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IPR022581 is a Spt5 transcription elongation factor, N-terminal.
<p>This is the very acidic N-terminal domain of the early transcription elongation factor Spt5 [[cite:PUB00009700]]. The Spt5-Spt4 complex regulates early transcription elongation by RNA polymerase II and has an imputed role in pre-mRNA processing via its physical association with mRNA capping enzymes. The actual function of this N-terminal domain is not known although it is dispensable for binding to Spt4 [[cite:PUB00053692]], nor is it essential for RNA polymerase II binding [[cite:PUB00053750]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Global transcription factor group [Medicago truncatula] gi|357463691|ref|XP_003602127.1| | 17 | ||
| – | Global transcription factor group [Medicago truncatula] gi|357463691|ref|XP_003602127.1| | 7 | ||
| – | Putative transcription elongation factor SPT5-1-like protein [Aegilops tauschii] gi|475569805|gb|EMT15857.1| | 18 | ||
| – | Putative transcription elongation factor SPT5-1-like protein [Aegilops tauschii] gi|475569805|gb|EMT15857.1| | 18 | ||
| – | Transcription elongation factor SPT5; TAIR: AT4G08350.1 global transcription factor group A2; Swiss-Prot: sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1; TrEMBL-Plants: tr|I1JYX6|I1JYX6_SOYBN Transcription elongation factor SPT5; Found in the gene: LotjaGi1g1v0273000 | 37 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 20.00 |