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Transcription factor TFIIB repeat
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | TBP-class protein binding | Interacting selectively and non-covalently with a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs). |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: transcription initiation factor IIB-like [Fragaria vesca subsp]. vesca] gi|470137151|ref|XP_004304334.1| | 13 | ||
| – | PREDICTED: transcription factor IIIB 90 kDa subunit-like [Cicer arietinum] gi|502091837|ref|XP_004489648.1| | 17 | ||
| – | PREDICTED: transcription initiation factor IIB-like [Fragaria vesca subsp]. vesca] gi|470137151|ref|XP_004304334.1| | 13 | ||
| – | PREDICTED: transcription initiation factor IIB 7-like isoform X2 [Cicer arietinum] gi|502161095|ref|XP_004512023.1| | 12 | ||
| – | PREDICTED: transcription initiation factor IIB 7-like isoform X2 [Cicer arietinum] gi|502161095|ref|XP_004512023.1| | 11 | ||
| – | PREDICTED: transcription initiation factor IIB-like [Fragaria vesca subsp]. vesca] gi|470137151|ref|XP_004304334.1| | 18 | ||
| – | PREDICTED: transcription factor IIIB 90 kDa subunit-like [Cicer arietinum] gi|502091837|ref|XP_004489648.1| | 17 | ||
| – | Transcription initiation factor IIB; TAIR: AT3G10330.1 Cyclin-like family protein; Swiss-Prot: sp|P48513|TF2B_SOYBN Transcription initiation factor IIB; TrEMBL-Plants: tr|A0A151U2X6|A0A151U2X6_CAJCA Transcription initiation factor IIB; Found in the gene: LotjaGi1g1v0671300 | 19 | ||
| – | Transcription initiation factor IIB; TAIR: AT3G10330.1 Cyclin-like family protein; Swiss-Prot: sp|P48513|TF2B_SOYBN Transcription initiation factor IIB; TrEMBL-Plants: tr|A0A151U2X6|A0A151U2X6_CAJCA Transcription initiation factor IIB; Found in the gene: LotjaGi1g1v0671300 | 14 | ||
| – | Transcription factor, putative; TAIR: AT3G09360.1 Cyclin/Brf1-like TBP-binding protein; Swiss-Prot: sp|Q8CFK2|TF3B_MOUSE Transcription factor IIIB 90 kDa subunit; TrEMBL-Plants: tr|A0A1J7FQ67|A0A1J7FQ67_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0094100 | 19 | ||
| – | Transcription initiation factor IIB; TAIR: AT4G36650.1 plant-specific TFIIB-related protein; Swiss-Prot: sp|O23215|PBRP1_ARATH Plant-specific TFIIB-related protein 1; TrEMBL-Plants: tr|I1J8V2|I1J8V2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0391100 | 13 | ||
| – | Transcription initiation factor IIB; TAIR: AT3G10330.1 Cyclin-like family protein; Swiss-Prot: sp|Q9SS44|TF2B2_ARATH Transcription initiation factor IIB-2; TrEMBL-Plants: tr|A0A151U2X6|A0A151U2X6_CAJCA Transcription initiation factor IIB; Found in the gene: LotjaGi5g1v0136500 | 19 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd00043 | CDD | 1 | 8.33 |