978344 +
n.a. Ubiquitin; TAIR: AT2G47110.1 ubiquitin 6; Swiss-Prot: sp|P47905|RS27A_LUPAL Ubiquitin-40S ribosomal protein S27a; TrEMBL-Plants: tr|A0A059AWX7|A0A059AWX7_EUCGR Uncharacterized protein; Found in the gene: LotjaGi3g1v0154500_LC LjG1.1_chr3 20977880 20978344 +
n.a. Ubiquitin; TAIR: AT2G47110.1 ubiquitin 6; Swiss-Prot: sp|P47905|RS27A_LUPAL Ubiquitin-40S ribosomal protein S27a; TrEMBL-Plants: tr|A0A059AWX7|A0A059AWX7_EUCGR Uncharacterized protein; Found in the gene: LotjaGi3g1v0154500_LC LjG1.1_chr3 20977880 20978361 +
n.a. Polyubiquitin; TAIR: AT2G32350.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|P0CG70|UBI4P_NEUCR Polyubiquitin; TrEMBL-Plants: tr|I1M427|I1M427_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0191000 LjG1.1_chr3 27651132 27653001 -
n.a. BAG family molecular chaperone regulator; TAIR: AT3G51780.1 BCL-2-associated athanogene 4; Swiss-Prot: sp|Q8RX71|BAG4_ARATH BAG family molecular chaperone regulator 4; TrEMBL-Plants: tr|A0A0L9VSI6|A0A0L9VSI6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0196400 LjG1.1_chr3 28594463 28602893 +
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|A0A072UMK2|A0A072UMK2_MEDTR Polyubiquitin 3; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395092 41398152 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395940 41397840 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A0P0X005|A0A0P0X005_ORYSJ protein; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395092 41398152 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395527 41397995 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395892 41397541 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395933 41397553 -
n.a. Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A194YL57|A0A194YL57_SORBI Uncharacterized protein; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395933 41397839 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A068UJB0|A0A068UJB0_COFCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395940 41397085 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395940 41397593 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi3g1v0249200 LjG1.1_chr3 41395940 41397839 -
n.a. Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 LjG1.1_chr3 71484823 71487277 +
n.a. Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 LjG1.1_chr3 71485240 71486456 +
n.a. Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 LjG1.1_chr3 71485241 71486496 +
n.a. Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 LjG1.1_chr3 71485530 71486456 +
n.a. Polyubiquitin; TAIR: AT4G02890.3 Ubiquitin family protein; Swiss-Prot: sp|P0CG84|UBI4P_NICSY Polyubiquitin; TrEMBL-Plants: tr|P93501|P93501_PHAVU Ubiquitin-like protein; Found in the gene: LotjaGi3g1v0340100 LjG1.1_chr3 71485539 71486496 +
n.a. Phosphatidylinositol 4-kinase gamma 4; TAIR: AT2G46500.1 phosphoinositide 4-kinase gamma 4; Swiss-Prot: sp|Q9ZPY9|P4KG4_ARATH Phosphatidylinositol 4-kinase gamma 4; TrEMBL-Plants: tr|I1MKI4|I1MKI4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0396100 LjG1.1_chr3 79640408 79644101 +
n.a. Phosphatidylinositol 4-kinase gamma 4; TAIR: AT2G46500.1 phosphoinositide 4-kinase gamma 4; Swiss-Prot: sp|Q9ZPY9|P4KG4_ARATH Phosphatidylinositol 4-kinase gamma 4; TrEMBL-Plants: tr|I1MKI4|I1MKI4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0396100 LjG1.1_chr3 79641127 79642771 +
n.a. SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|A0A0S3SM17|A0A0S3SM17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0421600 LjG1.1_chr3 82994282 82998684 -
n.a. SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|A0A0S3SM17|A0A0S3SM17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0421600 LjG1.1_chr3 82994713 82998646 -
n.a. SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|A0A0S3SM17|A0A0S3SM17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0421600 LjG1.1_chr3 82995790 82998345 -
n.a. SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; TAIR: AT1G14650.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein; Swiss-Prot: sp|Q8RXF1|SF3A1_ARATH Probable splicing factor 3A subunit 1; TrEMBL-Plants: tr|A0A0S3SM17|A0A0S3SM17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0421600 LjG1.1_chr3 82995790 82998556 -
n.a. Ubiquitin carboxyl-terminal hydrolase; TAIR: AT3G21280.1 ubiquitin carboxyl-terminal hydrolase; Swiss-Prot: sp|Q84WC6|UBP7_ARATH Ubiquitin carboxyl-terminal hydrolase 7; TrEMBL-Plants: tr|A0A0L9TA17|A0A0L9TA17_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0427700 LjG1.1_chr3 83880881 83891390 -
n.a. Pre-mRNA splicing factor-like protein; TAIR: AT4G03430.1 pre-mRNA splicing factor-like protein; Swiss-Prot: sp|Q9ZT71|STA1_ARATH Protein STABILIZED1; TrEMBL-Plants: tr|V7BV27|V7BV27_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0443200 LjG1.1_chr3 85656100 85659985 -
n.a. U11/U12 small nuclear ribonucleoprotein 25 kDa-like protein; TAIR: AT3G07860.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|I3SEG9|I3SEG9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0526300 LjG1.1_chr3 94275667 94294472 -
n.a. E3 ubiquitin-protein ligase-like protein; TAIR: AT4G12570.1 ubiquitin protein ligase 5; Swiss-Prot: sp|Q9SU29|UPL5_ARATH E3 ubiquitin-protein ligase UPL5; TrEMBL-Plants: tr|K7MJB8|K7MJB8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0008500 LjG1.1_chr4 1164205 1170921 +
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7171744 7185410 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7178326 7184457 -
n.a. Polyubiquitin; TAIR: AT4G02890.1 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|Q41754|Q41754_MAIZE Polyubiquitin containing 7 ubiquitin monomers; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7182598 7185410 -
n.a. Polyubiquitin; TAIR: AT4G05320.1 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|K3YR52|K3YR52_SETIT Uncharacterized protein; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7183064 7184220 -
n.a. Polyubiquitin; TAIR: AT4G02890.1 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|D7M3C0|D7M3C0_ARALL Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7183075 7184291 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|K7UBK6|K7UBK6_MAIZE Ubiquitin2; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7183075 7184473 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7183075 7184635 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7183075 7184659 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7183075 7184747 -
n.a. Polyubiquitin protein; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7171835 7185278 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7171836 7184747 -
n.a. Polyubiquitin; TAIR: AT4G02890.1 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A0V0HI41|A0A0V0HI41_SOLCH Putative ovule protein; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7171881 7172946 -
n.a. Polyubiquitin; TAIR: AT4G02890.1 Ubiquitin family protein; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|A0A0V0HI41|A0A0V0HI41_SOLCH Putative ovule protein; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7171881 7173095 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|A0A072UMK2|A0A072UMK2_MEDTR Polyubiquitin 3; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7171881 7184448 -
n.a. Polyubiquitin protein; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|K7UBK6|K7UBK6_MAIZE Ubiquitin2; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7171881 7184457 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|M7Z4Q9|M7Z4Q9_TRIUA Polyubiquitin-A; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7171881 7184635 -
n.a. Polyubiquitin; TAIR: AT4G05320.2 polyubiquitin 10; Swiss-Prot: sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A; TrEMBL-Plants: tr|A0A072UMK2|A0A072UMK2_MEDTR Polyubiquitin 3; Found in the gene: LotjaGi4g1v0059800 LjG1.1_chr4 7171881 7184659 -
n.a. Polyubiquitin; TAIR: AT1G65350.1 ubiquitin 13; Swiss-Prot: sp|P69315|UBIQP_LINUS Polyubiquitin; TrEMBL-Plants: tr|I3S9X0|I3S9X0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0112500_LC LjG1.1_chr4 16084634 16086050 -
n.a. Polyubiquitin; TAIR: AT1G65350.1 ubiquitin 13; Swiss-Prot: sp|P0CG85|UBI1P_NICSY Polyubiquitin; TrEMBL-Plants: tr|I3S9X0|I3S9X0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0112500_LC LjG1.1_chr4 16085185 16106802 -