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PF03439

Source: Pfam

Description

Early transcription elongation factor of RNA pol II, NGN section

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj0g3v0139769.1
– Global transcription factor group [Medicago truncatula] gi|357463691|ref|XP_003602127.1|
Domains
17
Lj0g3v0206359.1
– Global transcription factor group [Medicago truncatula] gi|357463691|ref|XP_003602127.1|
Domains
7
Lj0g3v0258039.1
– Putative transcription elongation factor SPT5-1-like protein [Aegilops tauschii] gi|475569805|gb|EMT15857.1|
Domains
18
Lj0g3v0364329.1
– Putative transcription elongation factor SPT5-1-like protein [Aegilops tauschii] gi|475569805|gb|EMT15857.1|
Domains
18
Lj5g3v2220290.1
– PREDICTED: transcription elongation factor SPT5-like [Fragaria vesca subsp]. vesca] gi|470146293|ref|XP_004308761.1|
Domains
10
LotjaGi1g1v0273000.1
– Transcription elongation factor SPT5; TAIR: AT4G08350.1 global transcription factor group A2; Swiss-Prot: sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1; TrEMBL-Plants: tr|I1JYX6|I1JYX6_SOYBN Transcription elongation factor SPT5; Found in the gene: LotjaGi1g1v0273000
Domains
37
LotjaGi5g1v0342300_LC.1
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.2
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.3
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.4
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.5
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.6
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18
LotjaGi5g1v0342300_LC.7
– Transcription elongation factor Spt5-like protein, putative; TAIR: AT5G04290.2 kow domain-containing transcription factor 1; Swiss-Prot: sp|F4JW79|RDM3_ARATH Protein RNA-directed DNA methylation 3; TrEMBL-Plants: tr|A0A072VS63|A0A072VS63_MEDTR Transcription elongation factor Spt5-like protein, putative; Found in the gene: LotjaGi5g1v0342300_LC
Domains
18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 7.69