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IPR011054

Source: InterPro

Description

IPR011054 is a Rudiment single hybrid motif.

<p>The rudiment single hybrid motif has a β-barrel sandwich hybrid motif, consisting of a sandwich of half-barrel shaped β-sheets. This motif is found in the small domain of cytochrome f [[cite:PUB00014227]], as well as in the C-terminal domain of the biotin carboxylase subunit of acetyl-CoA carboxylase [[cite:PUB00014226]], and its family members, such as glycinamide ribonucleotide synthetase C-terminal domain [[cite:PUB00014228]], N5-carboxyaminoimidazole ribonucleotide synthetase PurK C-terminal domain [[cite:PUB00007904]], and glycinamide ribonucleotide transformylase PurT C-terminal domain [[cite:PUB00014229]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 17

Transcript Name Description Predicted domains Domain count
Lj0g3v0078859.1
– PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Glycine max] gi|356535191|ref|XP_003536132.1|
Domains
14
Lj0g3v0078859.2
– PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Glycine max] gi|356535191|ref|XP_003536132.1|
Domains
30
Lj1g3v4093410.1
– Cytochrome f [Lotus japonicus] gi|13518451|ref|NP_084811.1|
Domains
12
Lj4g3v3015020.1
– PREDICTED: biotin carboxylase 1, chloroplastic-like [Cicer arietinum] gi|502138858|ref|XP_004503555.1|
Domains
26
Lj5g3v1003320.1
– PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like isoform X2 [Cicer arietinum] gi|502115337|ref|XP_004495179.1|
Domains
33
Lj5g3v2263910.1
– PREDICTED: phosphoribosylamine--glycine ligase, chloroplastic-like isoform X2 [Cicer arietinum] gi|502123844|ref|XP_004498282.1|
Domains
28
LotjaGi1g1v0246300.2
– Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300
Domains
46
LotjaGi1g1v0246300.3
– Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300
Domains
46
LotjaGi1g1v0246300.4
– Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|I1JVH6|I1JVH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300
Domains
46
LotjaGi1g1v0246300.5
– Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300
Domains
46
LotjaGi1g1v0246300.6
– Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300
Domains
32
LotjaGi1g1v0659500_LC.1
– Cytochrome f; TAIR: ATCG00540.1 photosynthetic electron transfer A (ChrC); Swiss-Prot: sp|Q9BBR8|CYF_LOTJA Cytochrome f; TrEMBL-Plants: tr|A0A023INB7|A0A023INB7_LENCU Cytochrome f; Found in the gene: LotjaGi1g1v0659500_LC
Domains
12
LotjaGi4g1v0439600.1
– Biotin carboxylase; TAIR: AT5G35360.1 acetyl Co-enzyme a carboxylase biotin carboxylase subunit; Swiss-Prot: sp|B9HBA8|ACCC1_POPTR Biotin carboxylase 1, chloroplastic; TrEMBL-Plants: tr|O23960|O23960_SOYBN Acetyl-CoA carboxylase; Found in the gene: LotjaGi4g1v0439600
Domains
23
LotjaGi4g1v0439600.2
– Biotin carboxylase; TAIR: AT5G35360.1 acetyl Co-enzyme a carboxylase biotin carboxylase subunit; Swiss-Prot: sp|B9HBA8|ACCC1_POPTR Biotin carboxylase 1, chloroplastic; TrEMBL-Plants: tr|O23960|O23960_SOYBN Acetyl-CoA carboxylase; Found in the gene: LotjaGi4g1v0439600
Domains
23
LotjaGi5g1v0170200.1
– Acetyl-CoA carboxylase, putative; TAIR: AT1G03090.2 methylcrotonyl-CoA carboxylase alpha chain; Swiss-Prot: sp|Q42777|MCCA_SOYBN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; TrEMBL-Plants: tr|A0A151QXF8|A0A151QXF8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0170200
Domains
30
LotjaGi5g1v0211000.1
– Formate-dependent phosphoribosylglycinamide formyltransferase; TAIR: AT2G37690.1 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase; Swiss-Prot: sp|P55195|PUR6_VIGAC Phosphoribosylaminoimidazole carboxylase, chloroplastic; TrEMBL-Plants: tr|K7LJS8|K7LJS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0211000
Domains
32
LotjaGi5g1v0354900.1
– Phosphoribosylamine-glycine ligase; TAIR: AT1G09830.1 Glycinamide ribonucleotide (GAR) synthetase; Swiss-Prot: sp|P52420|PUR2_ARATH Phosphoribosylamine--glycine ligase, chloroplastic; TrEMBL-Plants: tr|K7LJM6|K7LJM6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0354900
Domains
28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TIGR00877 TIGRFAM 1 5.88