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IPR006645

Source: InterPro

Description

IPR006645 is a NusG-like, N-terminal.

<p>This is the N-terminal domain of transcription termination/antitermination protein NusG, which is involved in transcription elongation, termination and antitermination. It also occurs at the N-terminal of transcription antitermination protein RfaH and in the transcription elongation factor Spt5 [[cite:PUB00053827], [cite:PUB00100966], [cite:PUB00100967], [cite:PUB00092162]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Lj0g3v0139769.1
– Global transcription factor group [Medicago truncatula] gi|357463691|ref|XP_003602127.1|
Domains
17
Lj0g3v0258039.1
– Putative transcription elongation factor SPT5-1-like protein [Aegilops tauschii] gi|475569805|gb|EMT15857.1|
Domains
18
Lj0g3v0333779.1
– Plastid transcriptionally active isoform 1 [Theobroma cacao] gi|508715430|gb|EOY07327.1|
Domains
18
Lj0g3v0364329.1
– Putative transcription elongation factor SPT5-1-like protein [Aegilops tauschii] gi|475569805|gb|EMT15857.1|
Domains
18
LotjaGi1g1v0273000.1
– Transcription elongation factor SPT5; TAIR: AT4G08350.1 global transcription factor group A2; Swiss-Prot: sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1; TrEMBL-Plants: tr|I1JYX6|I1JYX6_SOYBN Transcription elongation factor SPT5; Found in the gene: LotjaGi1g1v0273000
Domains
37
LotjaGi3g1v0218100.1
– Transcription termination/antitermination protein NusG; TAIR: AT3G09210.1 plastid transcriptionally active 13; Swiss-Prot: sp|Q9HWC4|NUSG_PSEAE Transcription termination/antitermination protein NusG; TrEMBL-Plants: tr|A0A151TKX6|A0A151TKX6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0218100
Domains
20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67