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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002939
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 72 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 6.597s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0063600.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2; TrEMBL-Plants: tr|I1JMV0|I1JMV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0063600 LjG1.1_chr3 6734512 6739877 -
2 domain predictions
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LotjaGi3g1v0063600.2
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2; TrEMBL-Plants: tr|I1KJN5|I1KJN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0063600 LjG1.1_chr3 6735850 6738702 -
2 domain predictions
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LotjaGi3g1v0063600.3
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2; TrEMBL-Plants: tr|I1JMV0|I1JMV0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0063600 LjG1.1_chr3 6735850 6738702 -
2 domain predictions
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LotjaGi3g1v0124500.1
n.a. Chaperone protein DNAj, putative; TAIR: AT5G48030.1 gametophytic factor 2; Swiss-Prot: sp|Q8GWW8|GFA2_ARATH Chaperone protein dnaJ GFA2, mitochondrial; TrEMBL-Plants: tr|A0A0L9UJX2|A0A0L9UJX2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0124500 LjG1.1_chr3 15238653 15250909 -
2 domain predictions
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LotjaGi3g1v0184100.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1; TrEMBL-Plants: tr|A0A0D2PQJ2|A0A0D2PQJ2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0184100 LjG1.1_chr3 25790039 25793534 +
2 domain predictions
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LotjaGi3g1v0184100.2
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1; TrEMBL-Plants: tr|A0A0D2PQJ2|A0A0D2PQJ2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0184100 LjG1.1_chr3 25790307 25792333 +
2 domain predictions
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LotjaGi3g1v0184100.3
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1; TrEMBL-Plants: tr|A0A0D2VJQ1|A0A0D2VJQ1_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0184100 LjG1.1_chr3 25790307 25792333 +
2 domain predictions
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LotjaGi3g1v0208600.1
n.a. Chaperone protein dnaJ; TAIR: AT5G01390.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|V7AJV6|V7AJV6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0208600 LjG1.1_chr3 30794253 30798576 -
2 domain predictions
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LotjaGi3g1v0241900.1
n.a. Chaperone protein dnaJ; TAIR: AT2G20560.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4; TrEMBL-Plants: tr|B7FHS3|B7FHS3_MEDTR DnaJ heat shock family protein; Found in the gene: LotjaGi3g1v0241900 LjG1.1_chr3 39293280 39297868 +
2 domain predictions
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LotjaGi3g1v0241900.2
n.a. Chaperone protein dnaJ; TAIR: AT2G20560.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4; TrEMBL-Plants: tr|B7FHS3|B7FHS3_MEDTR DnaJ heat shock family protein; Found in the gene: LotjaGi3g1v0241900 LjG1.1_chr3 39294511 39297443 +
2 domain predictions
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LotjaGi3g1v0447700.1
n.a. Chaperone protein dnaJ; TAIR: AT2G20560.1 DNAJ heat shock family protein; Swiss-Prot: sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5; TrEMBL-Plants: tr|C6T8E0|C6T8E0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0447700 LjG1.1_chr3 86098960 86103067 +
2 domain predictions
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LotjaGi3g1v0470700.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|Q04960|DNJH_CUCSA DnaJ protein homolog; TrEMBL-Plants: tr|A0A0D2PQJ2|A0A0D2PQJ2_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0470700 LjG1.1_chr3 88617839 88621131 -
2 domain predictions
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LotjaGi3g1v0470700.2
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|Q04960|DNJH_CUCSA DnaJ protein homolog; TrEMBL-Plants: tr|A0A151R8Y4|A0A151R8Y4_CAJCA DnaJ protein isogeny ANJ1; Found in the gene: LotjaGi3g1v0470700 LjG1.1_chr3 88618504 88620837 -
2 domain predictions
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LotjaGi3g1v0470700.3
n.a. Chaperone protein dnaJ, putative; TAIR: AT5G22060.1 DNAJ homologue 2; Swiss-Prot: sp|Q04960|DNJH_CUCSA DnaJ protein homolog; TrEMBL-Plants: tr|A0A151R8Y4|A0A151R8Y4_CAJCA DnaJ protein isogeny ANJ1; Found in the gene: LotjaGi3g1v0470700 LjG1.1_chr3 88618504 88620837 -
2 domain predictions
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LotjaGi4g1v0161400.1
n.a. Chaperone protein dnaJ, putative; TAIR: AT1G59725.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1; TrEMBL-Plants: tr|V7C6U9|V7C6U9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0161400 LjG1.1_chr4 29317228 29319277 +
2 domain predictions
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LotjaGi6g1v0070500.1
n.a. Chaperone protein dnaJ; TAIR: AT5G25530.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q9D832|DNJB4_MOUSE DnaJ homolog subfamily B member 4; TrEMBL-Plants: tr|I1KXP3|I1KXP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0070500 LjG1.1_chr6 13433922 13435948 -
2 domain predictions
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LotjaGi6g1v0093400.1
n.a. Chaperone protein dnaJ; TAIR: AT2G22360.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q9SJZ7|DNJA6_ARATH Chaperone protein dnaJ A6, chloroplastic; TrEMBL-Plants: tr|A0A151S382|A0A151S382_CAJCA Chaperone protein dnaJ; Found in the gene: LotjaGi6g1v0093400 LjG1.1_chr6 20109535 20117410 -
2 domain predictions
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LotjaGi6g1v0328300_LC.1
n.a. DnaJ protein; TAIR: AT3G08910.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|A2Q505|A2Q505_MEDTR DnaJ heat shock family protein; Found in the gene: LotjaGi6g1v0328300_LC LjG1.1_chr6 64342371 64344047 -
2 domain predictions
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LotjaGi6g1v0328400.1
n.a. Chaperone protein dnaJ; TAIR: AT2G20560.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|A0A067JNB8|A0A067JNB8_JATCU Uncharacterized protein; Found in the gene: LotjaGi6g1v0328400 LjG1.1_chr6 64344910 64347493 -
2 domain predictions
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LotjaGi6g1v0328400.2
n.a. Chaperone protein dnaJ; TAIR: AT2G20560.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|A0A067JNB8|A0A067JNB8_JATCU Uncharacterized protein; Found in the gene: LotjaGi6g1v0328400 LjG1.1_chr6 64345177 64347262 -
2 domain predictions
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LotjaGi6g1v0328400.3
n.a. Chaperone protein dnaJ; TAIR: AT4G28480.2 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|A0A067JNB8|A0A067JNB8_JATCU Uncharacterized protein; Found in the gene: LotjaGi6g1v0328400 LjG1.1_chr6 64345257 64347262 -
2 domain predictions
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LotjaGi6g1v0360800.1
n.a. Chaperone protein dnaJ; TAIR: AT1G11040.1 HSP40/DnaJ peptide-binding protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|K7M9M0|K7M9M0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0360800 LjG1.1_chr6 67270487 67273659 +
2 domain predictions
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