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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001374
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We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.196s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. Zinc finger CCCH-type with G patch domain-containing protein [Medicago truncatula] gi|357478467|ref|XP_003609519.1| chr0 171099644 171103374 -
n.a. Zinc finger CCCH-type with G patch domain-containing protein [Medicago truncatula] gi|357478467|ref|XP_003609519.1| chr0 171099644 171106480 -
n.a. R3H domain-containing protein [Medicago truncatula] gi|357509253|ref|XP_003624915.1| chr1 48391294 48395643 +
n.a. PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Glycine max] gi|356499332|ref|XP_003518495.1| chr2 39543183 39552511 +
n.a. F15K9.15 protein isoform 2 [Theobroma cacao] gi|508702921|gb|EOX94817.1| chr5 14769207 14772564 +
n.a. Os01g0100600 [Oryza sativa Japonica Group] gi|115433958|ref|NP_001041737.1| chr5 20262499 20266080 +
n.a. PREDICTED: R3H domain-containing protein 2-like [Cicer arietinum] gi|502118292|ref|XP_004496195.1| chr5 25266731 25271624 +
n.a. ATP-dependent RNA helicase, putative; TAIR: AT2G30800.1 helicase in vascular tissue and tapetum; Swiss-Prot: sp|F4INY4|HVT1_ARATH DExH-box ATP-dependent RNA helicase DExH6; TrEMBL-Plants: tr|K7KB99|K7KB99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0046400 LjG1.1_chr1 6332736 6341824 -
n.a. R3h domain containing protein, putative; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp|A0JNC2|R3HD2_BOVIN R3H domain-containing protein 2; TrEMBL-Plants: tr|V7CXD9|V7CXD9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0658800 LjG1.1_chr1 121950331 121955326 +
n.a. Zinc finger family protein / D111/G-patch domain-containing protein; TAIR: AT3G09850.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q9UTK6|YKR3_SCHPO G-patch domain-containing protein C1486.03; TrEMBL-Plants: tr|I1LZN2|I1LZN2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0282900 LjG1.1_chr4 65483473 65491183 +
n.a. R3H domain protein; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp|Q8MSX1|ENC_DROME Protein encore; TrEMBL-Plants: tr|I1LBV3|I1LBV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0204000 LjG1.1_chr5 50468786 50473526 +
n.a. R3h domain containing protein, putative; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp|Q9DCB4|ARP21_MOUSE cAMP-regulated phosphoprotein 21; TrEMBL-Plants: tr|A0A0B2NZL5|A0A0B2NZL5_GLYSO R3H domain-containing protein 2; Found in the gene: LotjaGi5g1v0267500 LjG1.1_chr5 57915389 57933310 -
n.a. R3h domain containing protein, putative; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp|Q80TM6|R3HD2_MOUSE R3H domain-containing protein 2; TrEMBL-Plants: tr|G7I367|G7I367_MEDTR Single-stranded nucleic acid-binding protein R3H; Found in the gene: LotjaGi5g1v0267500 LjG1.1_chr5 57920859 57933304 -