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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004240
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 72 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 5.664s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0283200.7
n.a. Transmembrane 9 superfamily member; TAIR: AT5G35160.2 Endomembrane protein 70 protein family; Swiss-Prot: sp|Q9FYQ8|TMN11_ARATH Transmembrane 9 superfamily member 11; TrEMBL-Plants: tr|A0A151R0K2|A0A151R0K2_CAJCA Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0283200 LjG1.1_chr4 65516842 65519077 +
3 domain predictions
1 GO term
LotjaGi4g1v0288100.1
n.a. Transmembrane 9 superfamily member; TAIR: AT5G10840.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|F4KIB2|TMN8_ARATH Transmembrane 9 superfamily member 8; TrEMBL-Plants: tr|A0A151T065|A0A151T065_CAJCA Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0288100 LjG1.1_chr4 66043334 66051131 +
3 domain predictions
1 GO term
LotjaGi4g1v0288100.2
n.a. Transmembrane 9 superfamily member; TAIR: AT5G10840.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|F4KIB2|TMN8_ARATH Transmembrane 9 superfamily member 8; TrEMBL-Plants: tr|A0A151T065|A0A151T065_CAJCA Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0288100 LjG1.1_chr4 66044157 66047093 +
3 domain predictions
1 GO term
LotjaGi4g1v0353900.1
n.a. Transmembrane 9 superfamily member; TAIR: AT2G01970.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|Q9ZPS7|TMN3_ARATH Transmembrane 9 superfamily member 3; TrEMBL-Plants: tr|I1K3B1|I1K3B1_SOYBN Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0353900 LjG1.1_chr4 73237138 73244288 +
3 domain predictions
1 GO term
LotjaGi4g1v0353900.2
n.a. Transmembrane 9 superfamily member; TAIR: AT2G01970.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|Q9ZPS7|TMN3_ARATH Transmembrane 9 superfamily member 3; TrEMBL-Plants: tr|I1K3B1|I1K3B1_SOYBN Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0353900 LjG1.1_chr4 73237296 73242965 +
3 domain predictions
1 GO term
LotjaGi4g1v0353900.3
n.a. Transmembrane 9 superfamily member; TAIR: AT2G01970.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|Q9ZPS7|TMN3_ARATH Transmembrane 9 superfamily member 3; TrEMBL-Plants: tr|I1K3B1|I1K3B1_SOYBN Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0353900 LjG1.1_chr4 73237326 73242965 +
3 domain predictions
1 GO term
LotjaGi4g1v0388000.1
n.a. Transmembrane 9 superfamily member; TAIR: AT1G10950.1 transmembrane nine 1; Swiss-Prot: sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1; TrEMBL-Plants: tr|I1K499|I1K499_SOYBN Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0388000 LjG1.1_chr4 76634338 76641834 -
3 domain predictions
1 GO term
LotjaGi4g1v0388000.2
n.a. Transmembrane 9 superfamily member; TAIR: AT1G10950.1 transmembrane nine 1; Swiss-Prot: sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1; TrEMBL-Plants: tr|G7L8U5|G7L8U5_MEDTR Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0388000 LjG1.1_chr4 76635396 76640175 -
3 domain predictions
1 GO term
LotjaGi4g1v0388000.3
n.a. Transmembrane 9 superfamily member; TAIR: AT1G10950.1 transmembrane nine 1; Swiss-Prot: sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1; TrEMBL-Plants: tr|I1K499|I1K499_SOYBN Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0388000 LjG1.1_chr4 76635396 76640285 -
3 domain predictions
1 GO term
LotjaGi4g1v0388000.4
n.a. Transmembrane 9 superfamily member; TAIR: AT1G10950.1 transmembrane nine 1; Swiss-Prot: sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1; TrEMBL-Plants: tr|I1KSR1|I1KSR1_SOYBN Transmembrane 9 superfamily member; Found in the gene: LotjaGi4g1v0388000 LjG1.1_chr4 76635396 76640343 -
3 domain predictions
1 GO term
LotjaGi5g1v0051500_LC.1
n.a. Transmembrane 9 superfamily member; TAIR: AT5G25100.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|Q9C5N2|TMN9_ARATH Transmembrane 9 superfamily member 9; TrEMBL-Plants: tr|V7CUM1|V7CUM1_PHAVU Transmembrane 9 superfamily member; Found in the gene: LotjaGi5g1v0051500_LC LjG1.1_chr5 8698946 8701100 -
3 domain predictions
1 GO term
LotjaGi6g1v0027000.1
n.a. Transmembrane 9 superfamily member; TAIR: AT4G12650.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|F4JRE0|TMN12_ARATH Transmembrane 9 superfamily member 12; TrEMBL-Plants: tr|G7J833|G7J833_MEDTR Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0027000 LjG1.1_chr6 4764513 4768685 -
3 domain predictions
1 GO term
LotjaGi6g1v0027000.2
n.a. Transmembrane 9 superfamily member; TAIR: AT4G12650.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|F4JRE0|TMN12_ARATH Transmembrane 9 superfamily member 12; TrEMBL-Plants: tr|G7J833|G7J833_MEDTR Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0027000 LjG1.1_chr6 4765612 4767719 -
3 domain predictions
1 GO term
LotjaGi6g1v0179600_LC.1
n.a. Transmembrane 9 superfamily member; TAIR: AT5G25100.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|Q9C5N2|TMN9_ARATH Transmembrane 9 superfamily member 9; TrEMBL-Plants: tr|V7CUM1|V7CUM1_PHAVU Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0179600_LC LjG1.1_chr6 47140816 47143283 -
3 domain predictions
1 GO term
LotjaGi6g1v0203000.1
n.a. Transmembrane 9 superfamily member; TAIR: AT2G24170.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|Q8RWW1|TMN10_ARATH Transmembrane 9 superfamily member 10; TrEMBL-Plants: tr|A0A151T065|A0A151T065_CAJCA Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0203000 LjG1.1_chr6 50041098 50044680 -
3 domain predictions
1 GO term
LotjaGi6g1v0203000.2
n.a. Transmembrane 9 superfamily member; TAIR: AT2G24170.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|Q8RWW1|TMN10_ARATH Transmembrane 9 superfamily member 10; TrEMBL-Plants: tr|A0A151T065|A0A151T065_CAJCA Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0203000 LjG1.1_chr6 50041573 50043868 -
3 domain predictions
1 GO term
LotjaGi6g1v0203000.3
n.a. Transmembrane 9 superfamily member; TAIR: AT2G24170.1 Endomembrane protein 70 protein family; Swiss-Prot: sp|Q8RWW1|TMN10_ARATH Transmembrane 9 superfamily member 10; TrEMBL-Plants: tr|A0A151T065|A0A151T065_CAJCA Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0203000 LjG1.1_chr6 50041573 50044157 -
3 domain predictions
1 GO term
LotjaGi6g1v0362100.1
n.a. Transmembrane 9 superfamily member; TAIR: AT1G10950.1 transmembrane nine 1; Swiss-Prot: sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1; TrEMBL-Plants: tr|V7BVD4|V7BVD4_PHAVU Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0362100 LjG1.1_chr6 67406892 67412367 +
3 domain predictions
1 GO term
LotjaGi6g1v0362100.2
n.a. Transmembrane 9 superfamily member; TAIR: AT1G10950.1 transmembrane nine 1; Swiss-Prot: sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1; TrEMBL-Plants: tr|V7BVD4|V7BVD4_PHAVU Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0362100 LjG1.1_chr6 67406897 67412367 +
3 domain predictions
1 GO term
LotjaGi6g1v0362100.3
n.a. Transmembrane 9 superfamily member; TAIR: AT1G10950.1 transmembrane nine 1; Swiss-Prot: sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1; TrEMBL-Plants: tr|V7BVD4|V7BVD4_PHAVU Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0362100 LjG1.1_chr6 67406951 67412367 +
3 domain predictions
1 GO term
LotjaGi6g1v0362100.4
n.a. Transmembrane 9 superfamily member; TAIR: AT1G10950.1 transmembrane nine 1; Swiss-Prot: sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1; TrEMBL-Plants: tr|V7BVD4|V7BVD4_PHAVU Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0362100 LjG1.1_chr6 67407068 67412367 +
3 domain predictions
1 GO term
LotjaGi6g1v0362100.5
n.a. Transmembrane 9 superfamily member; TAIR: AT1G10950.1 transmembrane nine 1; Swiss-Prot: sp|Q940G0|TMN1_ARATH Transmembrane 9 superfamily member 1; TrEMBL-Plants: tr|V7BVD4|V7BVD4_PHAVU Transmembrane 9 superfamily member; Found in the gene: LotjaGi6g1v0362100 LjG1.1_chr6 67407078 67412367 +
3 domain predictions
1 GO term