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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029047
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We have found 189 results. Now displaying 4 of 4 with 50 rows per page. This search has taken 6.469s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0455800.2
n.a. Heat shock 70 kDa protein; TAIR: AT2G32120.1 heat-shock protein 70T-2; Swiss-Prot: sp|Q9SKY8|HSP7H_ARATH Heat shock 70 kDa protein 8; TrEMBL-Plants: tr|I1JAU2|I1JAU2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0455800 LjG1.1_chr2 94892424 94894145 -
3 domain predictions
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LotjaGi3g1v0016300.1
n.a. Heat shock 70 kDa protein; TAIR: AT1G79930.1 heat shock protein 91; Swiss-Prot: sp|Q9S7C0|HSP7O_ARATH Heat shock 70 kDa protein 14; TrEMBL-Plants: tr|I1MCN3|I1MCN3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0016300 LjG1.1_chr3 1700748 1707179 -
3 domain predictions
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LotjaGi3g1v0016300.2
n.a. Heat shock 70 kDa protein; TAIR: AT1G79930.1 heat shock protein 91; Swiss-Prot: sp|Q9S7C0|HSP7O_ARATH Heat shock 70 kDa protein 14; TrEMBL-Plants: tr|I1MCN3|I1MCN3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0016300 LjG1.1_chr3 1702051 1706362 -
3 domain predictions
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LotjaGi3g1v0347100.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|W9QV79|W9QV79_9ROSA Heat shock 70 kDa protein; Found in the gene: LotjaGi3g1v0347100 LjG1.1_chr3 72470017 72472729 -
3 domain predictions
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LotjaGi3g1v0347100.2
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c; TrEMBL-Plants: tr|W9QV79|W9QV79_9ROSA Heat shock 70 kDa protein; Found in the gene: LotjaGi3g1v0347100 LjG1.1_chr3 72470133 72472251 -
3 domain predictions
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LotjaGi3g1v0347100.3
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c; TrEMBL-Plants: tr|W9QV79|W9QV79_9ROSA Heat shock 70 kDa protein; Found in the gene: LotjaGi3g1v0347100 LjG1.1_chr3 72470133 72472251 -
3 domain predictions
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LotjaGi3g1v0347100.5
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|W9QV79|W9QV79_9ROSA Heat shock 70 kDa protein; Found in the gene: LotjaGi3g1v0347100 LjG1.1_chr3 72470284 72472260 -
3 domain predictions
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LotjaGi3g1v0362500.1
n.a. Heat shock 70 kDa protein; TAIR: AT1G79930.1 heat shock protein 91; Swiss-Prot: sp|F4HQD4|HSP7P_ARATH Heat shock 70 kDa protein 15; TrEMBL-Plants: tr|I1KG78|I1KG78_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0362500 LjG1.1_chr3 74629691 74636839 -
3 domain predictions
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LotjaGi3g1v0456400.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c; TrEMBL-Plants: tr|A0A151S7N6|A0A151S7N6_CAJCA Heat shock cognate 70 kDa protein 2; Found in the gene: LotjaGi3g1v0456400 LjG1.1_chr3 86983962 86987422 +
3 domain predictions
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LotjaGi3g1v0456700.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c; TrEMBL-Plants: tr|A0A151S7S0|A0A151S7S0_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi3g1v0456700 LjG1.1_chr3 87022148 87029242 +
3 domain predictions
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LotjaGi3g1v0456700.2
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c; TrEMBL-Plants: tr|A0A151S7S0|A0A151S7S0_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi3g1v0456700 LjG1.1_chr3 87027761 87029242 +
3 domain predictions
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LotjaGi4g1v0041900.1
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|A0A0S3QZX4|A0A0S3QZX4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0041900 LjG1.1_chr4 4943962 4949103 +
3 domain predictions
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LotjaGi4g1v0041900.2
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|V7BTF5|V7BTF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0041900 LjG1.1_chr4 4944536 4947196 +
3 domain predictions
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LotjaGi4g1v0041900.3
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|V7BTF5|V7BTF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0041900 LjG1.1_chr4 4944589 4947196 +
3 domain predictions
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LotjaGi4g1v0041900.4
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|V7BTF5|V7BTF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0041900 LjG1.1_chr4 4944591 4947196 +
3 domain predictions
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LotjaGi4g1v0041900.5
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|V7BTF5|V7BTF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0041900 LjG1.1_chr4 4944732 4947196 +
3 domain predictions
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LotjaGi4g1v0289500.1
n.a. Heat shock 70 kDa protein; TAIR: AT1G16030.1 heat shock protein 70B; Swiss-Prot: sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein; TrEMBL-Plants: tr|I1MT10|I1MT10_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0289500 LjG1.1_chr4 66196332 66199028 +
3 domain predictions
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LotjaGi4g1v0289500.2
n.a. Heat shock 70 kDa protein; TAIR: AT1G16030.1 heat shock protein 70B; Swiss-Prot: sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein; TrEMBL-Plants: tr|I1MT10|I1MT10_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0289500 LjG1.1_chr4 66196638 66198602 +
3 domain predictions
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LotjaGi4g1v0437900.1
n.a. Heat shock 70 kDa protein; TAIR: AT5G42020.1 Heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|Q03685|BIP5_TOBAC Luminal-binding protein 5; TrEMBL-Plants: tr|A0A0A0KKD9|A0A0A0KKD9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi4g1v0437900 LjG1.1_chr4 81104931 81108899 +
3 domain predictions
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LotjaGi4g1v0437900.2
n.a. Heat shock 70 kDa protein; TAIR: AT5G42020.1 Heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|Q03684|BIP4_TOBAC Luminal-binding protein 4; TrEMBL-Plants: tr|A0A0B2Q5A6|A0A0B2Q5A6_GLYSO Luminal-binding protein 5; Found in the gene: LotjaGi4g1v0437900 LjG1.1_chr4 81105450 81108254 +
3 domain predictions
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LotjaGi4g1v0437900.3
n.a. Heat shock 70 kDa protein; TAIR: AT5G42020.1 Heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|Q03684|BIP4_TOBAC Luminal-binding protein 4; TrEMBL-Plants: tr|A0A0B2Q5A6|A0A0B2Q5A6_GLYSO Luminal-binding protein 5; Found in the gene: LotjaGi4g1v0437900 LjG1.1_chr4 81105465 81108254 +
3 domain predictions
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LotjaGi4g1v0437900.4
n.a. Heat shock 70 kDa protein; TAIR: AT5G42020.2 Heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|Q03684|BIP4_TOBAC Luminal-binding protein 4; TrEMBL-Plants: tr|F4K007|F4K007_ARATH Luminal-binding protein 2; Found in the gene: LotjaGi4g1v0437900 LjG1.1_chr4 81105471 81108254 +
3 domain predictions
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LotjaGi4g1v0437900.5
n.a. Heat shock 70 kDa protein; TAIR: AT5G42020.1 Heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|Q03684|BIP4_TOBAC Luminal-binding protein 4; TrEMBL-Plants: tr|A0A0B2Q5A6|A0A0B2Q5A6_GLYSO Luminal-binding protein 5; Found in the gene: LotjaGi4g1v0437900 LjG1.1_chr4 81105493 81108254 +
3 domain predictions
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LotjaGi5g1v0121600.1
n.a. 70 kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e; TrEMBL-Plants: tr|A0A151U4E0|A0A151U4E0_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi5g1v0121600 LjG1.1_chr5 25470061 25473293 -
3 domain predictions
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LotjaGi5g1v0121600.2
n.a. 70 kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e; TrEMBL-Plants: tr|A0A0B2SQK8|A0A0B2SQK8_GLYSO Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi5g1v0121600 LjG1.1_chr5 25470347 25472107 -
3 domain predictions
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LotjaGi5g1v0121600.4
n.a. 70 kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e; TrEMBL-Plants: tr|A0A0B2SQK8|A0A0B2SQK8_GLYSO Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi5g1v0121600 LjG1.1_chr5 25470347 25473049 -
3 domain predictions
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LotjaGi5g1v0121600.5
n.a. 70 kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e; TrEMBL-Plants: tr|A0A151U4E0|A0A151U4E0_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi5g1v0121600 LjG1.1_chr5 25470347 25473058 -
3 domain predictions
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LotjaGi6g1v0035100.2
n.a. Heat shock 70 kDa protein; TAIR: AT4G16660.1 heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|F4JMJ1|HSP7R_ARATH Heat shock 70 kDa protein 17; TrEMBL-Plants: tr|A0A072UZC8|A0A072UZC8_MEDTR Heat shock 70 kDa protein; Found in the gene: LotjaGi6g1v0035100 LjG1.1_chr6 6600252 6614853 +
2 domain predictions
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LotjaGi6g1v0167400.1
n.a. Heat shock 70 kDa protein; TAIR: AT1G11660.1 heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|Q9SAB1|HSP7Q_ARATH Heat shock 70 kDa protein 16; TrEMBL-Plants: tr|A0A0B2SLS5|A0A0B2SLS5_GLYSO Heat shock 70 kDa protein 16; Found in the gene: LotjaGi6g1v0167400 LjG1.1_chr6 45192311 45200259 +
3 domain predictions
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LotjaGi6g1v0316300_LC.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein; TrEMBL-Plants: tr|G7ILM0|G7ILM0_MEDTR Heat shock 70 kDa protein; Found in the gene: LotjaGi6g1v0316300_LC LjG1.1_chr6 63414197 63415895 -
3 domain predictions
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LotjaGi6g1v0316600.1
n.a. Heat shock 70 kDa protein; TAIR: AT1G16030.1 heat shock protein 70B; Swiss-Prot: sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein; TrEMBL-Plants: tr|A0A0B2PH98|A0A0B2PH98_GLYSO Heat shock 70 kDa protein; Found in the gene: LotjaGi6g1v0316600 LjG1.1_chr6 63444362 63447898 +
3 domain predictions
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LotjaGi6g1v0347600.1
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|I1M2K9|I1M2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347600 LjG1.1_chr6 66035839 66039879 -
3 domain predictions
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LotjaGi6g1v0347600.2
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|I1M2K9|I1M2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347600 LjG1.1_chr6 66036618 66039196 -
3 domain predictions
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LotjaGi6g1v0347600.3
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|I1M2K9|I1M2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347600 LjG1.1_chr6 66036625 66039187 -
3 domain predictions
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LotjaGi6g1v0347600.4
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|I1M2K9|I1M2K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347600 LjG1.1_chr6 66036625 66039187 -
3 domain predictions
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LotjaGi6g1v0347600.5
n.a. Chaperone DnaK; TAIR: AT5G09590.1 mitochondrial HSO70 2; Swiss-Prot: sp|Q01899|HSP7M_PHAVU Heat shock 70 kDa protein, mitochondrial; TrEMBL-Plants: tr|I1KQV7|I1KQV7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347600 LjG1.1_chr6 66036625 66039187 -
3 domain predictions
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LotjaGi6g1v0364700.1
n.a. Chaperone DnaK; TAIR: AT5G49910.1 chloroplast heat shock protein 70-2; Swiss-Prot: sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, chloroplastic; TrEMBL-Plants: tr|I1MJU7|I1MJU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0364700 LjG1.1_chr6 67672976 67675475 -
3 domain predictions
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LotjaGi6g1v0364700.2
n.a. Chaperone DnaK; TAIR: AT5G49910.1 chloroplast heat shock protein 70-2; Swiss-Prot: sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, chloroplastic; TrEMBL-Plants: tr|I1MJU7|I1MJU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0364700 LjG1.1_chr6 67672976 67675895 -
3 domain predictions
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LotjaGi6g1v0364700.3
n.a. Chaperone DnaK; TAIR: AT5G49910.1 chloroplast heat shock protein 70-2; Swiss-Prot: sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, chloroplastic; TrEMBL-Plants: tr|I1MJU7|I1MJU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0364700 LjG1.1_chr6 67672976 67675930 -
3 domain predictions
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