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IPR036735 is a NusG, N-terminal domain superfamily.
<p>This is the N-terminal domain superfamily of transcription termination/antitermination protein NusG, which is involved in transcription elongation, termination and antitermination. It also occurs at the N-terminal of transcription antitermination protein RfaH and in the transcription elongation factor Spt5 [[cite:PUB00053827], [cite:PUB00100966]]. This domain has a ferredoxin-like fold, which consists of an α+β sandwich with antiparallel β-sheet.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Transcription elongation factor SPT5; TAIR: AT4G08350.1 global transcription factor group A2; Swiss-Prot: sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1; TrEMBL-Plants: tr|I1JYX6|I1JYX6_SOYBN Transcription elongation factor SPT5; Found in the gene: LotjaGi1g1v0273000 | 37 | ||
– | Transcription termination/antitermination protein NusG; TAIR: AT3G09210.1 plastid transcriptionally active 13; Swiss-Prot: sp|Q9HWC4|NUSG_PSEAE Transcription termination/antitermination protein NusG; TrEMBL-Plants: tr|A0A151TKX6|A0A151TKX6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0218100 | 20 | ||
– | Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC | 18 | ||
– | Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC | 18 | ||
– | Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC | 18 | ||
– | Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC | 18 | ||
– | Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC | 18 | ||
– | Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC | 18 | ||
– | Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC | 18 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 11.11 |