Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002453
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 35 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.859s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0212479.1
n.a. PREDICTED: tubulin beta-2 chain-like [Glycine max] gi|356504309|ref|XP_003520939.1| chr0 107231785 107234164 -
2 domain predictions
4 GO terms
Lj1g3v4093380.1
n.a. PREDICTED: tubulin beta-1 chain-like [Glycine max] gi|356571899|ref|XP_003554108.1| chr1 48477799 48480580 +
2 domain predictions
4 GO terms
Lj2g3v0661570.1
n.a. beta-tubulin 16 [Salix arbutifolia] gi|460240332|gb|AGH08237.1| chr2 10708898 10710777 -
2 domain predictions
4 GO terms
Lj2g3v0661580.1
n.a. RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulingi|4415992|gb|AAD20179.1| beta-tubulin 2 [Eleusine indica] gi|8928425|sp|Q9ZPN9.1|TBB2_ELEIN chr2 10709141 10709800 -
2 domain predictions
4 GO terms
Lj4g3v0286260.1
n.a. PREDICTED: tubulin beta-3 chain-like [Cicer arietinum] gi|502141952|ref|XP_004504719.1| chr4 3513234 3518963 +
2 domain predictions
4 GO terms
Lj4g3v0286270.1
n.a. n.a. chr4 3518065 3518520 -
2 domain predictions
4 GO terms
Lj4g3v0286270.2
n.a. n.a. chr4 3518065 3518963 -
2 domain predictions
4 GO terms
Lj4g3v2951260.1
n.a. PREDICTED: tubulin beta-1 chain-like [Cicer arietinum] gi|502139309|ref|XP_004503723.1| chr4 39119527 39122014 -
2 domain predictions
4 GO terms
Lj4g3v2951260.2
n.a. PREDICTED: tubulin beta-1 chain-like [Cicer arietinum] gi|502139309|ref|XP_004503723.1| chr4 39119527 39123221 -
2 domain predictions
4 GO terms
Lj5g3v2013620.1
n.a. PREDICTED: tubulin beta-1 chain-like [Cicer arietinum] gi|502119269|ref|XP_004496560.1| chr5 28301676 28304250 -
2 domain predictions
4 GO terms
Lj6g3v1629640.1
n.a. tubulin beta chain [Lotus japonicus] gi|244539475|dbj|BAH82659.1| chr6 18371425 18374052 +
2 domain predictions
4 GO terms
LotjaGi1g1v0659300.1
n.a. Tubulin beta chain; TAIR: AT5G12250.1 beta-6 tubulin; Swiss-Prot: sp|P29514|TBB6_ARATH Tubulin beta-6 chain; TrEMBL-Plants: tr|G7L5V0|G7L5V0_MEDTR Tubulin beta chain; Found in the gene: LotjaGi1g1v0659300 LjG1.1_chr1 122037270 122040624 +
2 domain predictions
4 GO terms
LotjaGi1g1v0659300.2
n.a. Tubulin beta chain; TAIR: AT5G12250.1 beta-6 tubulin; Swiss-Prot: sp|Q43697|TBB5_MAIZE Tubulin beta-5 chain; TrEMBL-Plants: tr|B4FTM1|B4FTM1_MAIZE Tubulin beta chain; Found in the gene: LotjaGi1g1v0659300 LjG1.1_chr1 122037789 122040068 +
2 domain predictions
4 GO terms
LotjaGi1g1v0659300.3
n.a. Tubulin beta chain; TAIR: AT5G12250.1 beta-6 tubulin; Swiss-Prot: sp|P29514|TBB6_ARATH Tubulin beta-6 chain; TrEMBL-Plants: tr|G7L5V0|G7L5V0_MEDTR Tubulin beta chain; Found in the gene: LotjaGi1g1v0659300 LjG1.1_chr1 122037789 122040099 +
2 domain predictions
4 GO terms
LotjaGi1g1v0659300.4
n.a. Tubulin beta chain; TAIR: AT5G12250.1 beta-6 tubulin; Swiss-Prot: sp|P29514|TBB6_ARATH Tubulin beta-6 chain; TrEMBL-Plants: tr|G7L5V0|G7L5V0_MEDTR Tubulin beta chain; Found in the gene: LotjaGi1g1v0659300 LjG1.1_chr1 122037789 122040169 +
2 domain predictions
4 GO terms
LotjaGi3g1v0217800.1
n.a. Tubulin beta chain; TAIR: AT5G62690.1 tubulin beta chain 2; Swiss-Prot: sp|P12460|TBB2_SOYBN Tubulin beta-2 chain; TrEMBL-Plants: tr|I1JLU8|I1JLU8_SOYBN Tubulin beta chain; Found in the gene: LotjaGi3g1v0217800 LjG1.1_chr3 32851086 32854371 +
2 domain predictions
4 GO terms
LotjaGi3g1v0217800.2
n.a. Tubulin beta chain; TAIR: AT5G62690.1 tubulin beta chain 2; Swiss-Prot: sp|P12460|TBB2_SOYBN Tubulin beta-2 chain; TrEMBL-Plants: tr|I1JLU8|I1JLU8_SOYBN Tubulin beta chain; Found in the gene: LotjaGi3g1v0217800 LjG1.1_chr3 32851189 32853424 +
2 domain predictions
4 GO terms
LotjaGi3g1v0217800.3
n.a. Tubulin beta chain; TAIR: AT5G62690.1 tubulin beta chain 2; Swiss-Prot: sp|P37392|TBB1_LUPAL Tubulin beta-1 chain; TrEMBL-Plants: tr|Q8RU83|Q8RU83_GOSHI Tubulin beta chain; Found in the gene: LotjaGi3g1v0217800 LjG1.1_chr3 32851354 32853424 +
2 domain predictions
4 GO terms
LotjaGi3g1v0217800.4
n.a. Tubulin beta chain; TAIR: AT5G23860.1 tubulin beta 8; Swiss-Prot: sp|P12460|TBB2_SOYBN Tubulin beta-2 chain; TrEMBL-Plants: tr|I1JLU8|I1JLU8_SOYBN Tubulin beta chain; Found in the gene: LotjaGi3g1v0217800 LjG1.1_chr3 32851354 32853429 +
2 domain predictions
4 GO terms
LotjaGi4g1v0026900.1
n.a. Tubulin beta chain; TAIR: AT2G29550.1 tubulin beta-7 chain; Swiss-Prot: sp|Q9ZPP0|TBB1_ELEIN Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A067GIJ4|A0A067GIJ4_CITSI Tubulin beta chain; Found in the gene: LotjaGi4g1v0026900 LjG1.1_chr4 3263112 3274563 +
2 domain predictions
4 GO terms
LotjaGi4g1v0026900.2
n.a. Tubulin beta chain; TAIR: AT2G29550.1 tubulin beta-7 chain; Swiss-Prot: sp|Q9ZPP0|TBB1_ELEIN Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A067GIJ4|A0A067GIJ4_CITSI Tubulin beta chain; Found in the gene: LotjaGi4g1v0026900 LjG1.1_chr4 3271566 3274099 +
2 domain predictions
4 GO terms
LotjaGi4g1v0026900.3
n.a. Tubulin beta chain; TAIR: AT2G29550.1 tubulin beta-7 chain; Swiss-Prot: sp|Q9ZPP0|TBB1_ELEIN Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A067GIJ4|A0A067GIJ4_CITSI Tubulin beta chain; Found in the gene: LotjaGi4g1v0026900 LjG1.1_chr4 3271653 3274125 +
2 domain predictions
4 GO terms
LotjaGi4g1v0026900.4
n.a. Tubulin beta chain; TAIR: AT2G29550.1 tubulin beta-7 chain; Swiss-Prot: sp|Q9ZPP0|TBB1_ELEIN Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A067GIJ4|A0A067GIJ4_CITSI Tubulin beta chain; Found in the gene: LotjaGi4g1v0026900 LjG1.1_chr4 3271653 3274211 +
2 domain predictions
4 GO terms
LotjaGi4g1v0026900.5
n.a. Tubulin beta chain; TAIR: AT2G29550.1 tubulin beta-7 chain; Swiss-Prot: sp|Q9ZPP0|TBB1_ELEIN Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A067GIJ4|A0A067GIJ4_CITSI Tubulin beta chain; Found in the gene: LotjaGi4g1v0026900 LjG1.1_chr4 3271653 3274356 +
2 domain predictions
4 GO terms
LotjaGi4g1v0425600.1
n.a. Tubulin beta chain; TAIR: AT5G12250.1 beta-6 tubulin; Swiss-Prot: sp|P12459|TBB1_SOYBN Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A1J7HE29|A0A1J7HE29_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0425600 LjG1.1_chr4 80037806 80040705 -
2 domain predictions
4 GO terms
LotjaGi4g1v0425600.2
n.a. Tubulin beta chain; TAIR: AT5G12250.1 beta-6 tubulin; Swiss-Prot: sp|P12459|TBB1_SOYBN Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A1J7HE29|A0A1J7HE29_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0425600 LjG1.1_chr4 80037842 80040705 -
2 domain predictions
4 GO terms
LotjaGi4g1v0425600.3
n.a. Tubulin beta chain; TAIR: AT5G12250.1 beta-6 tubulin; Swiss-Prot: sp|P12459|TBB1_SOYBN Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A1J7HE29|A0A1J7HE29_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0425600 LjG1.1_chr4 80037842 80040854 -
2 domain predictions
4 GO terms
LotjaGi4g1v0464300.1
n.a. Tubulin beta chain; TAIR: AT5G12250.1 beta-6 tubulin; Swiss-Prot: sp|P18025|TBB1_MAIZE Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A151TK69|A0A151TK69_CAJCA Tubulin beta chain; Found in the gene: LotjaGi4g1v0464300 LjG1.1_chr4 83433826 83435447 +
2 domain predictions
4 GO terms
LotjaGi4g1v0464300.2
n.a. Tubulin beta chain; TAIR: AT5G12250.1 beta-6 tubulin; Swiss-Prot: sp|P18025|TBB1_MAIZE Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A151TK69|A0A151TK69_CAJCA Tubulin beta chain; Found in the gene: LotjaGi4g1v0464300 LjG1.1_chr4 83433914 83435494 +
2 domain predictions
4 GO terms
LotjaGi5g1v0005400.1
n.a. Tubulin beta chain; TAIR: AT1G20010.1 tubulin beta-5 chain; Swiss-Prot: sp|P18025|TBB1_MAIZE Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A0S3RAJ6|A0A0S3RAJ6_PHAAN Tubulin beta chain; Found in the gene: LotjaGi5g1v0005400 LjG1.1_chr5 1429364 1432800 +
2 domain predictions
4 GO terms
LotjaGi5g1v0300100.1
n.a. Tubulin beta chain; TAIR: AT5G23860.1 tubulin beta 8; Swiss-Prot: sp|P37392|TBB1_LUPAL Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A058ZXC7|A0A058ZXC7_EUCGR Tubulin beta chain; Found in the gene: LotjaGi5g1v0300100 LjG1.1_chr5 61735160 61739805 -
2 domain predictions
4 GO terms
LotjaGi5g1v0300100.2
n.a. Tubulin beta chain; TAIR: AT5G23860.1 tubulin beta 8; Swiss-Prot: sp|P37392|TBB1_LUPAL Tubulin beta-1 chain; TrEMBL-Plants: tr|A0A058ZXC7|A0A058ZXC7_EUCGR Tubulin beta chain; Found in the gene: LotjaGi5g1v0300100 LjG1.1_chr5 61737527 61739628 -
2 domain predictions
4 GO terms
LotjaGi5g1v0300100.3
n.a. Tubulin beta chain; TAIR: AT5G23860.1 tubulin beta 8; Swiss-Prot: sp|Q40106|TBB2_LUPAL Tubulin beta-2 chain; TrEMBL-Plants: tr|M5WZG9|M5WZG9_PRUPE Tubulin beta chain; Found in the gene: LotjaGi5g1v0300100 LjG1.1_chr5 61737641 61739628 -
2 domain predictions
4 GO terms
LotjaGi6g1v0268300.1
n.a. Tubulin beta chain; TAIR: AT5G23860.1 tubulin beta 8; Swiss-Prot: sp|Q40665|TBB3_ORYSJ Tubulin beta-3 chain; TrEMBL-Plants: tr|C5NU06|C5NU06_LOTJA Tubulin beta chain; Found in the gene: LotjaGi6g1v0268300 LjG1.1_chr6 58330571 58333802 +
2 domain predictions
4 GO terms
LotjaGi6g1v0268300.2
n.a. Tubulin beta chain; TAIR: AT5G23860.1 tubulin beta 8; Swiss-Prot: sp|Q40665|TBB3_ORYSJ Tubulin beta-3 chain; TrEMBL-Plants: tr|C5NU06|C5NU06_LOTJA Tubulin beta chain; Found in the gene: LotjaGi6g1v0268300 LjG1.1_chr6 58330866 58333177 +
2 domain predictions
4 GO terms