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IPR008546 is a VAN3-binding protein-like, auxin canalisation domain.
<p>This domain can be found at the N-terminal end of several plant proteins, including VAN3-binding protein from Arabidopsis thaliana (also known as FORKED1), a component of the auto-regulatory loop which enables auxin canalisation by recruitment of the PIN1 auxin efflux protein to the cell membrane [[cite:PUB00090780]]. This domain is frequently found on proteins containing [interpro:IPR013666] at the C terminus.</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Emb:CAB10253.1 isoform 1 [Theobroma cacao] gi|508713880|gb|EOY05777.1| | 8 | ||
– | PREDICTED: glycoprotein gp2-like [Cicer arietinum] gi|502109770|ref|XP_004493723.1| | 7 | ||
– | PREDICTED: glycoprotein gp2-like [Cicer arietinum] gi|502109770|ref|XP_004493723.1| | 10 | ||
– | 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 [Theobroma cacao] gi|508777046|gb|EOY24302.1| | 7 | ||
– | Double-strand-break repair protein rad21 [Theobroma cacao] gi|508784339|gb|EOY31595.1| | 7 | ||
– | Double-strand-break repair protein rad21 [Theobroma cacao] gi|508784339|gb|EOY31595.1| | 7 | ||
– | PREDICTED: glycoprotein gp2-like [Cicer arietinum] gi|502109770|ref|XP_004493723.1| | 10 | ||
– | Emb:CAB10253.1 isoform 1 [Theobroma cacao] gi|508713880|gb|EOY05777.1| | 14 | ||
– | Emb:CAB10253.1 isoform 1 [Theobroma cacao] gi|508713880|gb|EOY05777.1| | 9 | ||
– | Emb:CAB10253.1 isoform 1 [Theobroma cacao] gi|508713880|gb|EOY05777.1| | 9 | ||
– | Auxin canalization protein (DUF828); TAIR: AT4G32780.1 phosphoinositide binding protein; Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|K7KIW2|K7KIW2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0404000 | 17 | ||
– | Auxin canalization protein (DUF828); TAIR: AT4G32780.1 phosphoinositide binding protein; Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|K7KIW2|K7KIW2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0404000 | 17 | ||
– | Auxin canalization protein (DUF828); TAIR: AT3G63300.1 FORKED 1; Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|V7CW96|V7CW96_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0715900 | 8 | ||
– | Auxin canalization protein (DUF828); TAIR: AT3G63300.1 FORKED 1; Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|V7CW96|V7CW96_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0715900 | 8 | ||
– | Auxin canalization protein (DUF828); TAIR: AT4G17350.1 auxin canalization protein (DUF828); Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|V7CJ12|V7CJ12_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0421800 | 8 | ||
– | Auxin canalization protein (DUF828); TAIR: AT4G17350.1 auxin canalization protein (DUF828); Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|V7CJ12|V7CJ12_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0421800 | 8 | ||
– | Auxin canalization protein (DUF828); TAIR: AT4G17350.1 auxin canalization protein (DUF828); Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|I1K0R2|I1K0R2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0201900 | 8 | ||
– | Auxin canalization protein (DUF828); TAIR: AT5G57770.1 auxin canalization protein (DUF828); Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|A0A0B2QBW5|A0A0B2QBW5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi4g1v0294400 | 10 | ||
– | Auxin canalization protein (DUF828); TAIR: AT3G63300.1 FORKED 1; Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|V7BIA1|V7BIA1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0170700 | 11 | ||
– | Auxin canalization protein (DUF828); TAIR: AT3G22810.1 auxin canalization protein (DUF828); Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|A0A061EN43|A0A061EN43_THECC Emb:CAB10253.1 isoform 1; Found in the gene: LotjaGi5g1v0310900 | 10 | ||
– | Auxin canalization protein (DUF828); TAIR: AT3G22810.1 auxin canalization protein (DUF828); Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|A0A061EN43|A0A061EN43_THECC Emb:CAB10253.1 isoform 1; Found in the gene: LotjaGi5g1v0310900 | 9 | ||
– | Auxin canalization protein (DUF828); TAIR: AT3G22810.1 auxin canalization protein (DUF828); Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|A0A0S3SV61|A0A0S3SV61_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0002500 | 10 | ||
– | Auxin canalization protein (DUF828); TAIR: AT3G22810.1 auxin canalization protein (DUF828); Swiss-Prot: sp|Q8W4K5|VAB_ARATH VAN3-binding protein; TrEMBL-Plants: tr|A0A0S3SV61|A0A0S3SV61_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0002500 | 10 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 4.35 |